CaUC11G212020 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G212020
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	immediate early response 3-interacting protein 1-like
Location	Ciama_Chr11: 24791324 .. 24792283 (+)
RNA-Seq Expression	CaUC11G212020
Synteny	CaUC11G212020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTGTGGACACTACTAGAGGGTTGTCTGCTTCTTGCTAACGCGCTGGCAATTCTGAATGAAGATCGCTTTCTTGCTCCTCGAGGATTGAACTTCTCTGAATTCTCAGGAGGCAGAACAAAGTCATTCAAGGGGCAGCTTATTGGCCTTATCTACGCAACACAATATTTAAGAGTTCCTCTCATAATGCTAAATGCAATCTGTATCTTTGTAAAGTTAGTATCTGGATGAGGAGCTCTGCTGAGGTGATGAACTCTGGAAAAATATATCTACCATATCATTCTTGTTTTCTCTATTGTAATGTAACGATGGCTGCTTTAACTTCGGAATTTGTGGGGAACGCATGTTGCACCAATAGCCAAATTCTTTTGGGACATGTCAAGGTAGGACAGAAGATATGGCTACTCTTTAATTTTCTTTTTTGATGTGAGATATGGTTAGCTTGGTTTCATATTGGTTTTGCATCAAGATTACACTATAGCATGATTTCTTATATGCTTGTCATATTTTCCGGGACATCCAATAATTACTTGTTCTTATTATCATCTTTTTCTTTTTATATATTTTTTCAAAAAAAGTGAAAAAAAAAAAAAAAAAAATGGAAGTGAACTTCCTGTTCTTTCTGTTGGGTAATATTAAAAGAAATGTTGTCCATCTACGTAGTCATTAATCACATTCAATCATTAAAATCTTATCTTTCATTATATAAAATTGTTATTATAATCAATATCATATTAGTAACTAGTTATATATGAGACTTTAGCTTATTTGAGTATACCTAATTTGGTTAAGGTGTTATAACTTTGACCAAATTGTTGGATGTTTAATTTCTTACAACGAATCTACTACATTTATTTAGATTTTATTTAGTAATGTTTTCATTTTTTGTTTTAAAACTTATTTCCACTTTCGTTGCTATGGTTTTCATTTTTTTTTTTATCTTTTTTAAGAAAATAA

mRNA sequence

ATGGGTCTGTGGACACTACTAGAGGGTTGTCTGCTTCTTGCTAACGCGCTGGCAATTCTGAATGAAGATCGCTTTCTTGCTCCTCGAGGATTGAACTTCTCTGAATTCTCAGGAGGCAGAACAAAGTCATTCAAGGGGCAGCTTATTGGCCTTATCTACGCAACACAATATTTAAGAGTTCCTCTCATAATGCTAAATGCAATCTGTATCTTTGTAAAAAAATAA

Coding sequence (CDS)

ATGGGTCTGTGGACACTACTAGAGGGTTGTCTGCTTCTTGCTAACGCGCTGGCAATTCTGAATGAAGATCGCTTTCTTGCTCCTCGAGGATTGAACTTCTCTGAATTCTCAGGAGGCAGAACAAAGTCATTCAAGGGGCAGCTTATTGGCCTTATCTACGCAACACAATATTTAAGAGTTCCTCTCATAATGCTAAATGCAATCTGTATCTTTGTAAAAAAATAA

Protein sequence

MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRVPLIMLNAICIFVKK

Homology

[Close]

BLAST of CaUC11G212020 vs. NCBI nr
Match: XP_008441413.1 (PREDICTED: immediate early response 3-interacting protein 1-like [Cucumis melo] >XP_008441414.1 PREDICTED: immediate early response 3-interacting protein 1-like [Cucumis melo] >XP_008441415.1 PREDICTED: immediate early response 3-interacting protein 1-like [Cucumis melo])

HSP 1 Score: 145.2 bits (365), Expect = 2.2e-31
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVK 74
          PLIMLNAICIFVK
Sbjct: 61 PLIMLNAICIFVK 73

[Close]

BLAST of CaUC11G212020 vs. NCBI nr
Match: XP_031743934.1 (immediate early response 3-interacting protein 1 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 2.2e-31
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVK 74
          PLIMLNAICIFVK
Sbjct: 61 PLIMLNAICIFVK 73

[Close]

BLAST of CaUC11G212020 vs. NCBI nr
Match: XP_022134292.1 (immediate early response 3-interacting protein 1-like [Momordica charantia] >XP_022134293.1 immediate early response 3-interacting protein 1-like [Momordica charantia] >XP_038892190.1 immediate early response 3-interacting protein 1-like [Benincasa hispida] >XP_038892191.1 immediate early response 3-interacting protein 1-like [Benincasa hispida] >XP_038892192.1 immediate early response 3-interacting protein 1-like [Benincasa hispida] >XP_038892193.1 immediate early response 3-interacting protein 1-like [Benincasa hispida] >XP_038892194.1 immediate early response 3-interacting protein 1-like [Benincasa hispida])

HSP 1 Score: 143.3 bits (360), Expect = 8.5e-31
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGL+FSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVK 74
          PLIMLNAICIFVK
Sbjct: 61 PLIMLNAICIFVK 73

[Close]

BLAST of CaUC11G212020 vs. NCBI nr
Match: XP_022952849.1 (immediate early response 3-interacting protein 1-like [Cucurbita moschata])

HSP 1 Score: 138.7 bits (348), Expect = 2.1e-29
Identity = 69/73 (94.52%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLA RGL+FSEFSGGRTKSFKGQLIGL+YATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLARRGLSFSEFSGGRTKSFKGQLIGLVYATQYLRV 60

Query: 61 PLIMLNAICIFVK 74
          PLIMLNA+CIFVK
Sbjct: 61 PLIMLNALCIFVK 73

[Close]

BLAST of CaUC11G212020 vs. NCBI nr
Match: KAG6602638.1 (Guanylyl cyclase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 138.7 bits (348), Expect = 2.1e-29
Identity = 69/73 (94.52%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLA RGL+FSEFSGGRTKSFKGQLIGL+YATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLARRGLSFSEFSGGRTKSFKGQLIGLVYATQYLRV 60

Query: 61 PLIMLNAICIFVK 74
          PLIMLNA+CIFVK
Sbjct: 61 PLIMLNALCIFVK 73

[Close]

BLAST of CaUC11G212020 vs. ExPASy Swiss-Prot
Match: Q3B8G7 (Immediate early response 3-interacting protein 1 OS=Xenopus laevis OX=8355 GN=ier3ip1 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.1e-04
Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L+TLL+  LL  NA+A+L+E+RFL+  G       G  G     K QL+ LI + +  +R
Sbjct: 5  LYTLLQAALLCVNAVAVLHEERFLSKIGWGVDHGIGGFGEEPGMKSQLMNLIRSVRTVMR 64

Query: 63 VPLIMLNAICI 71
          VPLI++N++ I
Sbjct: 65 VPLIIVNSVTI 75

[Close]

BLAST of CaUC11G212020 vs. ExPASy Swiss-Prot
Match: Q4VBI2 (Immediate early response 3-interacting protein 1 OS=Danio rerio OX=7955 GN=ier3ip1 PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.4e-04
Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L+ L++  +L  NA+A+L+E+RFL+  G    +  G  G     K QL+ LI + +  +R
Sbjct: 5  LYALIQTAILFTNAIAVLHEERFLSKIGWGAEQGVGGFGDDPGIKAQLLNLIRSVRTVMR 64

Query: 63 VPLIMLNAICI 71
          VPLI +N++CI
Sbjct: 65 VPLIAVNSVCI 75

[Close]

BLAST of CaUC11G212020 vs. ExPASy Swiss-Prot
Match: Q1JQC2 (Immediate early response 3-interacting protein 1 OS=Bos taurus OX=9913 GN=IER3IP1 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.4e-04
Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L++LL+  LL  NA+A+L+E+RFL   G    +  G  G     K QL+ LI + +  +R
Sbjct: 5  LYSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVRTVMR 64

Query: 63 VPLIMLNAICI 71
          VPLI++N+I I
Sbjct: 65 VPLIIVNSIAI 75

[Close]

BLAST of CaUC11G212020 vs. ExPASy Swiss-Prot
Match: Q9Y5U9 (Immediate early response 3-interacting protein 1 OS=Homo sapiens OX=9606 GN=IER3IP1 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.4e-04
Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L++LL+  LL  NA+A+L+E+RFL   G    +  G  G     K QL+ LI + +  +R
Sbjct: 5  LYSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVRTVMR 64

Query: 63 VPLIMLNAICI 71
          VPLI++N+I I
Sbjct: 65 VPLIIVNSIAI 75

[Close]

BLAST of CaUC11G212020 vs. ExPASy Swiss-Prot
Match: P85007 (Immediate early response 3-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Ier3ip1 PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 4.1e-04
Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L++L++  LL  NA+A+L+E+RFL   G    +  G  G     K QL+ LI + +  +R
Sbjct: 5  LYSLMQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLLNLIRSVRTVMR 64

Query: 63 VPLIMLNAICI 71
          VPLI++N+I I
Sbjct: 65 VPLIIVNSITI 75

[Close]

BLAST of CaUC11G212020 vs. ExPASy TrEMBL
Match: A0A1S3B419 (immediate early response 3-interacting protein 1-like OS=Cucumis melo OX=3656 GN=LOC103485539 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVK 74
          PLIMLNAICIFVK
Sbjct: 61 PLIMLNAICIFVK 73

[Close]

BLAST of CaUC11G212020 vs. ExPASy TrEMBL
Match: A0A0A0KBI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009360 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVK 74
          PLIMLNAICIFVK
Sbjct: 61 PLIMLNAICIFVK 73

[Close]

BLAST of CaUC11G212020 vs. ExPASy TrEMBL
Match: A0A6J1C1M0 (immediate early response 3-interacting protein 1-like OS=Momordica charantia OX=3673 GN=LOC111006591 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.1e-31
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGL+FSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVK 74
          PLIMLNAICIFVK
Sbjct: 61 PLIMLNAICIFVK 73

[Close]

BLAST of CaUC11G212020 vs. ExPASy TrEMBL
Match: A0A6J1GMX2 (immediate early response 3-interacting protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455413 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.0e-29
Identity = 69/73 (94.52%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLA RGL+FSEFSGGRTKSFKGQLIGL+YATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLARRGLSFSEFSGGRTKSFKGQLIGLVYATQYLRV 60

Query: 61 PLIMLNAICIFVK 74
          PLIMLNA+CIFVK
Sbjct: 61 PLIMLNALCIFVK 73

[Close]

BLAST of CaUC11G212020 vs. ExPASy TrEMBL
Match: A0A6J1JNY1 (immediate early response 3-interacting protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111487030 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.0e-29
Identity = 68/73 (93.15%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLA RGL+FSEFSGGRTKS KGQLIGL+YATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLARRGLSFSEFSGGRTKSLKGQLIGLVYATQYLRV 60

Query: 61 PLIMLNAICIFVK 74
          PLIMLNA+CIFVK
Sbjct: 61 PLIMLNALCIFVK 73

[Close]

BLAST of CaUC11G212020 vs. TAIR 10
Match: AT2G37975.1 (Yos1-like protein )

HSP 1 Score: 85.9 bits (211), Expect = 1.5e-17
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEF-SGGRTKSFKGQLIGLIYATQYLR 60
          MG WTL+EG LL ANALAILNEDRFLAP+G   +E    G+  S KGQ+IGLI+A  Y+R
Sbjct: 1  MGFWTLMEGLLLFANALAILNEDRFLAPKGWTLAELHQTGKRNSLKGQIIGLIHACHYMR 60

Query: 61 VPLIMLNAICIFVK 74
          +PL++ N I I  K
Sbjct: 61 LPLMLFNLIVIVFK 74

[Close]

BLAST of CaUC11G212020 vs. TAIR 10
Match: AT3G54085.1 (Yos1-like protein )

HSP 1 Score: 83.2 bits (204), Expect = 9.7e-17
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEF-SGGRTKSFKGQLIGLIYATQYLR 60
          MG WTLL+G LL ANALAILNEDRFL PRG    E     R  S KGQ+IGLI+A QY+R
Sbjct: 1  MGFWTLLKGLLLFANALAILNEDRFLVPRGWTLGELHQTDRRNSPKGQIIGLIHACQYMR 60

Query: 61 VPLIMLNAICIFVK 74
          +PL+++N   I +K
Sbjct: 61 LPLMLINTAVIVLK 74

[Close]

BLAST of CaUC11G212020 vs. TAIR 10
Match: AT3G54085.2 (Yos1-like protein )

HSP 1 Score: 83.2 bits (204), Expect = 9.7e-17
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 0


Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEF-SGGRTKSFKGQLIGLIYATQYLR 60
          MG WTLL+G LL ANALAILNEDRFL PRG    E     R  S KGQ+IGLI+A QY+R
Sbjct: 1  MGFWTLLKGLLLFANALAILNEDRFLVPRGWTLGELHQTDRRNSPKGQIIGLIHACQYMR 60

Query: 61 VPLIMLNAICIFVK 74
          +PL+++N   I +K
Sbjct: 61 LPLMLINTAVIVLK 74

The following BLAST results are available for this feature:

BLAST of CaUC11G212020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441413.1	2.2e-31	100.00	PREDICTED: immediate early response 3-interacting protein 1-like [Cucumis melo] ...	[more]
XP_031743934.1	2.2e-31	100.00	immediate early response 3-interacting protein 1 [Cucumis sativus]	[more]
XP_022134292.1	8.5e-31	98.63	immediate early response 3-interacting protein 1-like [Momordica charantia] >XP_...	[more]
XP_022952849.1	2.1e-29	94.52	immediate early response 3-interacting protein 1-like [Cucurbita moschata]	[more]
KAG6602638.1	2.1e-29	94.52	Guanylyl cyclase 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CaUC11G212020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3B8G7	1.1e-04	40.85	Immediate early response 3-interacting protein 1 OS=Xenopus laevis OX=8355 GN=ie...	[more]
Q4VBI2	1.4e-04	38.03	Immediate early response 3-interacting protein 1 OS=Danio rerio OX=7955 GN=ier3i...	[more]
Q1JQC2	2.4e-04	40.85	Immediate early response 3-interacting protein 1 OS=Bos taurus OX=9913 GN=IER3IP...	[more]
Q9Y5U9	2.4e-04	40.85	Immediate early response 3-interacting protein 1 OS=Homo sapiens OX=9606 GN=IER3...	[more]
P85007	4.1e-04	39.44	Immediate early response 3-interacting protein 1 OS=Rattus norvegicus OX=10116 G...	[more]

BLAST of CaUC11G212020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B419	1.1e-31	100.00	immediate early response 3-interacting protein 1-like OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KBI3	1.1e-31	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009360 PE=3 SV=1	[more]
A0A6J1C1M0	4.1e-31	98.63	immediate early response 3-interacting protein 1-like OS=Momordica charantia OX=...	[more]
A0A6J1GMX2	1.0e-29	94.52	immediate early response 3-interacting protein 1-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1JNY1	5.0e-29	93.15	immediate early response 3-interacting protein 1-like OS=Cucurbita maxima OX=366...	[more]

BLAST of CaUC11G212020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37975.1	1.5e-17	59.46	Yos1-like protein	[more]
AT3G54085.1	9.7e-17	59.46	Yos1-like protein	[more]
AT3G54085.2	9.7e-17	59.46	Yos1-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013880	Yos1-like	PFAM	PF08571	Yos1	coord: 3..73 e-value: 4.0E-21 score: 75.1
IPR013880	Yos1-like	PANTHER	PTHR15858	UNCHARACTERIZED	coord: 1..73
None	No IPR available	PANTHER	PTHR15858:SF4	YOS1-LIKE PROTEIN	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G212020.1	CaUC11G212020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0030134	COPII-coated ER to Golgi transport vesicle
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0030173	integral component of Golgi membrane