CaUC11G211990 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGGATTTCACACACAAAGTAGGGGCAACTAGTTATAGTATAAAAATGGGGTTTGGGAAGCCATAATTCTTCACAATCCAATTGAATTAGAAAAGAAGAAGAAGAAAGAAATGGAGTGTTCAAGAAAATACAGTTGGTTTGTGGTATTTCTTGCAATGTTTATTGTTGGTACAAAGTGTGGGCATGTTGAATCAAAGGGTGAGTGTGCCCCATCTACACCTGATAGAGAGGCCTTTAAAATGATGCCATGCATGAGTGCTTCAAAAGATGAAGAATATCCAGTTTCCCAAAGATGTTGTGATCAAGTCAGGAAATTAGGTCAAAGCACAAGCTGTCTTTGTGCTGTTATGTTGTCCAAAACAGCTGAATTGGTTGGATCAAAGCCTCAAATTGCTATTACAATTCCAAAGCGTTGTAACATTGTTGAACGCCCCGTTGGCTACAACTGTGGAGGTTTCTACTATCATTAACTCAACCTTTCATATATATATATATTTTTTTTTAAAAAAAAAAAAAATTCTTTCCCTTTTCGTTTTTCTTGTGAAATAACATTTCCGAGTTTTGAGTTTAATTTGTATTATTGGTCCTAGGTTTTAAAATAGTTAGGGTAATTGCTTTAGATGTCAAAACTATTTGAAATATTTTTGAAGATAGCAAAATGTCAATGTCTATGGGTGATATATGATAGTAGTCTACCACTGATAGATAATGATATTTTGCTATATTTGTAAATATTTTTATTCATGTTGCTATATTTGAAAACAACCCTTTAAAATATTATACATATACCATTGAGTTTTGAGTTTAATCACGATTTTGTTCATATGTTTCCAAACGATACATTTTAACACTTGAGTTTTCGTATTTGTTTTCATTTCAGTGTTGAATTTCAAAGACTTACACTATTTTATGGTTGATTTTTCATTAAATACATACCTTTTATTGTTTCGTTAATTTCTATCCATTAATTTTAAGGATTCAAATAATTTTCATTCATTTTTATTTACTATTAAAATTAGTTAAAACTTTTAAATTGGGATTGTTTTAAATTATTTATTTGAAAGTTAATGCTAAAAATCAAAAGTGAAACTTAGAGGCAAAATTGTAAACTATTAAGACCATGAAAACTAATTAACTCCTAATTTAAGGGTAAAATTGTAATTTTAAAAAATTAAGAAAGAAAAAAAAAATTCAAAAGTAATGAATGTAATATCAACAAATAGAAATTAAATTTAAAACTTACGTATCAAAATACACTCTTACTTTTTAGGGTAAATTACTAAAGTCATCTCTAAATTATGATGTTAGTTGTAATTATATCTTTAAATTTTTTATTTTAAAAACTAATCCATCAAACTTATATAATTGTTAAAATTTGGTCAAATTAGACCTTCAAACTTACATAATTGTATAAATTTGAACATTTGTATAAGTTTGAGGGTTCAATTTTACAATTGGAAGTTTGAGAGTATAATTGCAACTAACCGCACAATTATCATACTTCAAATGTTTTTTTTTTAATTTGCCCTACTTTTTAATTATTAGTAAAGGAAAAAGAGGATATTATTCTTTTTTATCTTAAACCTGTGTCCACTATTATGTTTAGTTTCAAAATAAAGAGAGTTGTGAATTTTATTTTTGCATTTTGTAGGTTATATACTACCTTGATCAAAGAAAGGAGTAAGGTGCATTCTGTGGGCACCAAATGTTGGATGTTTAAGGGGGAAAATATTTGTGTTTCTTGTAAATCTATAGTGACCTTCGCTCACTTATGTAATGAATAAAACCATCTTACGTGCTTCTTCTTCATATCTCTCTCTCCCCCTATATATAAATAATACCTTTGTTTTTATTAGAAATTCTAAAGGATTTTCACTTTAACAATAGTTTTGAAAGGTTTATAAAGTCATCAAAAACCAAGAAACCTTTGTAATGATATTTTATGTATCAATAATTTAGCTTATTAATTAAGAATGAATTTGTCAAATAAAATAGTGTG TGTGGATTTCACACACAAAGTAGGGGCAACTAGTTATAGTATAAAAATGGGGTTTGGGAAGCCATAATTCTTCACAATCCAATTGAATTAGAAAAGAAGAAGAAGAAAGAAATGGAGTGTTCAAGAAAATACAGTTGGTTTGTGGTATTTCTTGCAATGTTTATTGTTGGTACAAAGTGTGGGCATGTTGAATCAAAGGGTGAGTGTGCCCCATCTACACCTGATAGAGAGGCCTTTAAAATGATGCCATGCATGAGTGCTTCAAAAGATGAAGAATATCCAGTTTCCCAAAGATGTTGTGATCAAGTCAGGAAATTAGGTCAAAGCACAAGCTGTCTTTGTGCTGTTATGTTGTCCAAAACAGCTGAATTGGTTGGATCAAAGCCTCAAATTGCTATTACAATTCCAAAGCGTTGTAACATTGTTGAACGCCCCGTTGGCTACAACTGTGGAGGTTATATACTACCTTGATCAAAGAAAGGAGTAAGGTGCATTCTGTGGGCACCAAATGTTGGATGTTTAAGGGGGAAAATATTTGTGTTTCTTGTAAATCTATAGTGACCTTCGCTCACTTATGTAATGAATAAAACCATCTTACGTGCTTCTTCTTCATATCTCTCTCTCCCCCTATATATAAATAATACCTTTGTTTTTATTAGAAATTCTAAAGGATTTTCACTTTAACAATAGTTTTGAAAGGTTTATAAAGTCATCAAAAACCAAGAAACCTTTGTAATGATATTTTATGTATCAATAATTTAGCTTATTAATTAAGAATGAATTTGTCAAATAAAATAGTGTG ATGGAGTGTTCAAGAAAATACAGTTGGTTTGTGGTATTTCTTGCAATGTTTATTGTTGGTACAAAGTGTGGGCATGTTGAATCAAAGGGTGAGTGTGCCCCATCTACACCTGATAGAGAGGCCTTTAAAATGATGCCATGCATGAGTGCTTCAAAAGATGAAGAATATCCAGTTTCCCAAAGATGTTGTGATCAAGTCAGGAAATTAGGTCAAAGCACAAGCTGTCTTTGTGCTGTTATGTTGTCCAAAACAGCTGAATTGGTTGGATCAAAGCCTCAAATTGCTATTACAATTCCAAAGCGTTGTAACATTGTTGAACGCCCCGTTGGCTACAACTGTGGAGGTTATATACTACCTTGA MECSRKYSWFVVFLAMFIVGTKCGHVESKGECAPSTPDREAFKMMPCMSASKDEEYPVSQRCCDQVRKLGQSTSCLCAVMLSKTAELVGSKPQIAITIPKRCNIVERPVGYNCGGYILP Homology
BLAST of CaUC11G211990 vs. NCBI nr
Match: XP_038886380.1 (uncharacterized protein LOC120076581 [Benincasa hispida]) HSP 1 Score: 228.8 bits (582), Expect = 2.5e-56 Identity = 107/120 (89.17%), Postives = 114/120 (95.00%), Query Frame = 0
BLAST of CaUC11G211990 vs. NCBI nr
Match: XP_008441410.1 (PREDICTED: uncharacterized protein LOC103485536 [Cucumis melo]) HSP 1 Score: 218.0 bits (554), Expect = 4.4e-53 Identity = 101/118 (85.59%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of CaUC11G211990 vs. NCBI nr
Match: XP_004138444.1 (uncharacterized protein LOC101209106 [Cucumis sativus] >KGN45753.1 hypothetical protein Csa_005699 [Cucumis sativus]) HSP 1 Score: 217.2 bits (552), Expect = 7.4e-53 Identity = 103/123 (83.74%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of CaUC11G211990 vs. NCBI nr
Match: KAA0041465.1 (LTP_2 domain-containing protein [Cucumis melo var. makuwa] >TYK24340.1 LTP_2 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 209.1 bits (531), Expect = 2.0e-50 Identity = 97/114 (85.09%), Postives = 106/114 (92.98%), Query Frame = 0
BLAST of CaUC11G211990 vs. NCBI nr
Match: XP_022134464.1 (uncharacterized protein LOC111006702 [Momordica charantia]) HSP 1 Score: 189.1 bits (479), Expect = 2.2e-44 Identity = 83/119 (69.75%), Postives = 101/119 (84.87%), Query Frame = 0
BLAST of CaUC11G211990 vs. ExPASy TrEMBL
Match: A0A1S3B414 (uncharacterized protein LOC103485536 OS=Cucumis melo OX=3656 GN=LOC103485536 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.1e-53 Identity = 101/118 (85.59%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of CaUC11G211990 vs. ExPASy TrEMBL
Match: A0A0A0K8F0 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008840 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 3.6e-53 Identity = 103/123 (83.74%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of CaUC11G211990 vs. ExPASy TrEMBL
Match: A0A5A7TJ62 (LTP_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001170 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 9.8e-51 Identity = 97/114 (85.09%), Postives = 106/114 (92.98%), Query Frame = 0
BLAST of CaUC11G211990 vs. ExPASy TrEMBL
Match: A0A6J1BYT2 (uncharacterized protein LOC111006702 OS=Momordica charantia OX=3673 GN=LOC111006702 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44 Identity = 83/119 (69.75%), Postives = 101/119 (84.87%), Query Frame = 0
BLAST of CaUC11G211990 vs. ExPASy TrEMBL
Match: A0A6J1HD74 (uncharacterized protein LOC111463057 OS=Cucurbita moschata OX=3662 GN=LOC111463057 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.6e-43 Identity = 86/120 (71.67%), Postives = 101/120 (84.17%), Query Frame = 0
BLAST of CaUC11G211990 vs. TAIR 10
Match: AT5G05960.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 120.2 bits (300), Expect = 1.2e-27 Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 0
BLAST of CaUC11G211990 vs. TAIR 10
Match: AT3G53980.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 113.2 bits (282), Expect = 1.4e-25 Identity = 49/104 (47.12%), Postives = 67/104 (64.42%), Query Frame = 0
BLAST of CaUC11G211990 vs. TAIR 10
Match: AT3G53980.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 113.2 bits (282), Expect = 1.4e-25 Identity = 49/104 (47.12%), Postives = 67/104 (64.42%), Query Frame = 0
BLAST of CaUC11G211990 vs. TAIR 10
Match: AT2G37870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 82.8 bits (203), Expect = 2.0e-16 Identity = 45/109 (41.28%), Postives = 61/109 (55.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|