CaUC11G211640 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G211640
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	bifunctional epoxide hydrolase 2-like
Location	Ciama_Chr11: 24289500 .. 24289875 (-)
RNA-Seq Expression	CaUC11G211640
Synteny	CaUC11G211640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATACTGTGATTTCAAACCCAAGTTTTCACATCCAAATTGCAATTCCTAATAGTTGTTTCATACTGCGAAGTGTCATGGACGCGATTGAACACAACACCATCAACATTAATAACATCAAAATGCATATTACCTCTATAGGCATTGGCCCCATCGTTCTTCTTCTCTACAACTTCCCTGAGCTCTGGTACTCATGGTGCCACCAACTTTTTGTACATTTCTTTCCTCATATATCGAGCCATCACTTTAAACCTTCGCAACTATGGCAACACCAACTCCCCTGAATTGCATTCTTCTTCCACCACGCTTCATATCGTCGGCAATTTCATTGGGGCTTTGGATGAGCTTGGCAATTTTCAGAAGCTAGTTGCGTAA

mRNA sequence

ATGCATACTGCATTGGCCCCATCGTTCTTCTTCTCTACAACTTCCCTGAGCTCTGGTACTCATGGTGCCACCAACTTTTTGTACATTTCTTTCCTCATATATCGAGCCATCACTTTAAACCTTCGCAACTATGGCAACACCAACTCCCCTGAATTGCATTCTTCTTCCACCACGCTTCATATCGTCGGCAATTTCATTGGGGCTTTGGATGAGCTTGGCAATTTTCAGAAGCTAGTTGCGTAA

Coding sequence (CDS)

ATGCATACTGCATTGGCCCCATCGTTCTTCTTCTCTACAACTTCCCTGAGCTCTGGTACTCATGGTGCCACCAACTTTTTGTACATTTCTTTCCTCATATATCGAGCCATCACTTTAAACCTTCGCAACTATGGCAACACCAACTCCCCTGAATTGCATTCTTCTTCCACCACGCTTCATATCGTCGGCAATTTCATTGGGGCTTTGGATGAGCTTGGCAATTTTCAGAAGCTAGTTGCGTAA

Protein sequence

MHTALAPSFFFSTTSLSSGTHGATNFLYISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDELGNFQKLVA

Homology

[Close]

BLAST of CaUC11G211640 vs. NCBI nr
Match: XP_022984060.1 (uncharacterized protein LOC111482484 [Cucurbita maxima])

HSP 1 Score: 65.1 bits (157), Expect = 3.2e-07
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 27 LYISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDELG 74
          LY+S + YRAI  +LR YG+T SPELH+S T LHIVG+ +GALDELG
Sbjct: 45 LYLSSVGYRAIAPDLRGYGDTESPELHTSYTVLHIVGDLVGALDELG 91

[Close]

BLAST of CaUC11G211640 vs. NCBI nr
Match: XP_008454322.1 (PREDICTED: bifunctional epoxide hydrolase 2-like [Cucumis melo] >KAA0044389.1 bifunctional epoxide hydrolase 2-like [Cucumis melo var. makuwa] >TYK29517.1 bifunctional epoxide hydrolase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-06
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 27 LYISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDELG 74
          LY+S + YRAI  +LR YG+T+SPE H+S T LHIVG+ +GALDELG
Sbjct: 45 LYLSSVGYRAIAPDLRGYGDTDSPESHTSYTALHIVGDLVGALDELG 91

[Close]

BLAST of CaUC11G211640 vs. NCBI nr
Match: XP_022934346.1 (uncharacterized protein LOC111441539 [Cucurbita moschata] >KAG6581279.1 hypothetical protein SDJN03_21281, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-06
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 27 LYISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDELG 74
          LY+S + YRAI  +LR YG+T+SPE H+S T LHIVG+ +GALDELG
Sbjct: 45 LYLSSVGYRAIAPDLRGYGDTDSPESHTSYTALHIVGDLVGALDELG 91

[Close]

BLAST of CaUC11G211640 vs. NCBI nr
Match: XP_023528764.1 (uncharacterized protein LOC111791602 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-06
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 27 LYISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDELG 74
          LY+S + YRAI  +LR YG+T+SPE H+S T LHIVG+ +GALDELG
Sbjct: 45 LYLSSVGYRAIAPDLRGYGDTDSPESHTSYTALHIVGDLVGALDELG 91

[Close]

BLAST of CaUC11G211640 vs. NCBI nr
Match: XP_022984062.1 (uncharacterized protein LOC111482485 [Cucurbita maxima])

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-06
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 27 LYISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDELG 74
          LY+S + YRAI  +LR YG+T+SPE H+S T LHIVG+ +GALDELG
Sbjct: 45 LYLSSVGYRAIAPDLRGYGDTDSPESHTSYTALHIVGDLVGALDELG 91

[Close]

BLAST of CaUC11G211640 vs. ExPASy TrEMBL
Match: A0A6J1J7M9 (uncharacterized protein LOC111482484 OS=Cucurbita maxima OX=3661 GN=LOC111482484 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 27 LYISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDELG 74
          LY+S + YRAI  +LR YG+T SPELH+S T LHIVG+ +GALDELG
Sbjct: 45 LYLSSVGYRAIAPDLRGYGDTESPELHTSYTVLHIVGDLVGALDELG 91

[Close]

BLAST of CaUC11G211640 vs. ExPASy TrEMBL
Match: A0A5D3E0A4 (Bifunctional epoxide hydrolase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001200 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.8e-07
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 27 LYISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDELG 74
          LY+S + YRAI  +LR YG+T+SPE H+S T LHIVG+ +GALDELG
Sbjct: 45 LYLSSVGYRAIAPDLRGYGDTDSPESHTSYTALHIVGDLVGALDELG 91

[Close]

BLAST of CaUC11G211640 vs. ExPASy TrEMBL
Match: A0A6J1J139 (uncharacterized protein LOC111482485 OS=Cucurbita maxima OX=3661 GN=LOC111482485 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.8e-07
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 27 LYISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDELG 74
          LY+S + YRAI  +LR YG+T+SPE H+S T LHIVG+ +GALDELG
Sbjct: 45 LYLSSVGYRAIAPDLRGYGDTDSPESHTSYTALHIVGDLVGALDELG 91

[Close]

BLAST of CaUC11G211640 vs. ExPASy TrEMBL
Match: A0A6J1F1J8 (uncharacterized protein LOC111441539 OS=Cucurbita moschata OX=3662 GN=LOC111441539 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.8e-07
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 27 LYISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDELG 74
          LY+S + YRAI  +LR YG+T+SPE H+S T LHIVG+ +GALDELG
Sbjct: 45 LYLSSVGYRAIAPDLRGYGDTDSPESHTSYTALHIVGDLVGALDELG 91

[Close]

BLAST of CaUC11G211640 vs. ExPASy TrEMBL
Match: A0A1S3BZJ8 (bifunctional epoxide hydrolase 2-like OS=Cucumis melo OX=3656 GN=LOC103494757 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.8e-07
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 27 LYISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDELG 74
          LY+S + YRAI  +LR YG+T+SPE H+S T LHIVG+ +GALDELG
Sbjct: 45 LYLSSVGYRAIAPDLRGYGDTDSPESHTSYTALHIVGDLVGALDELG 91

[Close]

BLAST of CaUC11G211640 vs. TAIR 10
Match: AT4G02340.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 1.4e-05
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0


Query: 34 YRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDELG 74
          YRAI  +LR YG++++P    S T LHIVG+ +G LD LG
Sbjct: 52 YRAIAPDLRGYGDSDAPPSRESYTILHIVGDLVGLLDSLG 91

[Close]

BLAST of CaUC11G211640 vs. TAIR 10
Match: AT3G05600.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 7.1e-05
Identity = 22/51 (43.14%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 29 ISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALDEL-GNFQKL 79
          +S L YRA+  +LR YG+++SPE  S  T L++VG+ +  LD + GN +K+
Sbjct: 49 LSSLGYRAVAPDLRGYGDSDSPESFSEYTCLNVVGDLVALLDSVAGNQEKV 99

[Close]

BLAST of CaUC11G211640 vs. TAIR 10
Match: AT4G15955.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 9.2e-05
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 0


Query: 29 ISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALD 71
          +S L YR I  +LR YG+T++PE   + T+LH+VG+ IG +D
Sbjct: 57 LSSLGYRTIAPDLRGYGDTDAPESVDAYTSLHVVGDLIGLID 98

[Close]

BLAST of CaUC11G211640 vs. TAIR 10
Match: AT4G15955.2 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 9.2e-05
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 0


Query: 29 ISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALD 71
          +S L YR I  +LR YG+T++PE   + T+LH+VG+ IG +D
Sbjct: 57 LSSLGYRTIAPDLRGYGDTDAPESVDAYTSLHVVGDLIGLID 98

[Close]

BLAST of CaUC11G211640 vs. TAIR 10
Match: AT4G15955.3 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 9.2e-05
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 0


Query: 29 ISFLIYRAITLNLRNYGNTNSPELHSSSTTLHIVGNFIGALD 71
          +S L YR I  +LR YG+T++PE   + T+LH+VG+ IG +D
Sbjct: 57 LSSLGYRTIAPDLRGYGDTDAPESVDAYTSLHVVGDLIGLID 98

The following BLAST results are available for this feature:

BLAST of CaUC11G211640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984060.1	3.2e-07	65.96	uncharacterized protein LOC111482484 [Cucurbita maxima]	[more]
XP_008454322.1	1.2e-06	63.83	PREDICTED: bifunctional epoxide hydrolase 2-like [Cucumis melo] >KAA0044389.1 bi...	[more]
XP_022934346.1	1.2e-06	63.83	uncharacterized protein LOC111441539 [Cucurbita moschata] >KAG6581279.1 hypothet...	[more]
XP_023528764.1	1.2e-06	63.83	uncharacterized protein LOC111791602 [Cucurbita pepo subsp. pepo]	[more]
XP_022984062.1	1.2e-06	63.83	uncharacterized protein LOC111482485 [Cucurbita maxima]	[more]

BLAST of CaUC11G211640 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC11G211640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J7M9	1.5e-07	65.96	uncharacterized protein LOC111482484 OS=Cucurbita maxima OX=3661 GN=LOC111482484...	[more]
A0A5D3E0A4	5.8e-07	63.83	Bifunctional epoxide hydrolase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1J139	5.8e-07	63.83	uncharacterized protein LOC111482485 OS=Cucurbita maxima OX=3661 GN=LOC111482485...	[more]
A0A6J1F1J8	5.8e-07	63.83	uncharacterized protein LOC111441539 OS=Cucurbita moschata OX=3662 GN=LOC1114415...	[more]
A0A1S3BZJ8	5.8e-07	63.83	bifunctional epoxide hydrolase 2-like OS=Cucumis melo OX=3656 GN=LOC103494757 PE...	[more]

BLAST of CaUC11G211640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02340.1	1.4e-05	52.50	alpha/beta-Hydrolases superfamily protein	[more]
AT3G05600.1	7.1e-05	43.14	alpha/beta-Hydrolases superfamily protein	[more]
AT4G15955.1	9.2e-05	47.62	alpha/beta-Hydrolases superfamily protein	[more]
AT4G15955.2	9.2e-05	47.62	alpha/beta-Hydrolases superfamily protein	[more]
AT4G15955.3	9.2e-05	47.62	alpha/beta-Hydrolases superfamily protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G211640.1	CaUC11G211640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity