CaUC11G206060 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G206060
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	Ciama_Chr11: 5788390 .. 5788692 (-)
RNA-Seq Expression	CaUC11G206060
Synteny	CaUC11G206060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCCATCGTCCTCACCCAACTAGCCACCGGCCTCAGCGTCCTCGCCGGCGCCGTCCTCGTCAAGTCCGTCATGGACCACAAGCCCATGGCCGGCTCCTTCCCCCGCTGCCCCTCCTGCAACGGCACCGGCCGCGTCCCCTGCCTCTGCTCCCGCTGGTCCGACGGCGACATCGGCTGCCGTACCTGCTCCGGCTCTGGCCGTATGTTCTGCAGCAGCTGTGGCGGCTCCGGCACCGGCCGCCCCATCCCCTCCCAAATCTCCGTCCGCCGATCCAATTATCCCTCCTCTTCCTCCTGA

mRNA sequence

ATGGTTCCCATCGTCCTCACCCAACTAGCCACCGGCCTCAGCGTCCTCGCCGGCGCCGTCCTCGTCAAGTCCGTCATGGACCACAAGCCCATGGCCGGCTCCTTCCCCCGCTGCCCCTCCTGCAACGGCACCGGCCGCGTCCCCTGCCTCTGCTCCCGCTGGTCCGACGGCGACATCGGCTGCCGTACCTGCTCCGGCTCTGGCCGTATGTTCTGCAGCAGCTGTGGCGGCTCCGGCACCGGCCGCCCCATCCCCTCCCAAATCTCCGTCCGCCGATCCAATTATCCCTCCTCTTCCTCCTGA

Coding sequence (CDS)

ATGGTTCCCATCGTCCTCACCCAACTAGCCACCGGCCTCAGCGTCCTCGCCGGCGCCGTCCTCGTCAAGTCCGTCATGGACCACAAGCCCATGGCCGGCTCCTTCCCCCGCTGCCCCTCCTGCAACGGCACCGGCCGCGTCCCCTGCCTCTGCTCCCGCTGGTCCGACGGCGACATCGGCTGCCGTACCTGCTCCGGCTCTGGCCGTATGTTCTGCAGCAGCTGTGGCGGCTCCGGCACCGGCCGCCCCATCCCCTCCCAAATCTCCGTCCGCCGATCCAATTATCCCTCCTCTTCCTCCTGA

Protein sequence

MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIGCRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS

Homology

[Close]

BLAST of CaUC11G206060 vs. NCBI nr
Match: XP_038892730.1 (uncharacterized protein LOC120081711 [Benincasa hispida])

HSP 1 Score: 202.6 bits (514), Expect = 1.6e-48
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG
Sbjct: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRPIP+QISVRRSNYPSSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRSNYPSSSS 100

[Close]

BLAST of CaUC11G206060 vs. NCBI nr
Match: XP_011655560.2 (uncharacterized protein LOC105435558 [Cucumis sativus] >KAE8648678.1 hypothetical protein Csa_008156 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 6.1e-48
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVL+QLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNG+GRVPCLCSRWSDGDIG
Sbjct: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGSGRVPCLCSRWSDGDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 100

[Close]

BLAST of CaUC11G206060 vs. NCBI nr
Match: XP_008446034.1 (PREDICTED: uncharacterized protein LOC103488885 [Cucumis melo])

HSP 1 Score: 199.1 bits (505), Expect = 1.8e-47
Identity = 96/100 (96.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVL+QLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG
Sbjct: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRP+P+QIS+RRSNYPSSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 100

[Close]

BLAST of CaUC11G206060 vs. NCBI nr
Match: XP_023552719.1 (uncharacterized protein LOC111810279 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.0 bits (476), Expect = 4.1e-44
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVP+VLTQLATGLSVLAGAVLVKSVMD KPMAGSFPRCPSCNGTGRVPCLCSRWSD DIG
Sbjct: 1   MVPVVLTQLATGLSVLAGAVLVKSVMD-KPMAGSFPRCPSCNGTGRVPCLCSRWSDRDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRPIP+QISVRR+NYP SSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS 99

[Close]

BLAST of CaUC11G206060 vs. NCBI nr
Match: XP_022151926.1 (uncharacterized protein LOC111019780 [Momordica charantia])

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-43
Identity = 89/99 (89.90%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVP+VLTQLATGLSVLAGAVLVKSVMD KPMAG FPRCPSCNGTGRV CLCSRWSDGD+G
Sbjct: 1   MVPMVLTQLATGLSVLAGAVLVKSVMDQKPMAGPFPRCPSCNGTGRVACLCSRWSDGDVG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSS 100
           CRTCSGSGRMFCSSCGG+GTGRPIP+Q+SVRR+N+PSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGTGTGRPIPAQLSVRRTNHPSSS 99

[Close]

BLAST of CaUC11G206060 vs. ExPASy TrEMBL
Match: A0A1S3BEY5 (uncharacterized protein LOC103488885 OS=Cucumis melo OX=3656 GN=LOC103488885 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.5e-48
Identity = 96/100 (96.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVL+QLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG
Sbjct: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRP+P+QIS+RRSNYPSSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPLPAQISLRRSNYPSSSS 100

[Close]

BLAST of CaUC11G206060 vs. ExPASy TrEMBL
Match: A0A0A0KPV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589380 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.5e-47
Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVL+QLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNG+GRVPCLCSRWSDGDIG
Sbjct: 1   MVPIVLSQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGSGRVPCLCSRWSDGDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 101
            RTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS
Sbjct: 61  WRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 100

[Close]

BLAST of CaUC11G206060 vs. ExPASy TrEMBL
Match: A0A6J1DG38 (uncharacterized protein LOC111019780 OS=Momordica charantia OX=3673 GN=LOC111019780 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.7e-44
Identity = 89/99 (89.90%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVP+VLTQLATGLSVLAGAVLVKSVMD KPMAG FPRCPSCNGTGRV CLCSRWSDGD+G
Sbjct: 1   MVPMVLTQLATGLSVLAGAVLVKSVMDQKPMAGPFPRCPSCNGTGRVACLCSRWSDGDVG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSS 100
           CRTCSGSGRMFCSSCGG+GTGRPIP+Q+SVRR+N+PSSS
Sbjct: 61  CRTCSGSGRMFCSSCGGTGTGRPIPAQLSVRRTNHPSSS 99

[Close]

BLAST of CaUC11G206060 vs. ExPASy TrEMBL
Match: A0A6J1K8V1 (uncharacterized protein LOC111493328 OS=Cucurbita maxima OX=3661 GN=LOC111493328 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVLTQLATGLSVLAGAVLVKSVMD KPMAGS PRCPSCNGTGRVPCLCSRWSD DIG
Sbjct: 1   MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRPIP+QISVRR+NYP SSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS 99

[Close]

BLAST of CaUC11G206060 vs. ExPASy TrEMBL
Match: A0A6J1GZK6 (uncharacterized protein LOC111458584 OS=Cucurbita moschata OX=3662 GN=LOC111458584 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
           MVPIVLTQLATGLSVLAGAVLVKSVMD KPMAGS PRCPSCNGTGRVPCLCSRWSD DIG
Sbjct: 1   MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIG 60

Query: 61  CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYPSSSS 101
           CRTCSGSGRMFCSSCGGSGTGRPIP+QISVRR+NYP SSS
Sbjct: 61  CRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS 99

[Close]

BLAST of CaUC11G206060 vs. TAIR 10
Match: AT5G43260.1 (chaperone protein dnaJ-related )

HSP 1 Score: 160.6 bits (405), Expect = 6.5e-40
Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = 0


Query: 1  MVPIVLTQLATGLSVLAGAVLVKSVMDHKPMAGSFPRCPSCNGTGRVPCLCSRWSDGDIG 60
          M PIV+TQLATG+SVLAGAV +KSVMD KPMAG FPRCP+CNGTGRV C CSRWSDGD+G
Sbjct: 1  MSPIVITQLATGISVLAGAVFIKSVMDQKPMAGQFPRCPTCNGTGRVTCFCSRWSDGDVG 60

Query: 61 CRTCSGSGRMFCSSCGGSGTGRPIPSQISVRRSNYP 97
          CR CSGSGR  CS+CGGSGTGRP+P+QI+V+  N P
Sbjct: 61 CRRCSGSGRAACSNCGGSGTGRPLPAQITVQPPNRP 96

The following BLAST results are available for this feature:

BLAST of CaUC11G206060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892730.1	1.6e-48	99.00	uncharacterized protein LOC120081711 [Benincasa hispida]	[more]
XP_011655560.2	6.1e-48	98.00	uncharacterized protein LOC105435558 [Cucumis sativus] >KAE8648678.1 hypothetica...	[more]
XP_008446034.1	1.8e-47	96.00	PREDICTED: uncharacterized protein LOC103488885 [Cucumis melo]	[more]
XP_023552719.1	4.1e-44	94.00	uncharacterized protein LOC111810279 [Cucurbita pepo subsp. pepo]	[more]
XP_022151926.1	1.2e-43	89.90	uncharacterized protein LOC111019780 [Momordica charantia]	[more]

BLAST of CaUC11G206060 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC11G206060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BEY5	8.5e-48	96.00	uncharacterized protein LOC103488885 OS=Cucumis melo OX=3656 GN=LOC103488885 PE=...	[more]
A0A0A0KPV9	5.5e-47	97.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589380 PE=4 SV=1	[more]
A0A6J1DG38	5.7e-44	89.90	uncharacterized protein LOC111019780 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1K8V1	1.3e-43	94.00	uncharacterized protein LOC111493328 OS=Cucurbita maxima OX=3661 GN=LOC111493328...	[more]
A0A6J1GZK6	1.3e-43	94.00	uncharacterized protein LOC111458584 OS=Cucurbita moschata OX=3662 GN=LOC1114585...	[more]

BLAST of CaUC11G206060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43260.1	6.5e-40	77.08	chaperone protein dnaJ-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..100
None	No IPR available	PANTHER	PTHR34687	CHAPERONE PROTEIN DNAJ-LIKE PROTEIN	coord: 1..96
None	No IPR available	PANTHER	PTHR34687:SF4	BNAC09G17400D PROTEIN	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G206060.1	CaUC11G206060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane