
CaUC10G199430 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGAACCTACCTGCTTCTTCGTGACTATTAAAGCAACTGAGGTGATTCTGTTACGTGTTCGCTAAGCGAAAGCCAAGTGAGTCCCACTTCCCTTCTCTACCGCTGTTTTTCACTTCTCGAATTGCCGAATTTGCTTCGAGAACCCTTTGGCGAAGAACTGCACCCAGAAAGGGGATTTTCATAATTTCATATCTCGGATTTCTTTTAGAGGTGCGCCGTTGAGGTCGAACAAGGTGTAAGGAATTTTCGCTTGCAGATTGCGGAGGTATTTTTATTTTGTTGTTTTTGAGTTTCGTTTTATTTTATTTTTTTGTGTTCTTTATGGTTTCTTCTGAATTGCGTGGAATTTTATCTATTGAATTGAATTAGATGAGGTAGGAGTTGTAGCTGCTGATACTGGAAGTGGTGGATGGGAGTTTTTTAGTGTGGAAATTAAGTCAAAATGCGGAAATCTTTCAAGGATTCCCTTAAGGCACTCGAGGCTGATATTCAGTTCGCCAATACCTTGTAATCTCTCCATATGCGGTTCAACTTTCTTATAATTTGATATTTACTACTCTGGACTGTGTGAGAATTGCTAATGCAATGTTTGCGTTTTCATTGTCTGGAAATTATCCGCTATGATTGTTAGATTTCTATGATCGAAACTGAATCTAGTTTCAATATTTTGTATCTTATGATCCATGTTTTCTCCATCCTTAGATTATAATGTCACTCATGTTGGTTTCGTTGCGTATAGAGTTTGAACTTTAGGAAATTTTCTCTGAACGTAGTTCGATAGGTTATGCTGTCTGAGAGGGCTGCAAGTTTTTAGGTTTTGCATCTCATTATCTATACGTTCTTTCTCTCTTATTAATTAGTCGCTTCGATCTTTTTAGTAGAATCGTTCTGCGCCCGCTCAAATATGTTGTTTCCTGCTCTAAGATTTTATGGAGCTGTTTATTTAAAATTTGTTAATAACTATGGTATTTCTTATTTTCTAAATGTTGAGTAATTCGGATATGTATTTTCTTCCTTTTGTGTGGGTTATGTTGTATGCTTAGGCGGTTTGTAAACTGTCGCATTGTCTAGCTAGTAGTTTTGTATGATATCTTAACTTCTCAGGATTGTATGACAATTATAGCCTTAAACTGCAACAGATCTTTTCTTTCAAATTGGAGAGTTTTGTTGTTTTTAGTGTGCCATAGTCCCGGCTGAGGCTTATTGAATTCATAAGCATTGAAATAAAACACTTCAACTCTGAACAGGGCTTCTGATTATCCCAAGGAATACGATGGGGCATGCCTACAAATGAGATTATCCTATAGCCCGGCTGCACAGTTCTTTCTCTTCTTTGTGCAATGGACTGATTGTCATCTTGCTGGTGCATTGGGTCTGCTCAGAATTCTGATATATAAGGTGCTGCAGCCTGCATGACAAATGACATTTTTTTCTCCTACATTTCCGATTGTAGTGATTGAAGTAGGATCAAACTGATCACTAACGATAAAAATCTGATGAAATAGCTTATACTACTTGCCTCTGCACATATCTTGTCAATGCTGTGAATGTGCTAAATTTGTTTCAGGCATATGAGGACGGGAAGACTACCATGTCTATTCAAGAAAGGAAGGCTAGTCTCAAAGAGTTCTATGGTAAGTGGCTAAGAAGATAAAAGCTGCCCTTTCTTCAACTTGAGGTGTATTAAAATTTGGAGTCTTGCTAATCCTATTTGTTAGTTCTGCAAATACAGGAGTGATATTTCCTTCTCTAGTGCAACTTCAAAGGGGAATTACCGACATAGAAGAGAGAAAACAGAGAGAAGTTTATGCTGCAAAATTCGAAAGAAAGGATCGGTTGGACAAAGGAAAAACCTCTGAAATCGACTTGGAAAGAGAGGAAGAATGTGGTATTTGCATGGAACTAAACAGCAAGGTTGTCTTGCCTAGTTGCAATCATTCAATGTGCATGAAGTGCTACAGGAGTTGGTAAGCTCTCTGCTGTTTTCATGCGGTATTGGTTACTAAATGAATGCTAGTTTGTTCTTTGCAAAAAAATTGACTGGATTATTTGCAGCTGATTTTTGGAAATCGTTATCTTTTTTCAGGCGCACTCGATCTCAATCGTGCCCCTTCTGCCGTGACAGTCTCAAAAGAGTGAACTCTGGAGATCTTTGGATATGTACCAGTAGTAGTGAAATCGTCGACTTGTCCTTCATCTCTAGGGAAAATTTGAAGAGGCTTTTCATGTTCATTAATAAATTGCCTCTCATTGTTCCAGATCCAAAACTCATCTCTTATTATCTGAATCACTATTGAACATTCCTGGCTTGGTCCGGAAGTAATTTGTATATAAAGACCCCATTAACCTTCTTATTGTGCATAATTCTTATCAGTATTACATGCACATCTAGAATTTGCAAATTCTACTTTGTTCTCGACTTACATCACTCCTGTTGTTTAATTTGTTTCTGATTAGCCAAAAATTGCTGAAGCCTGCTCCAGTCAACTTCGATCATTACGATCTAGGCTGTCTTAACTGAACTTCCTTCCAGGGCTTTTGTTAACCTGAAAACAGATATTGAGAAGGGAGTGTACAGATTGATGCTGTGGTAG GGAACCTACCTGCTTCTTCGTGACTATTAAAGCAACTGAGGTGATTCTGTTACGTGTTCGCTAAGCGAAAGCCAAGTGAGTCCCACTTCCCTTCTCTACCGCTGTTTTTCACTTCTCGAATTGCCGAATTTGCTTCGAGAACCCTTTGGCGAAGAACTGCACCCAGAAAGGGGATTTTCATAATTTCATATCTCGGATTTCTTTTAGAGGTGCGCCGTTGAGGTCGAACAAGGTGTAAGGAATTTTCGCTTGCAGATTGCGGAGATGAGGTAGGAGTTGTAGCTGCTGATACTGGAAGTGGTGGATGGGAGTTTTTTAGTGTGGAAATTAAGTCAAAATGCGGAAATCTTTCAAGGATTCCCTTAAGGCACTCGAGGCTGATATTCAGTTCGCCAATACCTTGGCTTCTGATTATCCCAAGGAATACGATGGGGCATGCCTACAAATGAGATTATCCTATAGCCCGGCTGCACAGTTCTTTCTCTTCTTTGTGCAATGGACTGATTGTCATCTTGCTGGTGCATTGGGTCTGCTCAGAATTCTGATATATAAGGCATATGAGGACGGGAAGACTACCATGTCTATTCAAGAAAGGAAGGCTAGTCTCAAAGAGTTCTATGGAGTGATATTTCCTTCTCTAGTGCAACTTCAAAGGGGAATTACCGACATAGAAGAGAGAAAACAGAGAGAAGTTTATGCTGCAAAATTCGAAAGAAAGGATCGGTTGGACAAAGGAAAAACCTCTGAAATCGACTTGGAAAGAGAGGAAGAATGTGGTATTTGCATGGAACTAAACAGCAAGGTTGTCTTGCCTAGTTGCAATCATTCAATGTGCATGAAGTGCTACAGGAGTTGGCGCACTCGATCTCAATCGTGCCCCTTCTGCCGTGACAGTCTCAAAAGAGTGAACTCTGGAGATCTTTGGATATGTACCAGTAGTAGTGAAATCGTCGACTTGTCCTTCATCTCTAGGGAAAATTTGAAGAGGCTTTTCATGTTCATTAATAAATTGCCTCTCATTGCTGTCTTAACTGAACTTCCTTCCAGGGCTTTTGTTAACCTGAAAACAGATATTGAGAAGGGAGTGTACAGATTGATGCTGTGGTAG ATGCGGAAATCTTTCAAGGATTCCCTTAAGGCACTCGAGGCTGATATTCAGTTCGCCAATACCTTGGCTTCTGATTATCCCAAGGAATACGATGGGGCATGCCTACAAATGAGATTATCCTATAGCCCGGCTGCACAGTTCTTTCTCTTCTTTGTGCAATGGACTGATTGTCATCTTGCTGGTGCATTGGGTCTGCTCAGAATTCTGATATATAAGGCATATGAGGACGGGAAGACTACCATGTCTATTCAAGAAAGGAAGGCTAGTCTCAAAGAGTTCTATGGAGTGATATTTCCTTCTCTAGTGCAACTTCAAAGGGGAATTACCGACATAGAAGAGAGAAAACAGAGAGAAGTTTATGCTGCAAAATTCGAAAGAAAGGATCGGTTGGACAAAGGAAAAACCTCTGAAATCGACTTGGAAAGAGAGGAAGAATGTGGTATTTGCATGGAACTAAACAGCAAGGTTGTCTTGCCTAGTTGCAATCATTCAATGTGCATGAAGTGCTACAGGAGTTGGCGCACTCGATCTCAATCGTGCCCCTTCTGCCGTGACAGTCTCAAAAGAGTGAACTCTGGAGATCTTTGGATATGTACCAGTAGTAGTGAAATCGTCGACTTGTCCTTCATCTCTAGGGAAAATTTGAAGAGGCTTTTCATGTTCATTAATAAATTGCCTCTCATTGCTGTCTTAACTGAACTTCCTTCCAGGGCTTTTGTTAACCTGAAAACAGATATTGAGAAGGGAGTGTACAGATTGATGCTGTGGTAG MRKSFKDSLKALEADIQFANTLASDYPKEYDGACLQMRLSYSPAAQFFLFFVQWTDCHLAGALGLLRILIYKAYEDGKTTMSIQERKASLKEFYGVIFPSLVQLQRGITDIEERKQREVYAAKFERKDRLDKGKTSEIDLEREEECGICMELNSKVVLPSCNHSMCMKCYRSWRTRSQSCPFCRDSLKRVNSGDLWICTSSSEIVDLSFISRENLKRLFMFINKLPLIAVLTELPSRAFVNLKTDIEKGVYRLMLW Homology
BLAST of CaUC10G199430 vs. NCBI nr
Match: XP_038904042.1 (E3 ubiquitin-protein ligase AIRP2 isoform X1 [Benincasa hispida]) HSP 1 Score: 447.2 bits (1149), Expect = 9.5e-122 Identity = 222/228 (97.37%), Postives = 224/228 (98.25%), Query Frame = 0
BLAST of CaUC10G199430 vs. NCBI nr
Match: XP_011651863.1 (E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >XP_031738614.1 E3 ubiquitin-protein ligase AIRP2 [Cucumis sativus] >KGN58763.1 hypothetical protein Csa_000946 [Cucumis sativus]) HSP 1 Score: 446.4 bits (1147), Expect = 1.6e-121 Identity = 220/228 (96.49%), Postives = 226/228 (99.12%), Query Frame = 0
BLAST of CaUC10G199430 vs. NCBI nr
Match: XP_008442427.1 (PREDICTED: uncharacterized protein LOC103486301 [Cucumis melo] >KAA0044165.1 E3 ubiquitin-protein ligase RNF8-B [Cucumis melo var. makuwa] >TYK24968.1 E3 ubiquitin-protein ligase RNF8-B [Cucumis melo var. makuwa]) HSP 1 Score: 443.7 bits (1140), Expect = 1.1e-120 Identity = 219/228 (96.05%), Postives = 224/228 (98.25%), Query Frame = 0
BLAST of CaUC10G199430 vs. NCBI nr
Match: XP_022145744.1 (uncharacterized protein LOC111015127 isoform X1 [Momordica charantia] >XP_022145745.1 uncharacterized protein LOC111015127 isoform X1 [Momordica charantia] >XP_022145746.1 uncharacterized protein LOC111015127 isoform X1 [Momordica charantia]) HSP 1 Score: 430.3 bits (1105), Expect = 1.2e-116 Identity = 212/228 (92.98%), Postives = 221/228 (96.93%), Query Frame = 0
BLAST of CaUC10G199430 vs. NCBI nr
Match: XP_023527445.1 (LON peptidase N-terminal domain and RING finger protein 1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 423.3 bits (1087), Expect = 1.5e-114 Identity = 209/228 (91.67%), Postives = 217/228 (95.18%), Query Frame = 0
BLAST of CaUC10G199430 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 5.3e-99 Identity = 172/228 (75.44%), Postives = 199/228 (87.28%), Query Frame = 0
BLAST of CaUC10G199430 vs. ExPASy Swiss-Prot
Match: Q803C1 (E3 ubiquitin-protein ligase rnf8 OS=Danio rerio OX=7955 GN=rnf8 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05 Identity = 33/105 (31.43%), Postives = 49/105 (46.67%), Query Frame = 0
BLAST of CaUC10G199430 vs. ExPASy Swiss-Prot
Match: Q9QXP6 (E3 ubiquitin-protein ligase makorin-1 OS=Mus musculus OX=10090 GN=Mkrn1 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04 Identity = 25/68 (36.76%), Postives = 33/68 (48.53%), Query Frame = 0
BLAST of CaUC10G199430 vs. ExPASy Swiss-Prot
Match: Q13064 (Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens OX=9606 GN=MKRN3 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04 Identity = 25/71 (35.21%), Postives = 38/71 (53.52%), Query Frame = 0
BLAST of CaUC10G199430 vs. ExPASy Swiss-Prot
Match: Q9UHC7 (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3) HSP 1 Score: 47.8 bits (112), Expect = 2.2e-04 Identity = 25/76 (32.89%), Postives = 36/76 (47.37%), Query Frame = 0
BLAST of CaUC10G199430 vs. ExPASy TrEMBL
Match: A0A0A0LA78 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731740 PE=4 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 7.9e-122 Identity = 220/228 (96.49%), Postives = 226/228 (99.12%), Query Frame = 0
BLAST of CaUC10G199430 vs. ExPASy TrEMBL
Match: A0A5D3DMZ7 (E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00850 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 5.1e-121 Identity = 219/228 (96.05%), Postives = 224/228 (98.25%), Query Frame = 0
BLAST of CaUC10G199430 vs. ExPASy TrEMBL
Match: A0A1S3B5N9 (uncharacterized protein LOC103486301 OS=Cucumis melo OX=3656 GN=LOC103486301 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 5.1e-121 Identity = 219/228 (96.05%), Postives = 224/228 (98.25%), Query Frame = 0
BLAST of CaUC10G199430 vs. ExPASy TrEMBL
Match: A0A6J1CVC0 (uncharacterized protein LOC111015127 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015127 PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 5.8e-117 Identity = 212/228 (92.98%), Postives = 221/228 (96.93%), Query Frame = 0
BLAST of CaUC10G199430 vs. ExPASy TrEMBL
Match: A0A6J1F2V6 (LON peptidase N-terminal domain and RING finger protein 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441644 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 1.6e-114 Identity = 208/228 (91.23%), Postives = 217/228 (95.18%), Query Frame = 0
BLAST of CaUC10G199430 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein ) HSP 1 Score: 362.1 bits (928), Expect = 3.8e-100 Identity = 172/228 (75.44%), Postives = 199/228 (87.28%), Query Frame = 0
BLAST of CaUC10G199430 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein ) HSP 1 Score: 335.1 bits (858), Expect = 4.9e-92 Identity = 160/242 (66.12%), Postives = 194/242 (80.17%), Query Frame = 0
BLAST of CaUC10G199430 vs. TAIR 10
Match: AT3G47160.2 (RING/U-box superfamily protein ) HSP 1 Score: 326.6 bits (836), Expect = 1.7e-89 Identity = 160/254 (62.99%), Postives = 194/254 (76.38%), Query Frame = 0
BLAST of CaUC10G199430 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein ) HSP 1 Score: 325.9 bits (834), Expect = 3.0e-89 Identity = 158/225 (70.22%), Postives = 188/225 (83.56%), Query Frame = 0
BLAST of CaUC10G199430 vs. TAIR 10
Match: AT5G58787.2 (RING/U-box superfamily protein ) HSP 1 Score: 294.7 bits (753), Expect = 7.4e-80 Identity = 147/225 (65.33%), Postives = 176/225 (78.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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