CaUC10G192530 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G192530
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Ribosomal protein
Location	Ciama_Chr10: 27095654 .. 27102778 (-)
RNA-Seq Expression	CaUC10G192530
Synteny	CaUC10G192530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTAGAAGAAGAACCTCCCAACCTCACTCTCCATCAATGGCAGCCTGTACTTCCACTTCTCCTTCTTCCCTAATGCTCACTTCTGCTTCTTCTTCTGTACATCCCCAAGACCTCGCTTCCTCCATCGTCTCTTTCAAGGGGAAACCCCAGTTTTCCACTATCAAATCCTTCTCCTCTTCTCATTTTCTCTGCAGGCCTACGAGATCACCCGATTGCGTATTTCTTCATTTTCAGAGACGAGCGAGGCACCATGTCATCGTTGCAGCTCTCGCCGCTGAAGCGAATGTCGCGGAGGTGGAAGCCGAGGAAGATGAGGGGGTCGCCGCGGCGGGGACAGCTACCGTCACTGCACCTAAACCCAAGAAGGGAAAAGCCGCCTTGCCCCTTAAAAGAGATAGAGTATTTTCCAAAATCTTGTAGTGTTTGGTTTTGTTTTTTGATTTGGGTCTGTGATTGGATTGTGGGTTCTGTTCTGTCTCATGGTTGTGCTTGGAGGAGCTTGTTTTCAAGCTTAGAAATGGAGGGTGTTTTCTTGTTTTGGGATGTTTAGTGATCATTGCGGTGGACTATGGGGTTCATTTTCTTTGGCTTTCCATGTCCTTATTTCATTATTGATGTCTGAATTCAATTTGTTGCGTGATATGTCAGAGGAGATCCAAGAGATTCTTGGAAATTCAAAAACTGAGGGAAAACAAAAAAGAGTATGACCTTAAGACAGCAATATCTCTGCTCAAGGAAATGGGTAGCACAAAGTTTGTAGAAACAGCTGAAGCTCACTTCCGGCTCAACATTGATCCCAAATACAATGATCAACAGCTGAGAGCAACCGTGAGTTTTGTTTTATGATCCTTTTACTGTTAAGGGAAGTTATAAGGAATATGGTGAGGTCATTTTGTTTGAGTGCTTTTATGCAGGTAAATCTGCCTAAAGGAACTGGCCAAACTGTAAAAGTAGCTGTTCTTACCCAAGGTAGTTGCTTTTATACTTAAGCGACTCTTTTTCCCAAACTATGCTATTCTGCTTCAATATTTTAACTAAATTCACCAAGTAGAGTCTTTGTCTGTGGCTAAGGCCTTGTTTGAGAGTTGGGTTTGAAACAGTTTTATGTCCACCCACCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTAAAAAATAGTTAGCTTAGTTAGACAAGCACAAGCTAACTCAATTACAATCAAGAAACTTTCTGGAGTTATCTTCTTGTTGAACTCTAAGCTAAGTTTGGGTAGTAGAGAAAGAGATCGTACTATAATTTGAAGTTTTCACCCTCGAGTTGAGGTCCATGGATCTAGAACAGGGTAGAGTTCAGTCTTGCGGCTGTTTGATCTTGATCGAACTGAATAGTAGCCTTTTATCCATCTAGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTATAAATATTTTAGGGAGTGTTTGGTCCAAGGAGTAGGAATTGGTTAACTCCGTTCTTTGTTTGGCCAAAGGAGTTGGGCTCCACGACTAAAAAACATCAACTTCATGTCGTGTTTGGCCCAAGGAGTAGGAGTTGGTTAACTCCTTTCTCTGTTTGGCCAAAGGAGCTTGTGGTCTCCACGACTAAAAAGCATCAAATTTTATTTCATATCTTATTAACTCCTTACATTGTGGCCCCACACCTAAACAACTCCTCGGACTACACACGTCAACTCCTTGCCCCAACACCCTTTAGTAGTTGCTTGTTAAAAGAACTTTACTGTGTAGGGTACAATACTAAGAAGTTGAAAGAAATATACAGGTGAGAAATTCGATGAAGCAAAAAATGCTGGAGCGGATTTGGTTGGTGGGGAGGACTTAATAGAACAGATAAAAGGAGGATTTATGGATTTTGACAAATTGATTGCTTCCCCAGACATGATGCCTAAGGTATTGTTCTGACTGCATTACTTCAATCATTCTTTCATTTATCTTTTGAGATTTTTATAACTTTCGCAACATATAAATTGTTTTCCTAAACAAGTTGCATAACTTTAAAGGATGAATTAGATGGTTAGGATTACACTGATGATACTTATGTAATGCAGAAAGAAATAAGAAAACAAGAGACATGAATATCAATTTAATAGTTACCCTGGATTTATTGAACCATTTTTGGTCATAGATATACTTCCTAGATTTTGTTGATCAAAGTCGTTGCCTAGTGGCCGCAGCCAAATTTGAGCCAGTTCTTAAAATTGACAAAGTCTCTTATACAAAGTGCTTTCTCGCATTGTCTATTTATCCTTTATGTCAATTATCTGTATTACTAAGAGCAAGACAATATAGTTGATTTCCATATTTGAGTCTTCTCCGCTCATTTCAGGTTGCTAGCCTTGGGAAGCTCCTAGGACCACGGGGGCTCATGCCGAATCCGAAAGCCGGTACTGTAGCAACCAATTTGCCTCAGGTAACAATGATCTTTTTCCAGTATCTCCATTGCATCCAGGTTTCGTATCTATCCATTAGAAATTTAAGACTTTAGTTAAACTGGGCGTCCCTGATTTCAGGCAATAGCAGAATTCAAGCAGGGGAAAGTTGAATACAGAGCAGATAAAACTGGTATAGTTCACTTACCATTTGGAAAAGCTGACTTCAGCGAAGAGGACCTTCTCATAAACTTGCTTGCTGCCATAGTATGTTCTTCGCTTCTTTCTGTAGCTGTTAGTCTCTAGAGACAGGTCTCGATCATTTTTGATAAGTCATGTTCTTCCAACTCTGACAGAAATCAATAGAAACCAATAAGCCATCAGGTGCAAAAGGTGTATACTGGAAAAGCGCTCACATATGCTCGTCGATGGGGCCTTCAATTCGGTTAAATATAAGGGAGATGCTGGACTTCAAACTTCCCTCGGACGCTTGACTAATAACAGACCTGTAAATTCCTTCTGTTTGTTGAATCAGCCTCTGGGGGATCCACTGGAATATAATGATGCCCAATGTGAGCAGCACTGGAAACAAGATGCTAGAAGAAACTAGGAAGAAAAGTGAGGAGACATCAGATAATTCCGATTACACAGCAACAAGCATACTGCATAGTCTTCCATACTGACTCAGTTTGTATTAATGGTGTTAAGTTCTTATTGATCTACTACACTTTGATTGACCTCTTGGTTTTTAAGGGGAAAAAATGATAAATGTACTGAATTGTATTGACCAATTGCTGCTCTTTTATGTGGCATATTTCAAAAGTGGTTCTTGTTGGTTCGTCGTAAAGGGGTGTTCGGTCAAATACGGTTCCATTAATCTAGGTTACACAATGTTCATTTATTTTCCTGGGATGTTTTGACATGCAAATATGAGACTCTGGAACTCTCTTGCAATTGTAATATTGACTTATATTAACAATTTTACTCTGAAACAGCAACTTACACACTAAAATGCCCAAGGGGATTTAAGAAGATGACTTTAGATGAACATA

mRNA sequence

ATGAGAAGAAGAACCTCCCAACCTCACTCTCCATCAATGGCAGCCTGTACTTCCACTTCTCCTTCTTCCCTAATGCTCACTTCTGCTTCTTCTTCTGTACATCCCCAAGACCTCGCTTCCTCCATCGTCTCTTTCAAGGGGAAACCCCAGTTTTCCACTATCAAATCCTTCTCCTCTTCTCATTTTCTCTGCAGGCCTACGAGATCACCCGATTGCGTATTTCTTCATTTTCAGAGACGAGCGAGGCACCATGTCATCGTTGCAGCTCTCGCCGCTGAAGCGAATGTCGCGGAGGTGGAAGCCGAGGAAGATGAGGGGGTCGCCGCGGCGGGGACAGCTACCGTCACTGCACCTAAACCCAAGAAGGGAAAAGCCGCCTTGCCCCTTAAAAGAGATAGAAGGAGATCCAAGAGATTCTTGGAAATTCAAAAACTGAGGGAAAACAAAAAAGAGTATGACCTTAAGACAGCAATATCTCTGCTCAAGGAAATGGGTAGCACAAAGTTTGTAGAAACAGCTGAAGCTCACTTCCGGCTCAACATTGATCCCAAATACAATGATCAACAGCTGAGAGCAACCGTAAATCTGCCTAAAGGAACTGGCCAAACTGTAAAAGTAGCTGTTCTTACCCAAGGTGAGAAATTCGATGAAGCAAAAAATGCTGGAGCGGATTTGGTTGGTGGGGAGGACTTAATAGAACAGATAAAAGGAGGATTTATGGATTTTGACAAATTGATTGCTTCCCCAGACATGATGCCTAAGATATACTTCCTAGATTTTGTTGATCAAAGTCGTTGCCTAGTGGCCGCAGCCAAATTTGAGCCAGTTCTTAAAATTGACAAAGTCTCTTATACAAAGTGCTTTCTCGCATTGTCTATTTATCCTTTATGTCAATTATCTGTTGCTAGCCTTGGGAAGCTCCTAGGACCACGGGGGCTCATGCCGAATCCGAAAGCCGGTACTGTAGCAACCAATTTGCCTCAGGCAATAGCAGAATTCAAGCAGGGGAAAGTTGAATACAGAGCAGATAAAACTGGTATAGTTCACTTACCATTTGGAAAAGCTGACTTCAGCGAAGAGGACCTTCTCATAAACTTGCTTGCTGCCATAAAATCAATAGAAACCAATAAGCCATCAGGTGCAAAAGGTGTATACTGGAAAAGCGCTCACATATGCTCGTCGATGGGGCCTTCAATTCGGTTAAATATAAGGGAGATGCTGGACTTCAAACTTCCCTCGGACGCTTGACTAATAACAGACCTGTAAATTCCTTCTGTTTGTTGAATCAGCCTCTGGGGGATCCACTGGAATATAATGATGCCCAATGTGAGCAGCACTGGAAACAAGATGCTAGAAGAAACTAGGAAGAAAAGTGAGGAGACATCAGATAATTCCGATTACACAGCAACAAGCATACTGCATAGTCTTCCATACTGACTCAGTTTGTATTAATGGTGTTAAGTTCTTATTGATCTACTACACTTTGATTGACCTCTTGGTTTTTAAGGGGAAAAAATGATAAATGTACTGAATTGTATTGACCAATTGCTGCTCTTTTATGTGGCATATTTCAAAAGTGGTTCTTGTTGGTTCGTCGTAAAGGGGTGTTCGGTCAAATACGGTTCCATTAATCTAGGTTACACAATGTTCATTTATTTTCCTGGGATGTTTTGACATGCAAATATGAGACTCTGGAACTCTCTTGCAATTGTAATATTGACTTATATTAACAATTTTACTCTGAAACAGCAACTTACACACTAAAATGCCCAAGGGGATTTAAGAAGATGACTTTAGATGAACATA

Coding sequence (CDS)

ATGAGAAGAAGAACCTCCCAACCTCACTCTCCATCAATGGCAGCCTGTACTTCCACTTCTCCTTCTTCCCTAATGCTCACTTCTGCTTCTTCTTCTGTACATCCCCAAGACCTCGCTTCCTCCATCGTCTCTTTCAAGGGGAAACCCCAGTTTTCCACTATCAAATCCTTCTCCTCTTCTCATTTTCTCTGCAGGCCTACGAGATCACCCGATTGCGTATTTCTTCATTTTCAGAGACGAGCGAGGCACCATGTCATCGTTGCAGCTCTCGCCGCTGAAGCGAATGTCGCGGAGGTGGAAGCCGAGGAAGATGAGGGGGTCGCCGCGGCGGGGACAGCTACCGTCACTGCACCTAAACCCAAGAAGGGAAAAGCCGCCTTGCCCCTTAAAAGAGATAGAAGGAGATCCAAGAGATTCTTGGAAATTCAAAAACTGAGGGAAAACAAAAAAGAGTATGACCTTAAGACAGCAATATCTCTGCTCAAGGAAATGGGTAGCACAAAGTTTGTAGAAACAGCTGAAGCTCACTTCCGGCTCAACATTGATCCCAAATACAATGATCAACAGCTGAGAGCAACCGTAAATCTGCCTAAAGGAACTGGCCAAACTGTAAAAGTAGCTGTTCTTACCCAAGGTGAGAAATTCGATGAAGCAAAAAATGCTGGAGCGGATTTGGTTGGTGGGGAGGACTTAATAGAACAGATAAAAGGAGGATTTATGGATTTTGACAAATTGATTGCTTCCCCAGACATGATGCCTAAGATATACTTCCTAGATTTTGTTGATCAAAGTCGTTGCCTAGTGGCCGCAGCCAAATTTGAGCCAGTTCTTAAAATTGACAAAGTCTCTTATACAAAGTGCTTTCTCGCATTGTCTATTTATCCTTTATGTCAATTATCTGTTGCTAGCCTTGGGAAGCTCCTAGGACCACGGGGGCTCATGCCGAATCCGAAAGCCGGTACTGTAGCAACCAATTTGCCTCAGGCAATAGCAGAATTCAAGCAGGGGAAAGTTGAATACAGAGCAGATAAAACTGGTATAGTTCACTTACCATTTGGAAAAGCTGACTTCAGCGAAGAGGACCTTCTCATAAACTTGCTTGCTGCCATAAAATCAATAGAAACCAATAAGCCATCAGGTGCAAAAGGTGTATACTGGAAAAGCGCTCACATATGCTCGTCGATGGGGCCTTCAATTCGGTTAAATATAAGGGAGATGCTGGACTTCAAACTTCCCTCGGACGCTTGA

Protein sequence

MRRRTSQPHSPSMAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSPDCVFLHFQRRARHHVIVAALAAEANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALPLKRDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMMPKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIKSIETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA

Homology

[Close]

BLAST of CaUC10G192530 vs. NCBI nr
Match: XP_022948661.1 (50S ribosomal protein L1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 609.4 bits (1570), Expect = 2.3e-170
Identity = 329/403 (81.64%), Postives = 340/403 (84.37%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSPDC 72
           MAACTSTSPSSLMLT ASSSV+PQDL SSIVSF GK +FSTIKSFSS HFLCRP RS D 
Sbjct: 1   MAACTSTSPSSLMLTYASSSVYPQDLTSSIVSFNGKSRFSTIKSFSSCHFLCRPRRSADW 60

Query: 73  VFLHFQRRARHHVIVAALAAEANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALPLKRD 132
           + L+FQRRARHHVIVAALAAEANVAE EAE +EGVA  GT TV APKPKKGKAALPLKRD
Sbjct: 61  ICLNFQRRARHHVIVAALAAEANVAEAEAEAEEGVAVGGTDTVAAPKPKKGKAALPLKRD 120

Query: 133 RRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLRA 192
           RRRSKRFLEIQKLRENKKEY++KTAISLLKEM STKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RRRSKRFLEIQKLRENKKEYEIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 193 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 252
           TVNLPKGTGQTV+VAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240

Query: 253 PKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPRG 312
           PK                                              VASLGKLLGPRG
Sbjct: 241 PK----------------------------------------------VASLGKLLGPRG 300

Query: 313 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIKS 372
           LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLL+NLLAAIKS
Sbjct: 301 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLVNLLAAIKS 357

Query: 373 IETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
           +ETNKP+GAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPS A
Sbjct: 361 VETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSTA 357

[Close]

BLAST of CaUC10G192530 vs. NCBI nr
Match: XP_022998464.1 (50S ribosomal protein L1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 607.8 bits (1566), Expect = 6.8e-170
Identity = 329/403 (81.64%), Postives = 340/403 (84.37%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSPDC 72
           MAACTSTSPSSLMLT ASSSV+PQDLASSIVSF GK +FSTIKSFSS HFLCRP RS D 
Sbjct: 1   MAACTSTSPSSLMLTYASSSVYPQDLASSIVSFNGKSRFSTIKSFSSCHFLCRPRRSADW 60

Query: 73  VFLHFQRRARHHVIVAALAAEANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALPLKRD 132
           + L+FQRRARHHVIVAALAAEANVAE EAE +EGVA  GT TV APKPKKGKAALPLKRD
Sbjct: 61  ICLNFQRRARHHVIVAALAAEANVAEAEAEAEEGVAVGGTDTVAAPKPKKGKAALPLKRD 120

Query: 133 RRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLRA 192
           RRRSKRFLEIQKLRENKKEY++KTAISLLKEM STKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RRRSKRFLEIQKLRENKKEYEIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 193 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 252
           TVNLPKGTGQTV+VAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240

Query: 253 PKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPRG 312
           PK                                              VASLGKLLGPRG
Sbjct: 241 PK----------------------------------------------VASLGKLLGPRG 300

Query: 313 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIKS 372
           LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLL+NLLAAIKS
Sbjct: 301 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLVNLLAAIKS 357

Query: 373 IETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
           +ETNKP+GAKGVYWKSAHICSSMGPSIRLNIREMLDFKL S A
Sbjct: 361 VETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLSSTA 357

[Close]

BLAST of CaUC10G192530 vs. NCBI nr
Match: XP_038905945.1 (50S ribosomal protein L1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 607.4 bits (1565), Expect = 8.9e-170
Identity = 337/404 (83.42%), Postives = 340/404 (84.16%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSF-SSSHFLCRPTRSPD 72
           MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFK KPQ STIKSF SSSHFL  P RS D
Sbjct: 1   MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKPKPQISTIKSFSSSSHFLGWPRRSTD 60

Query: 73  CVFLHFQRRARHHVIVAALAAEANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALPLKR 132
            VFLHFQRRARHHVIVAALAAEANVAEVEAEE+       T TV APKPKKGKAALPLKR
Sbjct: 61  WVFLHFQRRARHHVIVAALAAEANVAEVEAEEE-------TPTVAAPKPKKGKAALPLKR 120

Query: 133 DRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLR 192
           DRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLR
Sbjct: 121 DRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLR 180

Query: 193 ATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM 252
           ATVNLPKGTGQTV+VAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM
Sbjct: 181 ATVNLPKGTGQTVRVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM 240

Query: 253 MPKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPR 312
           MPK                                              VASLGKLLGPR
Sbjct: 241 MPK----------------------------------------------VASLGKLLGPR 300

Query: 313 GLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIK 372
           GLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIK
Sbjct: 301 GLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIK 351

Query: 373 SIETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
           SIETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPS A
Sbjct: 361 SIETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSSA 351

[Close]

BLAST of CaUC10G192530 vs. NCBI nr
Match: KAG7036595.1 (50S ribosomal protein L1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 607.1 bits (1564), Expect = 1.2e-169
Identity = 328/403 (81.39%), Postives = 340/403 (84.37%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSPDC 72
           MAACTSTSPSSLMLT ASSSV+PQDLASSIVSF GK +FSTIKSFSS H LCRP RS D 
Sbjct: 1   MAACTSTSPSSLMLTYASSSVYPQDLASSIVSFNGKSRFSTIKSFSSCHLLCRPRRSADW 60

Query: 73  VFLHFQRRARHHVIVAALAAEANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALPLKRD 132
           + L+FQRRARHHVIVAALAAEANVAE EAE +EGVA  GT TV APKPKKGKAALPLKRD
Sbjct: 61  ICLNFQRRARHHVIVAALAAEANVAEAEAEAEEGVAVGGTDTVAAPKPKKGKAALPLKRD 120

Query: 133 RRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLRA 192
           RRRSKRFLEIQKLRENKKEY++KTAISLLKEM STKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RRRSKRFLEIQKLRENKKEYEIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 193 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 252
           TVNLPKGTGQTV+VAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFM+FDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM 240

Query: 253 PKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPRG 312
           PK                                              VASLGKLLGPRG
Sbjct: 241 PK----------------------------------------------VASLGKLLGPRG 300

Query: 313 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIKS 372
           LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLL+NLLAAIKS
Sbjct: 301 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLVNLLAAIKS 357

Query: 373 IETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
           +ETNKP+GAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPS A
Sbjct: 361 VETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSTA 357

[Close]

BLAST of CaUC10G192530 vs. NCBI nr
Match: XP_022152718.1 (LOW QUALITY PROTEIN: 50S ribosomal protein L1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 606.7 bits (1563), Expect = 1.5e-169
Identity = 332/407 (81.57%), Postives = 340/407 (83.54%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSPDC 72
           MA CTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIK+FSS+HFLCRP RS D 
Sbjct: 1   MATCTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKAFSSAHFLCRPRRSTDW 60

Query: 73  VFLHFQRRARHHVIVAALAAE----ANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALP 132
           +FLHFQRRARHHVIVAALAAE        E EA+E+EG+  A  ATV APKPKKGKAALP
Sbjct: 61  IFLHFQRRARHHVIVAALAAEXXXXXXXXEAEAKEEEGLDGA-AATVAAPKPKKGKAALP 120

Query: 133 LKRDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQ 192
           LKRDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEM STKFVETAEAHFRLNIDPKYNDQ
Sbjct: 121 LKRDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQ 180

Query: 193 QLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIAS 252
           QLRATVNLPKGTGQTV+VAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIAS
Sbjct: 181 QLRATVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIAS 240

Query: 253 PDMMPKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLL 312
           PDMMPK                                              VASLGKLL
Sbjct: 241 PDMMPK----------------------------------------------VASLGKLL 300

Query: 313 GPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLA 372
           GPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLA
Sbjct: 301 GPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLA 360

Query: 373 AIKSIETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
           AIKS+ETNKPSGAKGVYWKS HICSSMGPSIRLNIREMLDFKLPS A
Sbjct: 361 AIKSVETNKPSGAKGVYWKSTHICSSMGPSIRLNIREMLDFKLPSSA 360

[Close]

BLAST of CaUC10G192530 vs. ExPASy Swiss-Prot
Match: Q9LY66 (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 2.2e-115
Identity = 244/403 (60.55%), Postives = 280/403 (69.48%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSVHPQDL--ASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSP 72
           MAAC   + SSLML  A++S   QDL    S+ SF      S     S    L   +R  
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLFSFAS----SRPNHLSFPLLLLGGSRDR 60

Query: 73  DCVFLHFQRRARHHVIVAALAAEANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALPLK 132
            C  +   R + H  IV+A+AAE   A+++ EED  +    TA +  PKPKKGKAAL LK
Sbjct: 61  RCAAI--DRASNHKFIVSAVAAE---ADLDTEED--LEQTATAVLDPPKPKKGKAALVLK 120

Query: 133 RDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQL 192
           RDR RSKRFLEIQKLRE KKEYD+ TAISLLK+  +T+FVE+ EAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQL 180

Query: 193 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPD 252
           RATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFM+FDKLIASPD
Sbjct: 181 RATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPD 240

Query: 253 MMPKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGP 312
           MM K                                              VA LGK+LGP
Sbjct: 241 MMVK----------------------------------------------VAGLGKILGP 300

Query: 313 RGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAI 372
           RGLMPNPKAGTV  N+PQAI EFK+GKVE+RADKTGIVH+PFGK +F+EEDLLIN LAA+
Sbjct: 301 RGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVNFTEEDLLINFLAAV 344

Query: 373 KSIETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPS 414
           KS+ETNKP GAKGVYWKSAHICSSMGPSI+LNIREM+DFK P+
Sbjct: 361 KSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPPT 344

[Close]

BLAST of CaUC10G192530 vs. ExPASy Swiss-Prot
Match: Q9LE95 (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.6e-113
Identity = 244/409 (59.66%), Postives = 283/409 (69.19%), Query Frame = 0


Query: 18  STSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFST-IKSFSSSHFLCRPT---RSPDC- 77
           + +P SL L  ASSS            ++  P F T  K    +  LCR T   R   C 
Sbjct: 3   TAAPPSLSLCYASSS----------FQYQQDPSFQTHFKPLLLNSSLCRLTLNQRERSCL 62

Query: 78  --VFLHFQRRARHHV---IVAALAAEANVAEVEAEEDEGVAAAGTATVTAP-KPKKGKAA 137
             V    Q+++   V   ++AA+AAEA VA++E EE E   + G AT+ +P KPKKGKAA
Sbjct: 63  KWVDFTSQKQSPKSVSFRVLAAVAAEAEVADMEEEEGE---SGGVATLPSPTKPKKGKAA 122

Query: 138 LPLKRDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYN 197
           LPLK DR RSKRFLEIQKLRE K+EYDLKTA+SL+K+M STKFVETAEAHFRLNIDPKYN
Sbjct: 123 LPLKSDRTRSKRFLEIQKLREIKQEYDLKTALSLMKQMSSTKFVETAEAHFRLNIDPKYN 182

Query: 198 DQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLI 257
           DQQLRATV+LPKGTG+TVK+AVL QG+K DEAK AGAD+VGGE+LIEQIKGGFMDFDKLI
Sbjct: 183 DQQLRATVSLPKGTGKTVKIAVLAQGDKIDEAKAAGADIVGGEELIEQIKGGFMDFDKLI 242

Query: 258 ASPDMMPKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGK 317
           A+ DMM K                                              VASLG+
Sbjct: 243 ATSDMMAK----------------------------------------------VASLGR 302

Query: 318 LLGPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINL 377
           +LGPRGLMP PKAGTV  N+ QA+ EFK+GKVE+R DKTGIVH+PFGK +F EEDLLINL
Sbjct: 303 ILGPRGLMPTPKAGTVTPNVAQAVEEFKKGKVEFRVDKTGIVHIPFGKLNFEEEDLLINL 352

Query: 378 LAAIKSIETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
            A IKS+ETNKP+GAKGVYWKSAHI SSMGPSIRLNIREMLD+K PS+A
Sbjct: 363 FATIKSVETNKPTGAKGVYWKSAHISSSMGPSIRLNIREMLDYKPPSNA 352

[Close]

BLAST of CaUC10G192530 vs. ExPASy Swiss-Prot
Match: B0JNQ5 (50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rplA PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 7.5e-71
Identity = 145/279 (51.97%), Postives = 185/279 (66.31%), Query Frame = 0


Query: 133 RRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLRA 192
           ++ S+R  + Q   EN K Y+   A++LLKE+ + KF ETAEAH RL IDPKY DQQLR 
Sbjct: 3   KKVSRRLRDAQAKVEN-KAYEPLEALTLLKELATAKFDETAEAHIRLGIDPKYTDQQLRT 62

Query: 193 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 252
           TV+LPKGTG+TV+VAV+T+GEK  EA NAGAD+VG E+LIE+I  G MDF+ LIA+PDMM
Sbjct: 63  TVSLPKGTGRTVRVAVITRGEKVQEANNAGADIVGSEELIEEIAKGMMDFEVLIATPDMM 122

Query: 253 PKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPRG 312
           PK                                              VA LG+ LGPRG
Sbjct: 123 PK----------------------------------------------VAKLGRQLGPRG 182

Query: 313 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIKS 372
           LMP+PK GTV T+L  AIAEFK GK+E+RAD+TGIVH+ FGKA FS EDLL+NL A  ++
Sbjct: 183 LMPSPKGGTVTTDLTGAIAEFKAGKLEFRADRTGIVHVQFGKASFSAEDLLVNLKALQET 234

Query: 373 IETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKL 412
           ++ N+PSGAKG YW++ ++ SSMGPSI+++I  + D KL
Sbjct: 243 VDRNRPSGAKGRYWRTVYVSSSMGPSIQVDISALRDLKL 234

[Close]

BLAST of CaUC10G192530 vs. ExPASy Swiss-Prot
Match: Q3MA18 (50S ribosomal protein L1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rplA PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 7.1e-69
Identity = 142/283 (50.18%), Postives = 184/283 (65.02%), Query Frame = 0


Query: 133 RRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLRA 192
           ++ S+R  E+Q   E+ +EY    A+SLLKE  + KF E AEAH RL IDPKY DQQLR 
Sbjct: 3   KKVSRRLRELQAKVED-REYGPLDALSLLKETATAKFAEAAEAHIRLGIDPKYTDQQLRT 62

Query: 193 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 252
           TV LPKGTGQ V+VAV+ +GEK  EA NAGAD+ G E+LI++I+ G MDFDKLIA+PD+M
Sbjct: 63  TVALPKGTGQIVRVAVIARGEKVTEASNAGADVFGSEELIDEIQKGRMDFDKLIATPDVM 122

Query: 253 PKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPRG 312
           P+                                              VA LGK+LGPRG
Sbjct: 123 PQ----------------------------------------------VAKLGKMLGPRG 182

Query: 313 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIKS 372
           LMP+PK GTV  ++  AIAEFK GK+E+RAD+TGIVH+ FGKA FS EDLL+NL A  ++
Sbjct: 183 LMPSPKGGTVTFDIASAIAEFKAGKLEFRADRTGIVHVMFGKASFSPEDLLVNLKALQET 238

Query: 373 IETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
           I+ N+PSGAKG YW++ ++ ++MGPSIR++I  + D+KL   A
Sbjct: 243 IDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKLTEAA 238

[Close]

BLAST of CaUC10G192530 vs. ExPASy Swiss-Prot
Match: Q8YLJ7 (50S ribosomal protein L1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rplA PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.6e-68
Identity = 142/283 (50.18%), Postives = 184/283 (65.02%), Query Frame = 0


Query: 133 RRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLRA 192
           ++ S+R  E+Q   E+ +EY    A+ LLKE  + KF E AEAH RL IDPKY DQQLR 
Sbjct: 3   KKVSRRLRELQAKVED-REYGPLDALGLLKETATAKFGEAAEAHIRLGIDPKYTDQQLRT 62

Query: 193 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 252
           TV LPKGTGQ V+VAV+ +GEK  EA NAGAD+VG E+LI++I+ G MDFDKLIA+PD+M
Sbjct: 63  TVALPKGTGQIVRVAVIARGEKVTEASNAGADVVGSEELIDEIQKGRMDFDKLIATPDVM 122

Query: 253 PKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPRG 312
           P+                                              VA LGK+LGPRG
Sbjct: 123 PQ----------------------------------------------VAKLGKMLGPRG 182

Query: 313 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIKS 372
           LMP+PK GTV  ++  AIAEFK GK+E+RAD+TGIVH+ FGKA FS EDLL+NL A  ++
Sbjct: 183 LMPSPKGGTVTFDVASAIAEFKAGKLEFRADRTGIVHVMFGKASFSPEDLLVNLKALQET 238

Query: 373 IETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
           I+ N+PSGAKG YW++ ++ ++MGPSIR++I  + D+KL   A
Sbjct: 243 IDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKLTEAA 238

[Close]

BLAST of CaUC10G192530 vs. ExPASy TrEMBL
Match: A0A6J1G9U2 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111452270 PE=3 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 1.1e-170
Identity = 329/403 (81.64%), Postives = 340/403 (84.37%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSPDC 72
           MAACTSTSPSSLMLT ASSSV+PQDL SSIVSF GK +FSTIKSFSS HFLCRP RS D 
Sbjct: 1   MAACTSTSPSSLMLTYASSSVYPQDLTSSIVSFNGKSRFSTIKSFSSCHFLCRPRRSADW 60

Query: 73  VFLHFQRRARHHVIVAALAAEANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALPLKRD 132
           + L+FQRRARHHVIVAALAAEANVAE EAE +EGVA  GT TV APKPKKGKAALPLKRD
Sbjct: 61  ICLNFQRRARHHVIVAALAAEANVAEAEAEAEEGVAVGGTDTVAAPKPKKGKAALPLKRD 120

Query: 133 RRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLRA 192
           RRRSKRFLEIQKLRENKKEY++KTAISLLKEM STKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RRRSKRFLEIQKLRENKKEYEIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 193 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 252
           TVNLPKGTGQTV+VAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240

Query: 253 PKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPRG 312
           PK                                              VASLGKLLGPRG
Sbjct: 241 PK----------------------------------------------VASLGKLLGPRG 300

Query: 313 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIKS 372
           LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLL+NLLAAIKS
Sbjct: 301 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLVNLLAAIKS 357

Query: 373 IETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
           +ETNKP+GAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPS A
Sbjct: 361 VETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSTA 357

[Close]

BLAST of CaUC10G192530 vs. ExPASy TrEMBL
Match: A0A6J1KEE5 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111493089 PE=3 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 3.3e-170
Identity = 329/403 (81.64%), Postives = 340/403 (84.37%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSPDC 72
           MAACTSTSPSSLMLT ASSSV+PQDLASSIVSF GK +FSTIKSFSS HFLCRP RS D 
Sbjct: 1   MAACTSTSPSSLMLTYASSSVYPQDLASSIVSFNGKSRFSTIKSFSSCHFLCRPRRSADW 60

Query: 73  VFLHFQRRARHHVIVAALAAEANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALPLKRD 132
           + L+FQRRARHHVIVAALAAEANVAE EAE +EGVA  GT TV APKPKKGKAALPLKRD
Sbjct: 61  ICLNFQRRARHHVIVAALAAEANVAEAEAEAEEGVAVGGTDTVAAPKPKKGKAALPLKRD 120

Query: 133 RRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLRA 192
           RRRSKRFLEIQKLRENKKEY++KTAISLLKEM STKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RRRSKRFLEIQKLRENKKEYEIKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 193 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 252
           TVNLPKGTGQTV+VAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDMM 240

Query: 253 PKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPRG 312
           PK                                              VASLGKLLGPRG
Sbjct: 241 PK----------------------------------------------VASLGKLLGPRG 300

Query: 313 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIKS 372
           LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLL+NLLAAIKS
Sbjct: 301 LMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLVNLLAAIKS 357

Query: 373 IETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
           +ETNKP+GAKGVYWKSAHICSSMGPSIRLNIREMLDFKL S A
Sbjct: 361 VETNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLSSTA 357

[Close]

BLAST of CaUC10G192530 vs. ExPASy TrEMBL
Match: A0A6J1DFM3 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020374 PE=3 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 7.4e-170
Identity = 332/407 (81.57%), Postives = 340/407 (83.54%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSPDC 72
           MA CTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIK+FSS+HFLCRP RS D 
Sbjct: 1   MATCTSTSPSSLMLTSASSSVHPQDLASSIVSFKGKPQFSTIKAFSSAHFLCRPRRSTDW 60

Query: 73  VFLHFQRRARHHVIVAALAAE----ANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALP 132
           +FLHFQRRARHHVIVAALAAE        E EA+E+EG+  A  ATV APKPKKGKAALP
Sbjct: 61  IFLHFQRRARHHVIVAALAAEXXXXXXXXEAEAKEEEGLDGA-AATVAAPKPKKGKAALP 120

Query: 133 LKRDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQ 192
           LKRDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEM STKFVETAEAHFRLNIDPKYNDQ
Sbjct: 121 LKRDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMASTKFVETAEAHFRLNIDPKYNDQ 180

Query: 193 QLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIAS 252
           QLRATVNLPKGTGQTV+VAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIAS
Sbjct: 181 QLRATVNLPKGTGQTVRVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIAS 240

Query: 253 PDMMPKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLL 312
           PDMMPK                                              VASLGKLL
Sbjct: 241 PDMMPK----------------------------------------------VASLGKLL 300

Query: 313 GPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLA 372
           GPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLA
Sbjct: 301 GPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLA 360

Query: 373 AIKSIETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
           AIKS+ETNKPSGAKGVYWKS HICSSMGPSIRLNIREMLDFKLPS A
Sbjct: 361 AIKSVETNKPSGAKGVYWKSTHICSSMGPSIRLNIREMLDFKLPSSA 360

[Close]

BLAST of CaUC10G192530 vs. ExPASy TrEMBL
Match: A0A5D3BLK6 (Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold474G00110 PE=3 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 9.0e-168
Identity = 334/404 (82.67%), Postives = 341/404 (84.41%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSV-HPQDLASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSPD 72
           MAACTST PSSLMLTSASSSV  PQDLASSIVSFKGKPQ  TIKSFSSS+FLCR  RS D
Sbjct: 1   MAACTSTPPSSLMLTSASSSVPPPQDLASSIVSFKGKPQIPTIKSFSSSNFLCRSRRSAD 60

Query: 73  CVFLHFQRRARHHVIVAALAAEANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALPLKR 132
            VFL+FQRRAR HVIVAALAAEANVAEVEAEE+E VAAA  AT TAPKPKKGKAALPLKR
Sbjct: 61  WVFLNFQRRARQHVIVAALAAEANVAEVEAEEEEAVAAA--ATATAPKPKKGKAALPLKR 120

Query: 133 DRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLR 192
           DRRRSKRFLEIQKLRENKKEYDL TAISLLKEM STKFVE+AEAHFRLNIDPKYNDQQLR
Sbjct: 121 DRRRSKRFLEIQKLRENKKEYDLTTAISLLKEMSSTKFVESAEAHFRLNIDPKYNDQQLR 180

Query: 193 ATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM 252
           ATVNLPKGTGQTVKVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM
Sbjct: 181 ATVNLPKGTGQTVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM 240

Query: 253 MPKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPR 312
           MPK                                              VASLGKLLGPR
Sbjct: 241 MPK----------------------------------------------VASLGKLLGPR 300

Query: 313 GLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIK 372
           GLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKA+FSEEDLLINLLAAIK
Sbjct: 301 GLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKANFSEEDLLINLLAAIK 356

Query: 373 SIETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
           SIETNKPSGAKGVYWKSAHICSSMGPSIRLNIR+MLDFKLPS A
Sbjct: 361 SIETNKPSGAKGVYWKSAHICSSMGPSIRLNIRDMLDFKLPSSA 356

[Close]

BLAST of CaUC10G192530 vs. ExPASy TrEMBL
Match: A0A0A0LD08 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_3G687730 PE=3 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 9.0e-168
Identity = 332/404 (82.18%), Postives = 342/404 (84.65%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSVH-PQDLASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSPD 72
           MAACTST PSSLMLTSASSSVH PQDLASS+VSFK K Q STIKSFSSS+FLCR  RSPD
Sbjct: 1   MAACTSTPPSSLMLTSASSSVHPPQDLASSLVSFKAKLQISTIKSFSSSNFLCRSRRSPD 60

Query: 73  CVFLHFQRRARHHVIVAALAAEANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALPLKR 132
            VFL+FQRRAR HVIVAA AAEANVAEVEAEE+EGVAAA TA  TAPKPKKGKAALPLKR
Sbjct: 61  WVFLNFQRRARQHVIVAAFAAEANVAEVEAEEEEGVAAAPTA--TAPKPKKGKAALPLKR 120

Query: 133 DRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLR 192
           DRRRSKRFLEIQKLRENKKEYDL TAISLLKEM STKF+E+AEAHFRLNIDPKYNDQQLR
Sbjct: 121 DRRRSKRFLEIQKLRENKKEYDLTTAISLLKEMSSTKFIESAEAHFRLNIDPKYNDQQLR 180

Query: 193 ATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM 252
           ATVNLPKGTGQTVKVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM
Sbjct: 181 ATVNLPKGTGQTVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPDM 240

Query: 253 MPKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPR 312
           MPK                                              VASLGKLLGPR
Sbjct: 241 MPK----------------------------------------------VASLGKLLGPR 300

Query: 313 GLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIK 372
           GLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKA+FSEEDLLINLLAAIK
Sbjct: 301 GLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKANFSEEDLLINLLAAIK 356

Query: 373 SIETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPSDA 416
           SIETNKPSGAKGVYW+SAHICSSMGPSIRLNIR+MLDFKLPS A
Sbjct: 361 SIETNKPSGAKGVYWRSAHICSSMGPSIRLNIRDMLDFKLPSSA 356

[Close]

BLAST of CaUC10G192530 vs. TAIR 10
Match: AT3G63490.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 417.2 bits (1071), Expect = 1.6e-116
Identity = 244/403 (60.55%), Postives = 280/403 (69.48%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSVHPQDL--ASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSP 72
           MAAC   + SSLML  A++S   QDL    S+ SF      S     S    L   +R  
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLFSFAS----SRPNHLSFPLLLLGGSRDR 60

Query: 73  DCVFLHFQRRARHHVIVAALAAEANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALPLK 132
            C  +   R + H  IV+A+AAE   A+++ EED  +    TA +  PKPKKGKAAL LK
Sbjct: 61  RCAAI--DRASNHKFIVSAVAAE---ADLDTEED--LEQTATAVLDPPKPKKGKAALVLK 120

Query: 133 RDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQL 192
           RDR RSKRFLEIQKLRE KKEYD+ TAISLLK+  +T+FVE+ EAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQL 180

Query: 193 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPD 252
           RATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFM+FDKLIASPD
Sbjct: 181 RATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPD 240

Query: 253 MMPKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGP 312
           MM K                                              VA LGK+LGP
Sbjct: 241 MMVK----------------------------------------------VAGLGKILGP 300

Query: 313 RGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAI 372
           RGLMPNPKAGTV  N+PQAI EFK+GKVE+RADKTGIVH+PFGK +F+EEDLLIN LAA+
Sbjct: 301 RGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVNFTEEDLLINFLAAV 344

Query: 373 KSIETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLDFKLPS 414
           KS+ETNKP GAKGVYWKSAHICSSMGPSI+LNIREM+DFK P+
Sbjct: 361 KSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPPT 344

[Close]

BLAST of CaUC10G192530 vs. TAIR 10
Match: AT3G63490.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 273.1 bits (697), Expect = 3.7e-73
Identity = 180/344 (52.33%), Postives = 211/344 (61.34%), Query Frame = 0


Query: 13  MAACTSTSPSSLMLTSASSSVHPQDL--ASSIVSFKGKPQFSTIKSFSSSHFLCRPTRSP 72
           MAAC   + SSLML  A++S   QDL    S+ SF      S     S    L   +R  
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLFSFAS----SRPNHLSFPLLLLGGSRDR 60

Query: 73  DCVFLHFQRRARHHVIVAALAAEANVAEVEAEEDEGVAAAGTATVTAPKPKKGKAALPLK 132
            C  +   R + H  IV+A+AAE   A+++ EED  +    TA +  PKPKKGKAAL LK
Sbjct: 61  RCAAI--DRASNHKFIVSAVAAE---ADLDTEED--LEQTATAVLDPPKPKKGKAALVLK 120

Query: 133 RDRRRSKRFLEIQKLRENKKEYDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQL 192
           RDR RSKRFLEIQKLRE KKEYD+ TAISLLK+  +T+FVE+ EAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQL 180

Query: 193 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMDFDKLIASPD 252
           RATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFM+FDKLIASPD
Sbjct: 181 RATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPD 240

Query: 253 MMPKIYFLDFVDQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGP 312
           MM K                                              VA LGK+LGP
Sbjct: 241 MMVK----------------------------------------------VAGLGKILGP 282

Query: 313 RGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKTGIVHLPFGK 355
           RGLMPNPKAGTV  N+PQ+    ++GK+     K G+     GK
Sbjct: 301 RGLMPNPKAGTVTANIPQS---SRRGKLNSEQTKLGLFTFHLGK 282

[Close]

BLAST of CaUC10G192530 vs. TAIR 10
Match: AT2G42710.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-34
Identity = 91/270 (33.70%), Postives = 138/270 (51.11%), Query Frame = 0


Query: 144 KLRENKKE-YDLKTAISLLKEMGSTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQ 203
           +L+  KK  +DL  AI  +K     KF ET EAH RL I+   ++  +R T+ LP    +
Sbjct: 179 ELKHGKKPIFDLMEAIREIKGNAKAKFDETLEAHVRLGIEKGRSELIVRGTLALPHSVKK 238

Query: 204 TVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQI-KGGFMDFDKLIASPDMMPKIYFLDFV 263
            VKVA   +G   ++AK AGAD+VGG +LIE+I K G +DFD+ +A+P MMP++Y     
Sbjct: 239 DVKVAFFAEGADAEDAKAAGADVVGGLELIEEILKSGKIDFDRCLATPKMMPRVY----- 298

Query: 264 DQSRCLVAAAKFEPVLKIDKVSYTKCFLALSIYPLCQLSVASLGKLLGPRGLMPNPKAGT 323
                                                     + ++L   GLMPNPK G+
Sbjct: 299 -----------------------------------------KISRILNNHGLMPNPKQGS 358

Query: 324 VATNLPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEEDLLINLLAAIKSIETNKPSGA 383
           V  ++ +A+ + K G  ++R DKT I+H+P GK  FSEE L  N+ A + ++   KP+G 
Sbjct: 359 VTKDVTKAVKDAKAGHTKFRMDKTSILHVPLGKMSFSEEALRENVGAFMNALLLAKPAGL 402

Query: 384 KGV-----YWKSAHICSSMGPSIRLNIREM 407
           K       Y  + H+CS+MG    ++I+ +
Sbjct: 419 KKTSKYAGYVNAFHLCSTMGKGYPVSIQSL 402

The following BLAST results are available for this feature:

BLAST of CaUC10G192530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948661.1	2.3e-170	81.64	50S ribosomal protein L1, chloroplastic-like [Cucurbita moschata]	[more]
XP_022998464.1	6.8e-170	81.64	50S ribosomal protein L1, chloroplastic-like [Cucurbita maxima]	[more]
XP_038905945.1	8.9e-170	83.42	50S ribosomal protein L1, chloroplastic-like [Benincasa hispida]	[more]
KAG7036595.1	1.2e-169	81.39	50S ribosomal protein L1, chloroplastic [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022152718.1	1.5e-169	81.57	LOW QUALITY PROTEIN: 50S ribosomal protein L1, chloroplastic-like [Momordica cha...	[more]

BLAST of CaUC10G192530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LY66	2.2e-115	60.55	50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 ...	[more]
Q9LE95	1.6e-113	59.66	50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=...	[more]
B0JNQ5	7.5e-71	51.97	50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 G...	[more]
Q3MA18	7.1e-69	50.18	50S ribosomal protein L1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937)...	[more]
Q8YLJ7	1.6e-68	50.18	50S ribosomal protein L1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)...	[more]

BLAST of CaUC10G192530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9U2	1.1e-170	81.64	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111452270 PE=3 SV=1	[more]
A0A6J1KEE5	3.3e-170	81.64	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111493089 PE=3 SV=1	[more]
A0A6J1DFM3	7.4e-170	81.57	Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020374 PE=3 SV=1	[more]
A0A5D3BLK6	9.0e-168	82.67	Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold474G00...	[more]
A0A0A0LD08	9.0e-168	82.18	Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_3G687730 PE=3 SV=1	[more]

BLAST of CaUC10G192530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63490.1	1.6e-116	60.55	Ribosomal protein L1p/L10e family	[more]
AT3G63490.2	3.7e-73	52.33	Ribosomal protein L1p/L10e family	[more]
AT2G42710.1	1.2e-34	33.70	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 261..332 e-value: 1.3E-10 score: 43.4
None	No IPR available	GENE3D	3.30.190.20		coord: 333..411 e-value: 1.3E-24 score: 88.3
None	No IPR available	GENE3D	3.30.190.20		coord: 150..260 e-value: 2.8E-32 score: 113.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..29
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 149..408
None	No IPR available	PANTHER	PTHR23105:SF110	MITOCHONDRIAL RIBOSOMAL PROTEIN, LARGE	coord: 149..408
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..16 score: 7.0
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 161..255 e-value: 3.6E-17 score: 62.8 coord: 302..397 e-value: 5.8E-22 score: 78.4
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 154..401 e-value: 5.39555E-67 score: 210.118
IPR005878	Ribosomal protein L1, bacterial-type	HAMAP	MF_01318_B	Ribosomal_L1_B	coord: 133..406 score: 37.671501
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 138..257
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 301..403

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G192530.1	CaUC10G192530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding