CaUC10G192030 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G192030
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr10: 26533691 .. 26536066 (+)
RNA-Seq ExpressionCaUC10G192030
SyntenyCaUC10G192030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCTTCCGATACGTCGGCCATTCGGTAATTTTGATCTTTCGGACAAGAACTTTCAAGGCCGTATCCTGATAATTGATAAGGGTCAAGCCAAGCCCAGTAGCCTCCTCTCTCCGTCACCGCTTCCTTTCCGATTCCGGCCGCCGCCTCCGCCTTCTCCTTCTTCTTCACTTCATGCCTTTCTTCTTCGTCTGTTCGTGAGGAAGCACCGTCTCGAGAATCCACCTGCAGAGTTCTGTTGAGGGATTTGCCATTTTTTTTGCCGATGGGTGAAGAGCGGCTTTGATCGAAGGGCTTGAGATTGCCCGAATCTTCGTCTGATTGCAGGTTTTTTTCTATTCTGGGTTATGAATTTCTTCTTAGTGGTTTTGAAGATTGTTTTGGTTTGATGTATTGGGATCTTTCTTGGGTCGTTGCTCTAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTCCCCGGAAAACTTCAGTTTCTGTTTTTCACGGGGGAATTTGGATTTCGTGACAATTTGGAGAGTTTCTGTTCTAGTTTGTGGATAATTAAACTAAAATTGTCTAACAATGGATAAAATTGAAGCTTAGGGAGACTTTTTTTTTTTTTTTTAATTTTTTTTAGGGTATGTGGAATTCTTGAGTCTTTTGTAGTGAAAGAAGTGAAGTGTTTTGATTGTTCATTGGCAGGAGGAACGATGGTTCGATTGGTTTCTTGA

mRNA sequence

ATGATTCTTCCGATACGTCGGCCATTCGGTAATTTTGATCTTTCGGACAAGAACTTTCAAGGCCGTATCCTGATAATTGATAAGGGTCAAGCCAAGCCCAGTAGCCTCCTCTCTCCGTCACCGCTTCCTTTCCGATTCCGGCCGCCGCCTCCGCCTTCTCCTTCTTCTTCACTTCATGCCTTTCTTCTTCGTCTGTTCGTGAGGAAGCACCGTCTCGAGAATCCACCTGCAGAGTTTTTTTCTATTCTGGGTTATGAATTTCTTCTTAGTGGTTTTGAAGATTGTTTTGGTTTGATGTATTGGGATCTTTCTTGGGTCGTTGCTCTAGGAGGAACGATGGTTCGATTGGTTTCTTGA

Coding sequence (CDS)

ATGATTCTTCCGATACGTCGGCCATTCGGTAATTTTGATCTTTCGGACAAGAACTTTCAAGGCCGTATCCTGATAATTGATAAGGGTCAAGCCAAGCCCAGTAGCCTCCTCTCTCCGTCACCGCTTCCTTTCCGATTCCGGCCGCCGCCTCCGCCTTCTCCTTCTTCTTCACTTCATGCCTTTCTTCTTCGTCTGTTCGTGAGGAAGCACCGTCTCGAGAATCCACCTGCAGAGTTTTTTTCTATTCTGGGTTATGAATTTCTTCTTAGTGGTTTTGAAGATTGTTTTGGTTTGATGTATTGGGATCTTTCTTGGGTCGTTGCTCTAGGAGGAACGATGGTTCGATTGGTTTCTTGA

Protein sequence

MILPIRRPFGNFDLSDKNFQGRILIIDKGQAKPSSLLSPSPLPFRFRPPPPPSPSSSLHAFLLRLFVRKHRLENPPAEFFSILGYEFLLSGFEDCFGLMYWDLSWVVALGGTMVRLVS
Homology
[Close]
BLAST of CaUC10G192030 vs. NCBI nr
Match: KAA0052794.1 (uncharacterized protein E6C27_scaffold1614G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 9.8e-05
Identity = 32/49 (65.31%), Postives = 34/49 (69.39%), Query Frame = 0 

Query: 33  PSSLLSPSPLPFRFRPPPPPSPSSSLHAFLLRLFVRKHRLENPPAEFFS 82
           P+ LLSP PLPFRFRPPP P   S LH FLL  FV K+ L NPPA F S
Sbjct: 71  PTILLSPPPLPFRFRPPPLP---SLLHPFLLPPFVWKYSLHNPPAYFCS 116

[Close]
BLAST of CaUC10G192030 vs. ExPASy TrEMBL
Match: A0A5A7UBN5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1614G00060 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.7e-05
Identity = 32/49 (65.31%), Postives = 34/49 (69.39%), Query Frame = 0 

Query: 33  PSSLLSPSPLPFRFRPPPPPSPSSSLHAFLLRLFVRKHRLENPPAEFFS 82
           P+ LLSP PLPFRFRPPP P   S LH FLL  FV K+ L NPPA F S
Sbjct: 71  PTILLSPPPLPFRFRPPPLP---SLLHPFLLPPFVWKYSLHNPPAYFCS 116

The following BLAST results are available for this feature:
BLAST of CaUC10G192030 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0052794.19.8e-0565.31uncharacterized protein E6C27_scaffold1614G00060 [Cucumis melo var. makuwa][more]
BLAST of CaUC10G192030 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC10G192030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UBN54.7e-0565.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of CaUC10G192030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G192030.1CaUC10G192030.1mRNA