CaUC10G187810 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAACCAAAGGAGGAATGACTGCACCATGGTATACTCAAGTGGGCCATATGGTGAAAACATACTCGATTGCTGGCTATTTCCCTGAGATCACTGGAGCATTCACAATGAAGTTGTGGTTGGAGGAGAAGCCTCAATACAACTATATGTCGAACTCATGCATCAAGGGTGAGTGTGGGCACTATCCGCAAGTGGTGTGGCGAAACTCAATGCATATTGAATGTGCTAGCTATAGTGTTATGTAAGAATAGTTCTCAATTCGTTATATGCAATTATGATCTTCCTCACAACATTATTGGAGAAAGAAAACTTATGATTCTTCACTCTAAAAGAGAAGGGAGTTAAAAAAGAGAAGTTATTAAGTGTTCTCCTCTATGCTAATGTAGCAACTTGATTCTTTATATTTTATTGAGACTACGTATTTAATCTCTATGAGAGAATATCTTAACCTATAATGGGATGGACAAACTCAATAACTTATAGGGTTGAACAAATATGTTATTGAATAATTTAATATGCAACAACGGTTGAAAATAAATCTTATTGTTATATATGTATAACTATGTACAAAAACCATTTACAAATTTCACCCAAAAAGTATATTTGTCACAAAGGCAATATTGATATTATTTCTTGATCAAGAAAATCTCGGTTATTATTAGCAATCGTACATTCTTAACCATAGTTAACTAACTTTTGTTATTTGATTTTTTTCTTAAATTCTTTTTGAGAAAAATCTTATTTTCAATCAATTATTTGCCATCTTGAATGAATTTTGCTCTATAAACTCAAGAATACCATAAGTCATTTGTAATTAAATTACTTATGTTAAAAACACGTTTAGAAGGAAAAAATTATTTATAACAAAATAAATAATTTCTCTTTAAAAAAATACTCAACTTTCGATTGCTTACAAAGACAAGATTAAAATACACGCCTTGTTCATAAAAACGTCTAAACTCTAATTTGACTACATTATCAAGTTCTGATAGTCGAATTATGCAATATAAATGTCATTAAAGAAGAAAACTAATTCCAAACTACAATTATTAATTAGTCCTTAATTAGGTTGTAATTGCAAAACCAAAAGGTCATTAAATAAGGCAAATGATCTTAAAGCGAAATGCACGATAGTTATTAGTCCTTAATTAGGGTGCAAGTGCAACTACAAAACAAAAATGTCACTAAAAAAGAAAAAAACAGATCATATTAATTAAGGTTTATCCTTCCTCTTCTCCATCACATTCTATATTTAATTTTCCATCTCTATAAATTCCTATCACTCTCTCATCTCAAAACCTACCATTTCATTTAAATTTTCATCAGAATGTGGACTCAAAAGCCTCTCATCGCCATTTTCTTGGCTACTTTCATGTTTATCCTATGCAAAGCACATGCTCAAAATTCCCCTCGAGACTATGTTGCTTTACACAATCGTGCTCGTGCACAGGTTGGTGTTGGGCCCGTTACATGGAATAAAACATTAGCTGCCTATGCTAACAAAAGGAGGAACGATTGTGCCATGGTTTACTCAGGTGGGCCATACGGCGAAAACATAGCTGCAGGTTACTACCCTGAAATCACAGGAATATTTGCAGTGAAGTTGTGGGTGGAGGAGAAACCTCTGTACAACTATACGTCGAACTTGTGCATCAAGGGCGAGTGTAAACATTACACTCAGGTGGTGTGGAAAAACTCGGTGCATATTGGATGTGCAAGAGTGCCCTGTAAAAGCAACTCTCAATTCGTTATATGCAATTATGATCCTCCTGGCAACATTTTTGGAAAGAGGCCTTATGATTCTTCAATTTAA ATGCCAACCAAAGGAGGAATGACTGCACCATGGTATACTCAAGTGGGCCATATGGTGAAAACATACTCGATTGCTGGCTATTTCCCTGAGATCACTGGAGCATTCACAATGAAGTTGTGGTTGGAGGAGAAGCCTCAATACAACTATATGTCGAACTCATGCATCAAGGGTGAGTGTGGGCACTATCCGCAAGTGGTGTGGCGAAACTCAATGCATATTGAATGTGCTAGCTATAGTGTTATAATGTGGACTCAAAAGCCTCTCATCGCCATTTTCTTGGCTACTTTCATGTTTATCCTATGCAAAGCACATGCTCAAAATTCCCCTCGAGACTATGTTGCTTTACACAATCGTGCTCGTGCACAGGTTGGTGTTGGGCCCGTTACATGGAATAAAACATTAGCTGCCTATGCTAACAAAAGGAGGAACGATTGTGCCATGGTTTACTCAGGTGGGCCATACGGCGAAAACATAGCTGCAGGTTACTACCCTGAAATCACAGGAATATTTGCAGTGAAGTTGTGGGTGGAGGAGAAACCTCTGTACAACTATACGTCGAACTTGTGCATCAAGGGCGAGTGTAAACATTACACTCAGGTGGTGTGGAAAAACTCGGTGCATATTGGATGTGCAAGAGTGCCCTGTAAAAGCAACTCTCAATTCGTTATATGCAATTATGATCCTCCTGGCAACATTTTTGGAAAGAGGCCTTATGATTCTTCAATTTAA ATGCCAACCAAAGGAGGAATGACTGCACCATGGTATACTCAAGTGGGCCATATGGTGAAAACATACTCGATTGCTGGCTATTTCCCTGAGATCACTGGAGCATTCACAATGAAGTTGTGGTTGGAGGAGAAGCCTCAATACAACTATATGTCGAACTCATGCATCAAGGGTGAGTGTGGGCACTATCCGCAAGTGGTGTGGCGAAACTCAATGCATATTGAATGTGCTAGCTATAGTGTTATAATGTGGACTCAAAAGCCTCTCATCGCCATTTTCTTGGCTACTTTCATGTTTATCCTATGCAAAGCACATGCTCAAAATTCCCCTCGAGACTATGTTGCTTTACACAATCGTGCTCGTGCACAGGTTGGTGTTGGGCCCGTTACATGGAATAAAACATTAGCTGCCTATGCTAACAAAAGGAGGAACGATTGTGCCATGGTTTACTCAGGTGGGCCATACGGCGAAAACATAGCTGCAGGTTACTACCCTGAAATCACAGGAATATTTGCAGTGAAGTTGTGGGTGGAGGAGAAACCTCTGTACAACTATACGTCGAACTTGTGCATCAAGGGCGAGTGTAAACATTACACTCAGGTGGTGTGGAAAAACTCGGTGCATATTGGATGTGCAAGAGTGCCCTGTAAAAGCAACTCTCAATTCGTTATATGCAATTATGATCCTCCTGGCAACATTTTTGGAAAGAGGCCTTATGATTCTTCAATTTAA MPTKGGMTAPWYTQVGHMVKTYSIAGYFPEITGAFTMKLWLEEKPQYNYMSNSCIKGECGHYPQVVWRNSMHIECASYSVIMWTQKPLIAIFLATFMFILCKAHAQNSPRDYVALHNRARAQVGVGPVTWNKTLAAYANKRRNDCAMVYSGGPYGENIAAGYYPEITGIFAVKLWVEEKPLYNYTSNLCIKGECKHYTQVVWKNSVHIGCARVPCKSNSQFVICNYDPPGNIFGKRPYDSSI Homology
BLAST of CaUC10G187810 vs. NCBI nr
Match: XP_038892639.1 (basic form of pathogenesis-related protein 1-like [Benincasa hispida]) HSP 1 Score: 323.6 bits (828), Expect = 1.5e-84 Identity = 146/165 (88.48%), Postives = 155/165 (93.94%), Query Frame = 0
BLAST of CaUC10G187810 vs. NCBI nr
Match: XP_022942003.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata]) HSP 1 Score: 261.5 bits (667), Expect = 7.0e-66 Identity = 114/166 (68.67%), Postives = 138/166 (83.13%), Query Frame = 0
BLAST of CaUC10G187810 vs. NCBI nr
Match: XP_023542698.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 259.2 bits (661), Expect = 3.5e-65 Identity = 113/166 (68.07%), Postives = 137/166 (82.53%), Query Frame = 0
BLAST of CaUC10G187810 vs. NCBI nr
Match: XP_023542710.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 254.6 bits (649), Expect = 8.6e-64 Identity = 111/166 (66.87%), Postives = 136/166 (81.93%), Query Frame = 0
BLAST of CaUC10G187810 vs. NCBI nr
Match: XP_023522017.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 253.1 bits (645), Expect = 2.5e-63 Identity = 111/166 (66.87%), Postives = 136/166 (81.93%), Query Frame = 0
BLAST of CaUC10G187810 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 6.4e-46 Identity = 84/155 (54.19%), Postives = 111/155 (71.61%), Query Frame = 0
BLAST of CaUC10G187810 vs. ExPASy Swiss-Prot
Match: P04284 (Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum OX=4081 GN=PR1B1 PE=1 SV=2) HSP 1 Score: 167.9 bits (424), Expect = 1.4e-40 Identity = 81/154 (52.60%), Postives = 106/154 (68.83%), Query Frame = 0
BLAST of CaUC10G187810 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 3.1e-40 Identity = 77/151 (50.99%), Postives = 102/151 (67.55%), Query Frame = 0
BLAST of CaUC10G187810 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3) HSP 1 Score: 166.4 bits (420), Expect = 4.0e-40 Identity = 78/151 (51.66%), Postives = 98/151 (64.90%), Query Frame = 0
BLAST of CaUC10G187810 vs. ExPASy Swiss-Prot
Match: Q41359 (Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 4.0e-40 Identity = 81/162 (50.00%), Postives = 106/162 (65.43%), Query Frame = 0
BLAST of CaUC10G187810 vs. ExPASy TrEMBL
Match: A0A6J1FTM8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447196 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 3.4e-66 Identity = 114/166 (68.67%), Postives = 138/166 (83.13%), Query Frame = 0
BLAST of CaUC10G187810 vs. ExPASy TrEMBL
Match: A0A6J1H3H8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460070 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63 Identity = 114/176 (64.77%), Postives = 140/176 (79.55%), Query Frame = 0
BLAST of CaUC10G187810 vs. ExPASy TrEMBL
Match: A0A6J1JHT5 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111485854 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 2.1e-63 Identity = 112/165 (67.88%), Postives = 133/165 (80.61%), Query Frame = 0
BLAST of CaUC10G187810 vs. ExPASy TrEMBL
Match: A0A6J1I9K6 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470478 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 2.7e-63 Identity = 111/164 (67.68%), Postives = 136/164 (82.93%), Query Frame = 0
BLAST of CaUC10G187810 vs. ExPASy TrEMBL
Match: A0A6J1EQJ7 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436551 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 6.0e-63 Identity = 109/166 (65.66%), Postives = 135/166 (81.33%), Query Frame = 0
BLAST of CaUC10G187810 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 170.2 bits (430), Expect = 2.0e-42 Identity = 81/153 (52.94%), Postives = 103/153 (67.32%), Query Frame = 0
BLAST of CaUC10G187810 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 168.3 bits (425), Expect = 7.5e-42 Identity = 80/155 (51.61%), Postives = 109/155 (70.32%), Query Frame = 0
BLAST of CaUC10G187810 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 ) HSP 1 Score: 163.3 bits (412), Expect = 2.4e-40 Identity = 75/155 (48.39%), Postives = 104/155 (67.10%), Query Frame = 0
BLAST of CaUC10G187810 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 ) HSP 1 Score: 161.8 bits (408), Expect = 7.0e-40 Identity = 71/154 (46.10%), Postives = 105/154 (68.18%), Query Frame = 0
BLAST of CaUC10G187810 vs. TAIR 10
Match: AT1G50050.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 156.0 bits (393), Expect = 3.9e-38 Identity = 76/143 (53.15%), Postives = 94/143 (65.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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