CaUC10G187760 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGACGTGGCAGACGTTTAGAGGAAGTGAATACGTGGACATCCTAGAAATGGCAACACCGGATAACTTCTCTCTCCTAGGGCACCGCGAGCGACGTGTCGGCGATCTATTCGACAAAACAACTTCCAAACGTCCTTTTGCTATTTCCACTTCTCCTGGATTTGGTGCGTACGAGGAAAGCTCTAGTCCACGCGAGGTAAAGCGCGTGCACTCAACGAGCTCTGTCGTGTCGACACGTACGGTAAATCACGGACTCCGGATTCTCTGTCGGAGGACAAGGAGTCTCGGATTGATTTACCGTAACGACATGTCGGCTGGAGAGAGCGAGTAGATATGTTTTTCCCTACTCGCAGTGGTTGGCTCGAATATACAAAGGGAGAAAACCACTGGGCGGTTTTGAAATGCGCCCAGGTTTTGGCACTGTTTAGCTGTCAAATGAAAAAACCGCTTTTAGCTTTTTTATATATATATTTATTTGTTTTAATTTTTTTTCTTAAAGCATATAATGCAACGATAGAAGGAGAGAAAAACATATCNATTGTGATAAGAAGAATAGACAATTCAACAAGCAGGCAAGTGACTTTCTCAAAGAGAAGAAGTGGATTATTGAAAAAGGCTAGAGAGCTTTCAATTCTTTGTGATGCTGAAGTTGGATTGATCATTTTTTCGAGCACTGGCAAACTCTATGATTATTCCAGCTCCAGGTCAGATCCCTTTCTCTTTCCACAATTCTCTCTCTCTATATATATATATAATTTCTTTCCATATATATATACACTCTTTTCATAATTTTATCACCTGGGTTTTCCTTCTTTTAGTTTTTTTTNCTCTCCAGAAAAGCTACAAAAGAAGAAGCAAATCCACAGACCCTTAAGCAGTAA ATGGAAGACACGTTTAGAGGAAGTGAATACGTGGACATCCTAGAAATGGCAACACCGGATAACTTCTCTCTCCTAGGGCACCGCGAGCGACGTGTCGGCGATCTATTCGACAAAACAACTTCCAAACGTCCTTTTGCTATTTCCACTTCTCCTGGATTTGGTGCGTACGAGGAAAGCTCTAGTCCACGCGAGGTAAAGCGCGTGCACTCAACGAGCTCTGTCGTGTCGACACGTACGGTAAATCACGGACTCCGGATTCTCTGTCGGAGGACAAGGAGTCTCGGATTGATTTACCGTAACGACATGTCGGCTGGAGAGAGCGAATATGTTTTTCCCTACTCGCAGTGGTTGGCTCGAATATACAAAGGGAGAAAACCACTGGGCGGTTTTGAAATGCGCCCAGCATATAATGCAACGATAGAAGGAGAGAAAAACATATCNATTGTGATAAGAAGAATAGACAATTCAACAAGCAGGCAAGTGACTTTCTCAAAGAGAAGAAGTGGATTATTGAAAAAGGCTAGAGAGCTTTCAATTCTTTGTGATGCTGAAGTTGGATTGATCATTTTTTCGAGCACTGGCAAACTCTATGATTATTCCAGCTCCAGAAAAGCTACAAAAGAAGAAGCAAATCCACAGACCCTTAAGCAGTAA ATGGAAGACACGTTTAGAGGAAGTGAATACGTGGACATCCTAGAAATGGCAACACCGGATAACTTCTCTCTCCTAGGGCACCGCGAGCGACGTGTCGGCGATCTATTCGACAAAACAACTTCCAAACGTCCTTTTGCTATTTCCACTTCTCCTGGATTTGGTGCGTACGAGGAAAGCTCTAGTCCACGCGAGGTAAAGCGCGTGCACTCAACGAGCTCTGTCGTGTCGACACGTACGGTAAATCACGGACTCCGGATTCTCTGTCGGAGGACAAGGAGTCTCGGATTGATTTACCGTAACGACATGTCGGCTGGAGAGAGCGAATATGTTTTTCCCTACTCGCAGTGGTTGGCTCGAATATACAAAGGGAGAAAACCACTGGGCGGTTTTGAAATGCGCCCAGCATATAATGCAACGATAGAAGGAGAGAAAAACATATCNATTGTGATAAGAAGAATAGACAATTCAACAAGCAGGCAAGTGACTTTCTCAAAGAGAAGAAGTGGATTATTGAAAAAGGCTAGAGAGCTTTCAATTCTTTGTGATGCTGAAGTTGGATTGATCATTTTTTCGAGCACTGGCAAACTCTATGATTATTCCAGCTCCAGAAAAGCTACAAAAGAAGAAGCAAATCCACAGACCCTTAAGCAGTAA MEDTFRGSEYVDILEMATPDNFSLLGHRERRVGDLFDKTTSKRPFAISTSPGFGAYEESSSPREVKRVHSTSSVVSTRTVNHGLRILCRRTRSLGLIYRNDMSAGESEYVFPYSQWLARIYKGRKPLGGFEMRPAYNATIEGEKNISIVIRRIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSSSRKATKEEANPQTLKQ Homology
BLAST of CaUC10G187760 vs. NCBI nr
Match: TYK29421.1 (hypothetical protein E5676_scaffold655G00120 [Cucumis melo var. makuwa]) HSP 1 Score: 112.1 bits (279), Expect = 6.2e-21 Identity = 56/68 (82.35%), Postives = 59/68 (86.76%), Query Frame = 0
BLAST of CaUC10G187760 vs. NCBI nr
Match: QHN94330.1 (MADS-box transcription factor [Arachis hypogaea]) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-19 Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of CaUC10G187760 vs. NCBI nr
Match: QHO30209.1 (MADS-box transcription factor [Arachis hypogaea] >QHO30210.1 MADS-box transcription factor [Arachis hypogaea]) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-19 Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of CaUC10G187760 vs. NCBI nr
Match: XP_020984555.1 (agamous-like MADS-box protein AGL16 isoform X7 [Arachis duranensis]) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-19 Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of CaUC10G187760 vs. NCBI nr
Match: XP_025613275.1 (agamous-like MADS-box protein AGL16 isoform X6 [Arachis hypogaea]) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-19 Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of CaUC10G187760 vs. ExPASy Swiss-Prot
Match: Q9SI38 (MADS-box transcription factor ANR1 OS=Arabidopsis thaliana OX=3702 GN=ANR1 PE=1 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20 Identity = 51/55 (92.73%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of CaUC10G187760 vs. ExPASy Swiss-Prot
Match: Q6Z6W2 (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS57 PE=1 SV=2) HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19 Identity = 48/59 (81.36%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of CaUC10G187760 vs. ExPASy Swiss-Prot
Match: Q9SZJ6 (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=1 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 7.8e-19 Identity = 51/71 (71.83%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of CaUC10G187760 vs. ExPASy Swiss-Prot
Match: Q6EP49 (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS27 PE=2 SV=2) HSP 1 Score: 95.1 bits (235), Expect = 1.0e-18 Identity = 46/55 (83.64%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of CaUC10G187760 vs. ExPASy Swiss-Prot
Match: A2RVQ5 (Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana OX=3702 GN=AGL16 PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.3e-18 Identity = 46/55 (83.64%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of CaUC10G187760 vs. ExPASy TrEMBL
Match: A0A0A0KWH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G181210 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 4.0e-26 Identity = 66/93 (70.97%), Postives = 74/93 (79.57%), Query Frame = 0
BLAST of CaUC10G187760 vs. ExPASy TrEMBL
Match: A0A5D3E1F8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00120 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.0e-21 Identity = 56/68 (82.35%), Postives = 59/68 (86.76%), Query Frame = 0
BLAST of CaUC10G187760 vs. ExPASy TrEMBL
Match: A0A6P5MJA7 (agamous-like MADS-box protein AGL16 isoform X7 OS=Arachis duranensis OX=130453 GN=LOC107461031 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 7.3e-20 Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of CaUC10G187760 vs. ExPASy TrEMBL
Match: A0A7J6GG12 (MADS-box domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_011981 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.6e-19 Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0
BLAST of CaUC10G187760 vs. ExPASy TrEMBL
Match: A0A7J6G0Q7 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_000040 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.6e-19 Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of CaUC10G187760 vs. TAIR 10
Match: AT2G14210.1 (AGAMOUS-like 44 ) HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21 Identity = 51/55 (92.73%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of CaUC10G187760 vs. TAIR 10
Match: AT4G37940.1 (AGAMOUS-like 21 ) HSP 1 Score: 95.5 bits (236), Expect = 5.6e-20 Identity = 51/71 (71.83%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of CaUC10G187760 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 ) HSP 1 Score: 94.0 bits (232), Expect = 1.6e-19 Identity = 46/55 (83.64%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of CaUC10G187760 vs. TAIR 10
Match: AT3G57230.2 (AGAMOUS-like 16 ) HSP 1 Score: 94.0 bits (232), Expect = 1.6e-19 Identity = 46/55 (83.64%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of CaUC10G187760 vs. TAIR 10
Match: AT2G22630.1 (AGAMOUS-like 17 ) HSP 1 Score: 87.8 bits (216), Expect = 1.2e-17 Identity = 48/71 (67.61%), Postives = 60/71 (84.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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