CaUC10G187720 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAATTCATCGCGTCTCTCTGTTCGGAATTCTTCTTCCAACTATCTCCTCGGAATTCTTCTCCGGTTTCTAGGTTTTCAGTTGTTGCTTCTTGTTCGGAATCATCTATGGCGGTTTCCTCATTCGGTGGCTCCAGATCATTTACTTTATTCATCATGCGAGGCTTCCGCTTCCAGGTAATGCCGTTTTTTCCTCAGTTTTCTTCTCATTTCCGATTAGCTTAGATTGATACGACGTGTTCTTCCGTGGTGTGATTCATCTGCCATTCCTAGTAGATGATCTTGATATTTGATCGTTGTGTATTGTTTTCTTAATGGAAGATGAGTTTCTTGTATCTAACGGATGCATGGCTGGAGTACTAACATCGGATGATTCTCAGATCAACTGTTTGAGAGTTTATTTTTGTTTTATTTTGAATTTGGACGCGCTGTGTAAAATATGCTAAGCTTACGTGTTTTTATATATTTCAACTGCATGATGAGTTGTCTAATTTTCTCACAGACTGTAGCACCAGGGACATTGCATCCATGCTATTTTCTACATATCAGTTGGTTTCTATTAAAGTAATCTAGAAATCAATGTCTTGCAATACTTGCTCATTATCTATGAAACTTTGACGTTATGATAGGTGAAAGCTTGGGCTGTTGGATGGTTGGCCACGACGAAAATGGGTGTGAAATAAAAGGTACTTTTGCAATATTCATTTATTTGAATCTTTTTGCGTTTTTGGTGACTTTAAAACTGGTCGCCAAGACACAATCACAAAATCCAAGGAATTGTCATTTAGGAGGAAATTTCAAGTGGCCTGTTGAAAAGTTTAACTGTTATTATGAGTTCAATGGCAGGAAAGCTAACCTTATGTTTTGGAATTAAGTCTCCATTTTATACCTGTATAATTTTTATCATGACCTTGTATGATATCATATTCTTGTTTAGTTCTGCACTTTAGGTATTGCCATTAGTTATGGTTTATATTGTTTACCGAGTTTTATTGGACGACCCTGCAATGGCAGGAACTTCACACACAACGTAGCTTAGTTGTACCTTAGATGCTCCGTACTAAGGTTCATGTCTCTACCTAATTGGGATTTTCTTCGTCAGATATGGACTTTACTAGCTGATATAAGGATTCTTGTTATTTTTTGTCTATATTAAGTATTTCTACTTATATCATGAATGGTTAACATGCATATCATGCTGAATTCATGTTGCTGATAATTGAGGTCTCTTATCAAAAATAGAAGTCAACAATTAAAAAACCCTGAGGAGGTAGAATATTGTGGAATCCTTCACAATAGTATCTCTACAGATCCATCAAGTGTTTTCTCTGGCTCAAAACCACAATTGTTGATGTGAATTTTGTCTAGCCATTAAATGTTATTCTAATATTAGTCTTTCAAAATCCTAGAAATGAATCAAAATAAAAATCACTGATGACATATAAGAATTCATTATAATCGAAGTATATAGGAATGAATATTTAATTTTTCTACTCTAATTCTTGAACTACAATTAACTTGTAATCCAATGGAAATCCTGATCTACACTGATTCTATAACTATCCAACCTATGTTGTTTTGCTATTTATGGTACATGGCATATCACAGTTACCCCCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAGAAAAAAGAAAGGAAAAGAAAAACAGTACCGAAATGCAACTGACAGCTTGCATATCGTTCCTTTGCCTATTATGTATTGTTAGCTAAAAGAAATGTTTCATGTTGGTCGTATTTTGTAAGATAGACCTTAATTGACTCTTATAGTTGTACTACAGCCAGAGAAAATTAGAATTATTATAATGGCAAATCAGTCTGATATTGTTGATGTCTTGTGCAATATCAAATGATAAATTGATGATATAATTGGAGACTTTTGGAAAAAGTACGTTAGGTTGGTACTTCTTATCTAAATAATTTAGGTTGGTACCCATTGGCCTTGCCACTAGCTTATATAAAATCATTGCTTGCTAGCCCAAATATCATTACTTTCAGAAATTGGAGGGTGGTATTTCCAAGATTGACTTTGAGAAAGTTTATGATTTTGTGGATCAGGTCTCCTTGTTAAAGTGTGTGTAGAGAGGATTTGAATTAAATGGAGATCCAGGATCCTGCCTTTAGTTGGCTAATATTTTCATTGATCAACTTGTTAAAGTGTGTGTAGAGAGGATTTGAATTAAATGGAGATCCAGGATCCTGCCTTTAGTTGGCTAATATTTTCATTTTGATCAATGGGAAACCCCATGAAGTGGAATTTTTGCCTTTTCATTTTTCATTTTGATCACATAGTTGTCGTTTCATCCTTCCTCCTTTTTCTTATTATAGAAGGTAAATATTCCAAGAAGGTCAAGTCCTTTACTTGCAGGGTTTTTATGGGGCATGGCTCACAATATGGATTGGATTTAAAGTCACTCTTCCTTTGCTTTGAGGCCATAGTGGTGTGTTCTTTGTAAGGAGGCGTCTAAGAACTAGGTCATTTGTTTTGGAGTTTTCAGTTTACTTGCTTGATTTAGGAATCTCTATTTGAGGTTTTCACTTTTCATGGTGTGTTTAGCACGCTATAGGGACTAATATCTTATGATGGAGGATGTCCTTCTTCACGCCCTTTAGGGAGACAGGTAACACTCTTTTGAGGTTTTACAAAAGACTCCAACTCGGTTTGTACCATGAATCAAAAGATTGTTATCCAAAGGATTGTGACCAAATAGAGTAAGATCGTAGCTAAAATAGATTGAGAATAATGATGATGAAGATGAAGGGAGAGAATAACACACAATGATTTTACGTGGAAAACCCCTAAACAAATTAGGGTAAAAACCACAGGCAAGGTTACAAGAATTCCACTATATAAAATAGGAGTTACAAACTTTCTTTCTTATAGAGGAATAACAAGCTCTCTTGTAAGAAGGAACTTTCACTATTTTCTCACTTTGCTCACTTTTTGGAGATTTTGTGATGGTTTGGCAACCATGAGTCCCCTTCTATTTATAGCCCAAAGAAACTCGACCATCAATCAAATCCAATAGCTCTAAATTCACCTTGAACAATGTGGAGGATCTAATGGTCACAAATTGGCCTTGGACAATTTGGAAGATGTAATAGCAAAAAATTTGTCTTGGATAAAGTGTGAGATCCAATTGCTATAAATGGACTCTAAGATAACTTCTTAAAGTATCTTGAAAACTATATAACAATCTCCCACTTGGAGATTTGATTGAAAATCAATCACACACCATTCTCTCTACTTTGCCATCTTTACGTTACTTATGTTTCTACTAGGCCATTCGGAGATCAACACCAATTGAACTTGTCAGCATTGACTGCCTTTGTCAAGTAATTTGCTAGGTTTTTTTTTTTTTATGAATTTTATGCATATTGATTGTTCCTTCCTCCACTTTCTCACAAACAAGGTGGTACCGCACTTGAATATGTTTCGACTTGAAATGGAAAGCTGAATTCCTTGCAAGGTACAAGGCCCTTTGAATGTCACAAAATAGAGAAATTTTCTCATCTTCATGGCTGAGTTCCTCCAACAGCATTTTTAACCATATCGCTTTTTTACTAGCTTGTGTAGCTGCAACATACTCTCCTTTTGTCGTTGATGTAGCCATGATTGATTCCAGTTTGGAAACCTAGCTTATAGCTCCGCTAGCAAGAGTGAATACATATTCGGTGGTGAATTTGCTTTATCAAGATCACCTGCATAATTTGAGTCATCATATCCTCTAACAGCAAAGTTTGATCCTCCATAACACAATGCAACATCAATGGACTCTCTAGTGTATCTATGGATCCTTTTAGCAACATTCCAATGCTCTCGACCAAGATTCGCCATGTACCAACTAACTATTCCCACTGCATGTGCAATGTTTGGTTTGGTACAAATCATGGCAAACATTAAACTTCGCATTACTGATGCATATTGTACTCGAGACATCTCCATCCTCTTTGCTTCACTGCTAGGGCTCATACTAGAGGATATCTTGAAATTAATAGGAATAGAAGTAGAAATTGGCTTATAATCTTGCATGTTGAAGTGTCACAAGACTTCATTTAGATAATTTTTCTGAGATGGCCAAATTTTCCTATTGTTTTTGTCTCGGTGAATATGCATCCTTAGAATCTTGTTTTATGGTCCCAAGTCCTTCATTTCAAATTCTCTAGCCAATTGAGCTTCAAGTCTTTGATATGACCTTTGTTGGGACGCGCTACCAACATGTCGTTAACATACAATAGCAAGACAATGAAGTCTTTTTCTTCAAACCTCTAGAAACATGTACAAGGATCTACATTAAGTCTGTTGTATCCAAGGCTCATGATGAAGGAATCAAGTCTCTTCTACCGACACCTTGGCGCATGTTTGAGACCGTACAGACTACAGAGATCTGTTTATTTTACAAACTAAGTTCTTCTTTCTCTTTACTTCAAAACCTTTTGGTTGAAGCATATAGATTTCTTCTTCAATAGAGTGTTCAGGGGTATGGAGAGAGACCCTGGGGAGGTTTGGTTCTTGGTGAGATTTCACGTTTTTCTTTGGGCTTCGGTTTCGAAGACTTTTTGTAATTATGCCATAAGCATCATTCTTAGTTGGAAACTCTTTCTTTAGTGGGTATTTTTGTGGGCTTGGTGTTGAGTATGCGCTTGTATTCTTTTACTTTTTCTCAATGAAAGCAGTTGTTTCTACAAAAAAAGAAGAAAATTCTTCTTTAAAATCTCCATGGAGAAATGAAGTCAAATGTAGCACACATTGCCAGAACTATTCTAACAGTAGTAAGTTGAACTACTAGGGAAAAGTTCTCATTGAAGTTGATACCTTCTCTTTGAGCATATCCCTTTACCACCAATCTTGTACAATACCGCTCATTTGGTCATCATTATTGCTCTGATACCACTTGTTATGCAAAGAATTGTGACCGAATAGAGTAAGATCATAGTTAGATAGACTGGGAATAATAATGAAGAAGAAGAAGGGAGAGAATATAACCCAATGATTTTATGTGGAAAACCCATAAACAAATTAGGGTAAAAACCGCGGACAAGGATAGAAGAATTCCACTATATAAAATAGGAGTTCCAAAATTTCTTCTTATATAGCATGCTCTTTTATAAGAAGAAACTCTCTATTTTCTCTCCCACTTTGTTCACTTGTTGGAGATTTTGGGATGGCAACCATGGGTCCCTATCTATTTATAGCCCAAAGAAACTTGGCCATCAAGCAAATCCAATGGCTCAAAATTCACGTTGAATAATGTGGAGGATCTAATGGTCACAAATTGGCCTTGGACAATGTGGAAGATCGAATGGCCAAAAATTTGTCTTGAACAAAATGTGAGACTTTACCGGCTACAAATGGACTCCAAGGAAATTTCTTGAAGTATCTTGAAAATTATCTAACAGAGATGTGATATAGTATATAGGCATGTTATAATTTCTCTCTCCTCATTTCGTTTCCTTTTTCTTTTTCTTTTGCCCCTTTCACGTTTTTTCCTTGTTTAGCTTGTTGGAGTTACAAAATTGATTGTTGGAAACGGACATGACAGTGATAGCCGTCAGTTTGAGTGGACTCCTACTTATTTTATGTCTGTATTTACAATAACTTCCTCTATGTGGGCTAAAGATGGAATACATTACAAGAGATTTCTTATAGGAGGTTCTGGGCGTGGGTCCCATTTGATTAGATGGAAGGTTGTTTCTTGGTTAGTAAAATCTAGAGGGCTGGGTATTGGGAAGTTGAGACTTCATAATGAGGCATTTCTTGCAATGGTTAAGTCAATTCCAAAACTTTGTAGACAAGGATCCTCATCATCTTAA ATGGAAAAATTCATCGCGTCTCTCTGTTCGGAATTCTTCTTCCAACTATCTCCTCGGAATTCTTCTCCGGTTTCTAGGTTTTCAGTTGTTGCTTCTTGTTCGGAATCATCTATGGCGGTTTCCTCATTCGGTGGCTCCAGATCATTTACTTTATTCATCATGCGAGGCTTCCGCTTCCAGGTATTGCCATTAGTTATGGTTTATATTGTTTACCGAGTTTTATTGGACGACCCTGCAATGGCAGGAACTTCACACACAACGGTTTTTATGGGGCATGGCTCACAATATGGATTGGATTTAAAGTCACTCTTCCTTTGCTTTGAGGCCATAGTGCTTGTTGGAGTTACAAAATTGATTGTTGGAAACGGACATGACAGTGATAGCCGTCAGTTTGAGTGGACTCCTACTTATTTTATGTCTGTATTTACAATAACTTCCTCTATGTGGGCTAAAGATGGAATACATTACAAGAGATTTCTTATAGGAGGTTCTGGGCGTGGGTCCCATTTGATTAGATGGAAGGTTGTTTCTTGGTTAGTAAAATCTAGAGGGCTGGGTATTGGGAAGTTGAGACTTCATAATGAGGCATTTCTTGCAATGGTTAAGTCAATTCCAAAACTTTGTAGACAAGGATCCTCATCATCTTAA ATGGAAAAATTCATCGCGTCTCTCTGTTCGGAATTCTTCTTCCAACTATCTCCTCGGAATTCTTCTCCGGTTTCTAGGTTTTCAGTTGTTGCTTCTTGTTCGGAATCATCTATGGCGGTTTCCTCATTCGGTGGCTCCAGATCATTTACTTTATTCATCATGCGAGGCTTCCGCTTCCAGGTATTGCCATTAGTTATGGTTTATATTGTTTACCGAGTTTTATTGGACGACCCTGCAATGGCAGGAACTTCACACACAACGGTTTTTATGGGGCATGGCTCACAATATGGATTGGATTTAAAGTCACTCTTCCTTTGCTTTGAGGCCATAGTGCTTGTTGGAGTTACAAAATTGATTGTTGGAAACGGACATGACAGTGATAGCCGTCAGTTTGAGTGGACTCCTACTTATTTTATGTCTGTATTTACAATAACTTCCTCTATGTGGGCTAAAGATGGAATACATTACAAGAGATTTCTTATAGGAGGTTCTGGGCGTGGGTCCCATTTGATTAGATGGAAGGTTGTTTCTTGGTTAGTAAAATCTAGAGGGCTGGGTATTGGGAAGTTGAGACTTCATAATGAGGCATTTCTTGCAATGGTTAAGTCAATTCCAAAACTTTGTAGACAAGGATCCTCATCATCTTAA MEKFIASLCSEFFFQLSPRNSSPVSRFSVVASCSESSMAVSSFGGSRSFTLFIMRGFRFQVLPLVMVYIVYRVLLDDPAMAGTSHTTVFMGHGSQYGLDLKSLFLCFEAIVLVGVTKLIVGNGHDSDSRQFEWTPTYFMSVFTITSSMWAKDGIHYKRFLIGGSGRGSHLIRWKVVSWLVKSRGLGIGKLRLHNEAFLAMVKSIPKLCRQGSSSS Homology
BLAST of CaUC10G187720 vs. NCBI nr
Match: RVX06522.1 (Protein SWEETIE [Vitis vinifera]) HSP 1 Score: 58.2 bits (139), Expect = 1.0e-04 Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of CaUC10G187720 vs. NCBI nr
Match: KAF5795212.1 (putative RNA-directed DNA polymerase [Helianthus annuus]) HSP 1 Score: 57.8 bits (138), Expect = 1.4e-04 Identity = 31/70 (44.29%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of CaUC10G187720 vs. NCBI nr
Match: RVW94050.1 (putative ribonuclease H protein [Vitis vinifera]) HSP 1 Score: 56.6 bits (135), Expect = 3.0e-04 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of CaUC10G187720 vs. NCBI nr
Match: RVW39368.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]) HSP 1 Score: 56.2 bits (134), Expect = 4.0e-04 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of CaUC10G187720 vs. NCBI nr
Match: RVW96808.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]) HSP 1 Score: 55.1 bits (131), Expect = 8.8e-04 Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of CaUC10G187720 vs. ExPASy TrEMBL
Match: A0A438JC43 (Protein SWEETIE OS=Vitis vinifera OX=29760 GN=SWEETIE_1 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 5.1e-05 Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of CaUC10G187720 vs. ExPASy TrEMBL
Match: A0A2N9JB21 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61523 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 5.6e-04 Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of CaUC10G187720 vs. ExPASy TrEMBL
Match: A0A2N9EW14 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6631 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 7.3e-04 Identity = 34/90 (37.78%), Postives = 46/90 (51.11%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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