CaUC10G187540 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAGACAAAAAATCCAGATAAAGAAAATAGACAACATAGCAGCAAGGCAAGTGACATTTTCAAAGAGGAGAAGAGGACTATTCAAAAAAGCTCATGAACTTGCAACTCTCTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGAAAGCTTTTTGATTATTCCAGCTCAAGGTAATTTTTCTTTCTCTAATTATTATTATTATTTTGTAAATTTATATAAATATATGCATATATTTCGGTTTTGAGAGAGGAGCTAAGGTTTAGAAAAAAGGAAGATGAAATGAATTGGAAGAATAAGTAATTTGATATAAAGATTGGGTTTTTTTAGATTATTAGAAATTAATTAGAAATGGTGCAAGATATAGGAATTTCCATATAAAGATTTATTTTTAATTTGTATTTTTTAAGAGCCCCATGAGGAATTTATGTGTAGATTTATGATTTATGATTGTATTTCTCATCCATTTCTCTTTCTCTCTCTGAAAGAATGGTTTTTTTTTTTTTTTTTTCTCCCTCTGAAGATGTAATTTTTATGATCTGAATTTAATTTCAATCTCACACTTGATTTCTTTATGTTCTATAAAACTTCTTCCCAACTGTGGATTTGTCTTTCTCTTTTATTTATTACTAATTCTTTGTAATTTATATGAGAAATTTTATTGGTATTTTGAAATTCCAAAATGTCCTTTGAAATGACTTGCTAACCTATTATGACATCATAGGTACGACATTAATATCATAAATATTATCCATAAAATATCAAAATTGTTGCAACACAAAAATCTCTCCCTCTCATAATGTTTGATTTTCTTTCCCTGTAATTATGTGATATTGTCTGTACTTGAATTTTGTAAAATGTCTAAAGTTTCAATGTCAAAGATTTAAAAGATAATTAAAAAATGTTGGAGTCTTTCTACAAATTTTGATACAACCATATTTATGGAAATATGAACATATTAATTACTTATTTTATTGTCACTGTTTAATATTTGTTGGCTAAAAAGTAGGTTTCAATATGTCTCTGGATTTTTCTTTTTTCTTTTTTTTTTTTTTCTATTTTTTTCAAAAGTTCACTTTGAAATTATTAAAAAAAAGAACTACATAGAGTTTTTATTGAAATAAATGATGGAACTGATATAATATTATTTACCACTATTTTGAAGCTATTATTGTTGTTATCAATTATTTTATTTTAAAAGAAATCGTTAAAATTATTTACATGATCAAATTTTGTATATCCACCCTCATTATGTTGCGAAGTAATTGAAATTCATTAAATCAAAGCTAGCAAACAAATAGATCTCTTCAAAAGTCTAGAGATATAATAGTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAACTGTCTGCAAATTAAAAAAATTCTGGGTGGAAAGTTACCCAAAAAACAAAAATTAAAAGATGTTGTGTATAATTTTAACCAAATTTATAGTTTGTGCAAAAATTTCCCTTGTTCCAAGTAGGAAAAAACACTTTTGCAGTGGTTCTCGTTTACATTTATTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTGAACAATATATATTATATTTACCATTCATTAATTAACATTATATTTTATATACTTCACAGACCCCAATAGATTGTACGGACAACATACTTGCAAAAAACATTTCAATGCCTTGTCGGATTTTGAACATTTAGATTTTCTTTTTTTTTTTTGTTAAAAAAATATATATTATAAAAATCCTCTTGTAGTGTAACTTGTTTAATTACATTAATTAATGTTCTTTGAACATAAACGATTTGGTCTAGTAGGAGGATATTAATACTTACAAACTACAAATTTCTCGGACTTCAAATATTGTATTATAGGATAGGGGATGGTCTTATAATTAATGAAAGAAAATACATATACTAAATATGGATCATATTATAATTATATGGGGCGAAACTTTGGTTTTGTTTGTAATAAACCTCATGCGTTGCGCTATAAAATTGTTGTATTTTTATTTTATGATTATTGTGATAAAATAATTGTGAGTGTCTTAAAATATAGTTTTTTTTTTTTTTTTTTTAATTTAAAGATTTAGGTCTCTCATTTGATACCTATCATTGCTTCTTTAGGTTTGAACTCACAATATTATGAAGTTAAAGAAGAAGTATGATGTTTAAACCAAATACAAAAATATTGAAAACGAGTACTTGGAGTCTTAATCATTCAAGTAAAACAAGATTCTATTAGAAAAAATGAAAGAATACGAGGACAATATGAATTATTCACAAGGGAGAGAGCTTAATTCTCAATTATAGGATTTATTTAAAGAGACAAATATATTCTTTTTATTGCATGAAGCATGCTGGAGTTATTGAGAAGACATAATATGCTACCAGAGTTGAGTAACTTTAGTCAACCTCCATCTCAGGTGAGATCCATTCATTCACTGTTAATTATATAAAGTGAGTTTAGTTCAACCGACCTAATGTATATATTAACAATCAAGAAGTATGAGATTTGATTCACTAGATTTATTTATGAGTTTTGTTTGAAATAATGACTTTCCAATAGTAGTTTTTAAGCATTGATAAAAAGTCACATTCCAAGACATGTATACCTAGAATAGGAATTTTCTTTTCTTCTAGGGAAGTCCAATTTAAGGTAGAAGGTTTAGTTTTCTGTCTCTAAAGATTATCTCTTATTCTAAGTAGCATGAATTTTCTTAATGTTTGAAAAGATGTTCTATTTGATTTCTCAAAGTTGTAGTCATAACATTCCAATTAGGTTTTTTGTCCCCCTTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTCAATTTTTGCCTTCAACAATAATATTTCTAACATATTTGTTTCCAATAATTTATTGTTGTTTTTAAGATGCCTTTTTTTAAACAAATAGCACAAAAGCACACAACAATTACAATGTTGTGTGAACGTAAGCATAACTTAACTAGTTAAAGTACGATACTCGACCAAATAATTAAAAGTTCAAATCTCTACTACACTTATTATACTAAAGAAAATAATTGCAATGTGGTTATAATGATACGAAACATGCCAACATTCGTAATGTTTTCTATAATCACTCTCCTTGTTTGTAAGACACTGTTTGTAGGAGTTCAATATTATGTGGAATTAATTAATAGAGATTCAAAACTTCAACTTTTTGGTAGAGAATATATGTCTTAAATAAGTTGAGATATGCTTTAAGTACTTAGTGTTGTTGCTTTGTGTAACCATTTAGGGTTCACAATTGGAAAAGAGTGCCCATGCTAAATTGACTGAGGAATTTGCAGCCAAGACCAAAGAACTTAGGTAAAATTACTCACAATTATAAACAGCTAAAATCATATACAAATATAGGCAACACTATATGGATTGCAGCATTTTTTTTTTTATATATAGATATATTTGTGTGTTTGCAAATAATATCTTTTTGTTGGTTAACATTAGTACGTCAAATTTGCTCACAAGTATAGTATAATATTCTATAGTATGTAAATGAGGATCAAAATTAAGTATCAACTTAGTTGAGATAGTCTGGTATACTTACTGACCCATATTGTATCTTTTTCTAAAAATAGATCGAAATTAAGTAATAGATATCTTATTTACTAAACTCTATACTAAATGAAATAGTGAAATTGAATTGCCTAGGCCTCACTTAGTAACTATTTGATGTTTTTGAAAATTAAGTCCCATAAATACCCCTTCCACCTTTATGTTTCTTGCTTTCTTATCTACTTTCTACAATTCTACCAATATCTTCAAAAACCAAAAATCAAAATTTGAAAACTAAAATAAGTAGTTTTTAAGAACTTATTTTTCTTCTTGAAATTTGGCTGATAATTCAACTCTTGTACTTAATAGAGATGAAAACATGGTAAGAACTTGAGAGAAAATAAATTTAATTTTCAAAAACCAAATAGTTATCAAATGGGGCTTTAATTTTAAGGTTTTCTTCCCGAGTATTTAAGTTTGGTTTGAATTTACATTTTGTGTAGGGGGTGATCCATTTTTGTTGTACATTTCAGTATTTTACTTTGCCTAAAATATAAAGACCAATAAAAGTAACCAAAAATAAACTTTGATATACAAATACTTATATTTTTGTTGAACCAAAAGTTTTGAAAATTGCCAAAGTGAGCTTAAGTCGAAGGTTTAATCTCTATTTCCATCTCCATAGTTGTTAATTATACTAAAAACGTTGGAAATGAATCCGGAAAAAACAATACTTATTATTTAATTTGTGCTAAACTGTGAACAAGGCATATGAAGGGAGAGGAGCTTCAAGGGCTTGGAATAGAAGAATTAAAGAAATTGGAGAAATTGCTTGAGATTGGTTTGAATCGTGTAGTAGAGACCAAGGTTTGTTCATATAACAAATTATTAAGACACTTTTAATTTGTAATTAAGCTTATGATTATCAAATTATTGTGTCCTTGAAATGTCCTAATTTGGAGATTTTGTGTGTTTTTCTTGCAGGATGAAAAGTTTCTTAAAGAGATTGGTGCTGTGAAGGAGAAGGTCATAAGCCTCTTCTTATTTCAACATATTCTCTTAAAATTCTTATATTCTTTTGACAGATTATTATACTTATAGGTTTACTTGCTAGATGTGTTCTTTCTTCTACTTGTAGGTTTACTTGCTTTGATATCTACTAGCTTTACTAATATTTTAAACTAATTTTTGAAAACAAAACACGTAAGCTCCATTTGATAACTATTTGATTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTAAAATTAAGTCTATATATCAACACTGCTGGCACCTATTGATTTCTTTGTTTTGCTGTCTTAATTTTTGGAGTGTTTTTGAAATTCAAGCTAAGTTTTAAGAACTAAAAAAAAAAAAGTAACTTTTTAACAACTTGTTTTTGTTTTTAGAATTTGGTCAAGAATTCAATTGTTTACTTAGAAAAGATGATTAAGCAATTATGAGAACATGACCAATGACCAAAACCCAAAAAAAAAAAAAAAATGAAAATTTTAGTAAAGAACTGTCAAAGAACAAACTTAATGATTTTCAAAAATAAAAAACCAAATAGTCATAATATGAACTTAAACATTCTAACAATAAAATGGGTGAATGAGGTAGTTAGTAGGAATAAATAACTCCTGATTGCATGCCTCTTGTTAGAAAATTCATTTATAAAATGAAACTATATTTAACCTACCACCTAAACAAAACCTTAGTCTCTCCAAAAAGGAGAAAAAAAAAAATCAAATAATTAAGGTGATACTTCAACTTAAGTAGGAAATTAGTATTATAGCTTTCAAATGAATCCTCTAAATTAAGAAAATCTTCAAGGCATTATTTCATTTCTTCCTTTGCTAACTTGTTTTATATTTATTTATGAGATACCCAAAAAATGCAAACCCATTTCATACATTATAACATAAATATTATTGTAGGAAGCTTTGCTAATGGAAGAGAATCAGAGACTGAGGAATAAAGTGAGAGCTTTCTTCTTAGCTAATTCTCTAATTCTCTTTGTAAGTGAAAATGAAAAGACAAAAACCATTGTTAATGACTAAATTAGGCTTTTGGTTTTTGTGATGTCATGAAAGATGGAAACTTTGAATAGAGATCAGCAAGAAGAACAAGCAGTGGTTGTTATTGGTGGAAATTCTTTGGGGTCAAAGTCAAACACCACCAACAGCAGCTCCTCACCAAACCCTAATTCTCAAGATTATGATGACATTTCTCTTAAATTGGGGTTAGTAGTTTTCTTACATATACACTATATATAAAATGCTTTTAAATCCATTTGTTGCTGCGTAAAACACAATATATGTTCTATTTATTTTATTATTATTATTTTTTTTCTTGTTTGAGGATGTTCTCTCCATCCGAGAATAGCATTAAGAATCTATTTGAAATGACTTTTAGGTGCTTAAAAAGGAGTATGCAAGGAGTTGTTTAG ATGACAAGACAAAAAATCCAGATAAAGAAAATAGACAACATAGCAGCAAGGCAAGTGACATTTTCAAAGAGGAGAAGAGGACTATTCAAAAAAGCTCATGAACTTGCAACTCTCTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGAAAGCTTTTTGATTATTCCAGCTCAAGCATGCTGGAGTTATTGAGAAGACATAATATGCTACCAGAGTTGAGTAACTTTAGTCAACCTCCATCTCAGTTGGAAAAGAGTGCCCATGCTAAATTGACTGAGGAATTTGCAGCCAAGACCAAAGAACTTAGGCATATGAAGGGAGAGGAGCTTCAAGGGCTTGGAATAGAAGAATTAAAGAAATTGGAGAAATTGCTTGAGATTGGTTTGAATCGTGTAGTAGAGACCAAGGATGAAAAGTTTCTTAAAGAGATTGGTGCTGTGAAGGAGAAGGAAGCTTTGCTAATGGAAGAGAATCAGAGACTGAGGAATAAAGTGAGAGCTTTCTTCTTAGCTAATTCTCTAATTCTCTTTATGGAAACTTTGAATAGAGATCAGCAAGAAGAACAAGCAGTGGTTGTTATTGGTGGAAATTCTTTGGGGTCAAAGTCAAACACCACCAACAGCAGCTCCTCACCAAACCCTAATTCTCAAGATTATGATGACATTTCTCTTAAATTGGGGATGTTCTCTCCATCCGAGAATAGCATTAAGAATCTATTTGAAATGACTTTTAGGTGCTTAAAAAGGAGTATGCAAGGAGTTGTTTAG ATGACAAGACAAAAAATCCAGATAAAGAAAATAGACAACATAGCAGCAAGGCAAGTGACATTTTCAAAGAGGAGAAGAGGACTATTCAAAAAAGCTCATGAACTTGCAACTCTCTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGAAAGCTTTTTGATTATTCCAGCTCAAGCATGCTGGAGTTATTGAGAAGACATAATATGCTACCAGAGTTGAGTAACTTTAGTCAACCTCCATCTCAGTTGGAAAAGAGTGCCCATGCTAAATTGACTGAGGAATTTGCAGCCAAGACCAAAGAACTTAGGCATATGAAGGGAGAGGAGCTTCAAGGGCTTGGAATAGAAGAATTAAAGAAATTGGAGAAATTGCTTGAGATTGGTTTGAATCGTGTAGTAGAGACCAAGGATGAAAAGTTTCTTAAAGAGATTGGTGCTGTGAAGGAGAAGGAAGCTTTGCTAATGGAAGAGAATCAGAGACTGAGGAATAAAGTGAGAGCTTTCTTCTTAGCTAATTCTCTAATTCTCTTTATGGAAACTTTGAATAGAGATCAGCAAGAAGAACAAGCAGTGGTTGTTATTGGTGGAAATTCTTTGGGGTCAAAGTCAAACACCACCAACAGCAGCTCCTCACCAAACCCTAATTCTCAAGATTATGATGACATTTCTCTTAAATTGGGGATGTTCTCTCCATCCGAGAATAGCATTAAGAATCTATTTGAAATGACTTTTAGGTGCTTAAAAAGGAGTATGCAAGGAGTTGTTTAG MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSSSMLELLRRHNMLPELSNFSQPPSQLEKSAHAKLTEEFAAKTKELRHMKGEELQGLGIEELKKLEKLLEIGLNRVVETKDEKFLKEIGAVKEKEALLMEENQRLRNKVRAFFLANSLILFMETLNRDQQEEQAVVVIGGNSLGSKSNTTNSSSSPNPNSQDYDDISLKLGMFSPSENSIKNLFEMTFRCLKRSMQGVV Homology
BLAST of CaUC10G187540 vs. NCBI nr
Match: XP_038905492.1 (MADS-box protein SVP-like isoform X1 [Benincasa hispida]) HSP 1 Score: 374.0 bits (959), Expect = 1.0e-99 Identity = 204/230 (88.70%), Postives = 213/230 (92.61%), Query Frame = 0
BLAST of CaUC10G187540 vs. NCBI nr
Match: XP_008454463.1 (PREDICTED: MADS-box protein JOINTLESS-like isoform X1 [Cucumis melo]) HSP 1 Score: 345.5 bits (885), Expect = 3.9e-91 Identity = 198/235 (84.26%), Postives = 212/235 (90.21%), Query Frame = 0
BLAST of CaUC10G187540 vs. NCBI nr
Match: XP_011653451.1 (MADS-box protein JOINTLESS [Cucumis sativus]) HSP 1 Score: 343.6 bits (880), Expect = 1.5e-90 Identity = 196/235 (83.40%), Postives = 211/235 (89.79%), Query Frame = 0
BLAST of CaUC10G187540 vs. NCBI nr
Match: XP_038905494.1 (MADS-box protein SVP-like isoform X2 [Benincasa hispida]) HSP 1 Score: 342.4 bits (877), Expect = 3.3e-90 Identity = 190/230 (82.61%), Postives = 199/230 (86.52%), Query Frame = 0
BLAST of CaUC10G187540 vs. NCBI nr
Match: XP_022984239.1 (MADS-box protein SVP-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 330.5 bits (846), Expect = 1.3e-86 Identity = 190/230 (82.61%), Postives = 201/230 (87.39%), Query Frame = 0
BLAST of CaUC10G187540 vs. ExPASy Swiss-Prot
Match: Q9FVC1 (MADS-box protein SVP OS=Arabidopsis thaliana OX=3702 GN=SVP PE=1 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.4e-46 Identity = 119/239 (49.79%), Postives = 157/239 (65.69%), Query Frame = 0
BLAST of CaUC10G187540 vs. ExPASy Swiss-Prot
Match: Q9FUY6 (MADS-box protein JOINTLESS OS=Solanum lycopersicum OX=4081 GN=J PE=1 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 2.0e-45 Identity = 115/244 (47.13%), Postives = 154/244 (63.11%), Query Frame = 0
BLAST of CaUC10G187540 vs. ExPASy Swiss-Prot
Match: Q9XJ66 (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS22 PE=2 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 3.9e-41 Identity = 103/233 (44.21%), Postives = 153/233 (65.67%), Query Frame = 0
BLAST of CaUC10G187540 vs. ExPASy Swiss-Prot
Match: O82794 (MADS-box protein AGL24 OS=Arabidopsis thaliana OX=3702 GN=AGL24 PE=1 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.1e-40 Identity = 110/235 (46.81%), Postives = 160/235 (68.09%), Query Frame = 0
BLAST of CaUC10G187540 vs. ExPASy Swiss-Prot
Match: Q5K4R0 (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS47 PE=1 SV=3) HSP 1 Score: 152.5 bits (384), Expect = 6.4e-36 Identity = 103/233 (44.21%), Postives = 149/233 (63.95%), Query Frame = 0
BLAST of CaUC10G187540 vs. ExPASy TrEMBL
Match: A0A1S3BYS5 (MADS-box protein JOINTLESS-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494862 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.9e-91 Identity = 198/235 (84.26%), Postives = 212/235 (90.21%), Query Frame = 0
BLAST of CaUC10G187540 vs. ExPASy TrEMBL
Match: A0A6J1J9W9 (MADS-box protein SVP-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482611 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 6.3e-87 Identity = 190/230 (82.61%), Postives = 201/230 (87.39%), Query Frame = 0
BLAST of CaUC10G187540 vs. ExPASy TrEMBL
Match: A0A6J1EDZ0 (MADS-box protein SVP-like OS=Cucurbita moschata OX=3662 GN=LOC111432358 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 3.1e-86 Identity = 184/231 (79.65%), Postives = 203/231 (87.88%), Query Frame = 0
BLAST of CaUC10G187540 vs. ExPASy TrEMBL
Match: A0A6J1J9Z1 (MADS-box protein SVP-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482611 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 9.1e-86 Identity = 190/231 (82.25%), Postives = 201/231 (87.01%), Query Frame = 0
BLAST of CaUC10G187540 vs. ExPASy TrEMBL
Match: A0A6J1E6W1 (MADS-box protein SVP-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430497 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 5.9e-85 Identity = 186/230 (80.87%), Postives = 200/230 (86.96%), Query Frame = 0
BLAST of CaUC10G187540 vs. TAIR 10
Match: AT2G22540.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 188.0 bits (476), Expect = 9.7e-48 Identity = 119/239 (49.79%), Postives = 157/239 (65.69%), Query Frame = 0
BLAST of CaUC10G187540 vs. TAIR 10
Match: AT2G22540.2 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 177.9 bits (450), Expect = 1.0e-44 Identity = 117/239 (48.95%), Postives = 153/239 (64.02%), Query Frame = 0
BLAST of CaUC10G187540 vs. TAIR 10
Match: AT4G24540.1 (AGAMOUS-like 24 ) HSP 1 Score: 168.3 bits (425), Expect = 8.0e-42 Identity = 110/235 (46.81%), Postives = 160/235 (68.09%), Query Frame = 0
BLAST of CaUC10G187540 vs. TAIR 10
Match: AT3G57230.2 (AGAMOUS-like 16 ) HSP 1 Score: 119.4 bits (298), Expect = 4.3e-27 Identity = 85/205 (41.46%), Postives = 123/205 (60.00%), Query Frame = 0
BLAST of CaUC10G187540 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 ) HSP 1 Score: 118.2 bits (295), Expect = 9.5e-27 Identity = 82/204 (40.20%), Postives = 119/204 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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