CaUC10G187510 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTCCAAGTTCTTGATCATTGCCTTCATGGCTACTTTGGCTCTTTCCAGCATCCACTTCGGCCAAGCTGCTCGCCATCTTTTGCAAACCACTCCCCCCTTGGTGCCAAACCTTCCGGTGATCCCAACCGGGATACCGCCATTGCCCGCCTTGCCAAACCCTACTACTCTTCCGAATTTACCACAACCCACATTGCCTAAACTTAACCTCCCTCCGCTTCCGAGCTCTCCGGTGAACATCCCGAGCGGGCTAGCGTTGCCACCGCTACCAACAATGGCACTTCCGAACTTTCCGTCAATCCCTACCATTCCAACATCATTTCCTTCCATCCCATTTTTATCTCCTCCTCCTGCAACTTCTTCTTCCCCCTAA ATGGCTTCTTCCAAGTTCTTGATCATTGCCTTCATGGCTACTTTGGCTCTTTCCAGCATCCACTTCGGCCAAGCTGCTCGCCATCTTTTGCAAACCACTCCCCCCTTGGTGCCAAACCTTCCGGTGATCCCAACCGGGATACCGCCATTGCCCGCCTTGCCAAACCCTACTACTCTTCCGAATTTACCACAACCCACATTGCCTAAACTTAACCTCCCTCCGCTTCCGAGCTCTCCGGTGAACATCCCGAGCGGGCTAGCGTTGCCACCGCTACCAACAATGGCACTTCCGAACTTTCCGTCAATCCCTACCATTCCAACATCATTTCCTTCCATCCCATTTTTATCTCCTCCTCCTGCAACTTCTTCTTCCCCCTAA ATGGCTTCTTCCAAGTTCTTGATCATTGCCTTCATGGCTACTTTGGCTCTTTCCAGCATCCACTTCGGCCAAGCTGCTCGCCATCTTTTGCAAACCACTCCCCCCTTGGTGCCAAACCTTCCGGTGATCCCAACCGGGATACCGCCATTGCCCGCCTTGCCAAACCCTACTACTCTTCCGAATTTACCACAACCCACATTGCCTAAACTTAACCTCCCTCCGCTTCCGAGCTCTCCGGTGAACATCCCGAGCGGGCTAGCGTTGCCACCGCTACCAACAATGGCACTTCCGAACTTTCCGTCAATCCCTACCATTCCAACATCATTTCCTTCCATCCCATTTTTATCTCCTCCTCCTGCAACTTCTTCTTCCCCCTAA MASSKFLIIAFMATLALSSIHFGQAARHLLQTTPPLVPNLPVIPTGIPPLPALPNPTTLPNLPQPTLPKLNLPPLPSSPVNIPSGLALPPLPTMALPNFPSIPTIPTSFPSIPFLSPPPATSSSP Homology
BLAST of CaUC10G187510 vs. NCBI nr
Match: KAA0056641.1 (proline-rich receptor-like protein kinase PERK2 [Cucumis melo var. makuwa] >TYK07567.1 proline-rich receptor-like protein kinase PERK2 [Cucumis melo var. makuwa]) HSP 1 Score: 208.0 bits (528), Expect = 4.7e-50 Identity = 118/125 (94.40%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of CaUC10G187510 vs. NCBI nr
Match: XP_038904303.1 (protein PELPK1-like [Benincasa hispida]) HSP 1 Score: 197.2 bits (500), Expect = 8.4e-47 Identity = 112/125 (89.60%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of CaUC10G187510 vs. NCBI nr
Match: XP_008462893.1 (PREDICTED: proline-rich receptor-like protein kinase PERK2 [Cucumis melo] >TYK07568.1 proline-rich receptor-like protein kinase PERK2 [Cucumis melo var. makuwa]) HSP 1 Score: 193.7 bits (491), Expect = 9.3e-46 Identity = 111/125 (88.80%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of CaUC10G187510 vs. NCBI nr
Match: KAA0056642.1 (proline-rich receptor-like protein kinase PERK2 [Cucumis melo var. makuwa]) HSP 1 Score: 192.6 bits (488), Expect = 2.1e-45 Identity = 110/125 (88.00%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of CaUC10G187510 vs. NCBI nr
Match: KAG6577257.1 (hypothetical protein SDJN03_24831, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015347.1 hypothetical protein SDJN02_22982, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 178.7 bits (452), Expect = 3.1e-41 Identity = 105/125 (84.00%), Postives = 108/125 (86.40%), Query Frame = 0
BLAST of CaUC10G187510 vs. ExPASy TrEMBL
Match: A0A5D3C6P2 (Proline-rich receptor-like protein kinase PERK2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00400 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.3e-50 Identity = 118/125 (94.40%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of CaUC10G187510 vs. ExPASy TrEMBL
Match: A0A5D3C8R8 (Proline-rich receptor-like protein kinase PERK2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00410 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 4.5e-46 Identity = 111/125 (88.80%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of CaUC10G187510 vs. ExPASy TrEMBL
Match: A0A1S3CJJ1 (proline-rich receptor-like protein kinase PERK2 OS=Cucumis melo OX=3656 GN=LOC103501166 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 4.5e-46 Identity = 111/125 (88.80%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of CaUC10G187510 vs. ExPASy TrEMBL
Match: A0A5A7ULD9 (Proline-rich receptor-like protein kinase PERK2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001670 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.0e-45 Identity = 110/125 (88.00%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of CaUC10G187510 vs. ExPASy TrEMBL
Match: A0A0A0L1Y3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374890 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38 Identity = 100/125 (80.00%), Postives = 104/125 (83.20%), Query Frame = 0
BLAST of CaUC10G187510 vs. TAIR 10
Match: AT2G22510.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08 Identity = 51/128 (39.84%), Postives = 69/128 (53.91%), Query Frame = 0
BLAST of CaUC10G187510 vs. TAIR 10
Match: AT4G38080.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07 Identity = 55/128 (42.97%), Postives = 73/128 (57.03%), Query Frame = 0
BLAST of CaUC10G187510 vs. TAIR 10
Match: AT5G09530.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 42.7 bits (99), Expect = 2.5e-04 Identity = 46/125 (36.80%), Postives = 59/125 (47.20%), Query Frame = 0
BLAST of CaUC10G187510 vs. TAIR 10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 42.7 bits (99), Expect = 2.5e-04 Identity = 43/96 (44.79%), Postives = 55/96 (57.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|