CaUC10G187420 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGCCACGGTTAATCAATTAGCCTCTCAAAGTCTCCTCTTTGGCCATATTTCCTTCTCTTCTTCTTTAATAATGGCAGCTCGTCCCTCCGCCGTTCTGAGCGTCGTGCTGGTGGCGCTGTTGCTCGTTTGTGTGGCTAATGCACACGAGGGCCACGTGCATCCTCCGTCCTCCGAGCCTCATGCCGCTCCTCCGCCCGGACAGAACGCCGCCGTCATGAACAGCCTTTCATACTTTTGGTCTATGGCTATGGCCATGGTGGCTACGTCTTGGATGTTGTGTTAA ATGCGCCACGCTCGTCCCTCCGCCGTTCTGAGCGTCGTGCTGGTGGCGCTGTTGCTCGTTTGTGTGGCTAATGCACACGAGGGCCACGTGCATCCTCCGTCCTCCGAGCCTCATGCCGCTCCTCCGCCCGGACAGAACGCCGCCGTCATGAACAGCCTTTCATACTTTTGGTCTATGGCTATGGCCATGGTGGCTACGTCTTGGATGTTGTGTTAA ATGCGCCACGCTCGTCCCTCCGCCGTTCTGAGCGTCGTGCTGGTGGCGCTGTTGCTCGTTTGTGTGGCTAATGCACACGAGGGCCACGTGCATCCTCCGTCCTCCGAGCCTCATGCCGCTCCTCCGCCCGGACAGAACGCCGCCGTCATGAACAGCCTTTCATACTTTTGGTCTATGGCTATGGCCATGGTGGCTACGTCTTGGATGTTGTGTTAA MRHARPSAVLSVVLVALLLVCVANAHEGHVHPPSSEPHAAPPPGQNAAVMNSLSYFWSMAMAMVATSWMLC Homology
BLAST of CaUC10G187420 vs. NCBI nr
Match: KGN53725.1 (hypothetical protein Csa_014716 [Cucumis sativus]) HSP 1 Score: 109.4 bits (272), Expect = 1.3e-20 Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of CaUC10G187420 vs. NCBI nr
Match: KAG7030901.1 (Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 107.5 bits (267), Expect = 5.0e-20 Identity = 55/67 (82.09%), Postives = 57/67 (85.07%), Query Frame = 0
BLAST of CaUC10G187420 vs. NCBI nr
Match: KAG6576850.1 (hypothetical protein SDJN03_24424, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19 Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 0
BLAST of CaUC10G187420 vs. NCBI nr
Match: TYK29918.1 (hypothetical protein E5676_scaffold652G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 103.6 bits (257), Expect = 7.2e-19 Identity = 52/64 (81.25%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of CaUC10G187420 vs. NCBI nr
Match: KAA0061157.1 (hypothetical protein E6C27_scaffold753G00260 [Cucumis melo var. makuwa]) HSP 1 Score: 102.1 bits (253), Expect = 2.1e-18 Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of CaUC10G187420 vs. ExPASy TrEMBL
Match: A0A0A0KVS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G111600 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 6.3e-21 Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of CaUC10G187420 vs. ExPASy TrEMBL
Match: A0A5D3E2A2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00020 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.5e-19 Identity = 52/64 (81.25%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of CaUC10G187420 vs. ExPASy TrEMBL
Match: A0A5A7V2Q5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00260 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.0e-18 Identity = 51/64 (79.69%), Postives = 55/64 (85.94%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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