CaUC10G185220 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G185220
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	cytochrome c-type biogenesis ccda-like chloroplastic protein
Location	Ciama_Chr10: 8358048 .. 8363705 (+)
RNA-Seq Expression	CaUC10G185220
Synteny	CaUC10G185220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGCCAGAATCACTCTCTAACTTTCGTTACTTTCTTCTTCTTCGTGTTTGTGGGCAGAAGAAATCTTTGGCAACTACCAACTTCTCCACTACCTCTGCTCTCTATTCCAGATGAGTCTCCTTATGAGCCATTCTGGTGGTTTCCGCATCAATTCCATCAAAATTTCAACCTCTAAACGTTTACAACTGCCCAACACGCCAGGTAATAATACCTTTCATTTGGTTCTATATCAAAGTCAATGACTGAAACACCACTTCAAGATGTAGACGAACTTTCGGTTGATTCCCACATCGTAATGAAGTATTGGGTATTGAATGGTTTATCTAGGGAGAACGTTTAGGGTACATTTTGTGAGATTAACTGTGGGGGGATGTTTTGATCATGATGTATTCAACTGTCTCATAGAGGGTCACTGGTTTCTTTAGGTAAATATGTCGTGCCTATGAAATTTCTTGGGAGAAAATCCGAAGCTGATGATCAAAATAAAGATGTTGAGTTGGTGGAGATTAAAAACAGCAGCAATTATTTTCAAGCCATGGCTTTTGTAAATGCCATTTCTGGTAATGCTTGTGCACTCTGCCTCAGGTGGAAGATTGTTCTACTTCAATCTTGTTTTAATCATTTATCTATGTTCTGTTTCAATTGATAGTTTGTTCATTAGATGACTATGCTTGGTTATTTCATAAGTAGCCATAAGCAATCTGGTATATGGTATCATAGGCAACCTCTTACTCTCAAATCCTATGTTTTCACTCCTAGTAAAATAAAATACATCTTGGGCTTTATCCCTGCTGTGGTTTAGTATGAATGAATATTCTTAATTTTATTTCACTTTCAATATTCCAGCGACAAGTTTCCTTGCAGTAGATGCCGCGAAGGCTGAAACTTTAAAGCATATGTGGGTAAGAGTTTATAGTCCTCGTTTATTTTGTTTTCTAAAGCGACCTGAATCTATATCATTTTCAGACTTCAATTCCCTAAAATCCATTTATTTCATTACTTTTTAAGATTTTGAATATCATTTTTCACCAATTCCTTGAGAATCTTGATGAAATCTTGATGTATTTCTATTTCCCCTTGGACATAGTCGTGAGATGTTTCTTTATTTGGTGAGTTTCAATTGTTTGTGCTTTTATGATGGCAAAGATTTTGATTGTTTATTTATTTTACTATTTTTTGGGGTGAGGGTATGGGCGTGCCAGATAAGAATGGTTAATTCATCATGACTTCAACAGAAACCCGAAGCTTGGTAACAGGGCTGCTCTTTAGCATTTCTTAGGTTGCTTGCTTAAGATGTTGGTCTCTATCAATTGAATATCATGGTAACTAAATTAGTCTGCGTACATATTTTGCTTGGTGTATAACTGTACATTATATCAGGAACTAGAATTATTTTCCTTCAAGTCAGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCAGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTGTCTGCTCTTAGTTTTACAAGGTCCAATCTTGTTTTTCTGCACTTTGCTTTTCATGTCTTTTAATGCCTTGAATTTGATAGTAAACGGCTCTTTATTATTTATCTGCCCTTGACTACTTATTCCTTTATACAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGTCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATAGGTAAGCATTTCATACACACGTTTTTGCAATCTCGGTATGTTATTTTCGGTCTTATGTTGATGTGGTGATCCAACAAAACTTTGTAGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTGAATTACTTTCTAAGCAAGTTCCAACTTTCTCCTCTTGCTCTGTGTGATCGTAGTATCAAATTATAGAAATCTTTTAATCATGTGAGCTCAACATTCAAGATCCTAGGCTCCGCCCTTTAGATGGAAACTTGGAAAGTTTAGGCCTGGTTTGATAACCATTTTTTTTTTTTTTTTTTTTTAATTTTTAGTTTTTGAAAATTGAACTTGTAAACTCTATTTCCACCCATTGTTCGGTTCTCTACTTTCTACAAATATTTTCAATAGCAAGTCAAGTTTTTAAAAATAGAATAAAGTAGTTTTCAAAAACTAGTTATTTTTTTTAGAGTTTGACTTGGAATTCAATTATTTCTTTAACAAAAGTTAACCATAATCGGAAAATTGAGAGAAACGAGCATAAATTTTAAAAACAGATAACTAAAAACCAAATCACTGAATCATTATCAAACAGAGCCTTGATAATTTATAACCCTTGTTATCTATGTGAGTTGGGCTTGGGGTAGACAAATCCTTCATGAGATTAGTGGGGTAGGCCATGAGTATGTTGTAAGAAGTAGGGGCCTTCAACACCCTGGTTATAGAAAAATAATAATAATAAACTAGAACTAGAAAGAAATTATTCAATGGTTCTGTGATGCTAGAGTCTTATTATTCGGTCCAGATTTATCATCATTGTTACTGTATCTTCTAGTTGCTTTGAACTTGAGTGCATTTCTATCGAAATATATGAATCAATGTGAGAGTAGTAAGGGATATCTTGGTTGTAGTAATAGGATATTAGTAAGGGCATAGTGGTAATTAGTTAGTGGTGCTTTGGTTAAAATAAGGAAAGTTGGGCACCTTAGGGAATCATTTTGTTTAGTCAAGACTCAATCCTAAGTGGATTTGTTGTGGGAGAGAGATGGCGCTCTCACAAGACTATTGATATTGCAATATAGTTATCTTTACTTCTTTAGTTTTTCATATTTTTTTCTGTTTGGTGTCCTAAAAGAATCCTTCTAGGCCTCTACTGTTCGGGATGAATATGCATGTTTATGTGATATAGATTTTATAGAAAGGCAGTTAATTGGAATTTGGTCTCTTCATATTTTCAGGTTGTTGGAAACTCCGTTGCTTTCTCATTAGGACTTGCTACGACCCTGGCGCTGTTAGGTATAGCAGCTTCTTTTGCTGGCAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTGGAGGTACTTATCAAAGCAGGATTAGTTGTATGGACTACCAAGTTGCAAACTTGATTATTTATTTATTTTTGCGAGCAGAAAACTTGAAATTGAAATGCTAATTTTGGGAGAAGAGTTGACGTTGGCCAATGTTTTTCCCATCTTTATCATTTAACACCTGAAATCTTTTCAACTGAAAGTTTTGCATAAATGTTCTATAATGTAATCTGTATCTTCGTAAGAACATGAACAATATGGAACTGTCCTGGAGTTACTATCGTTGATTTATTTATTTATTTTTATTTCTTTTCATTTTGATGACTAAAAAAGGCATAAGGCACAAAGATTGAAGGGTACTCTGGTATATCATTACCTATTATTCGGAATCATCTTTCTTTTGTGGAAAGAATAATTAAATTTGTCTCATTATAAATGATATTAGTTTCACTTATTTGTATTTGTTAGTGGGTTGCAGAACCAGATAACTAAGTACTCAGACTGCTTTTTCACAATTTCATTTTGGTTTAGTCTTCTGATGGATTGATTCTACAATTTGTCATGAATTGCAGATAATTGAGTTGCGACTACCCTCATTCTTCGACAATTTCGATCCCCGTTCTGCGGCTGCCAGCTTTCCATCAAGTAATTGGCCTCTCCATTTCTTTTTGTCCACTGGTTGCTTTTCTGGATGCTCTAACATGGTTTTAAATCTGATGTATTAGGTGTGCAAGCGTATCTAGCCGGGCTAACATTTGCTTTGGCTGCATCTCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCCACATCCAAGGTGCCTTAAATCGTTTCTTATGCTGATACGACTCTGATCTTAGTTTCAGTGGATTGAATCATATAAATAATTCTTTGGAAAAGAATCCTTAAAATTAAAAAAATGACCTGTCTATATGTTATCGACCAGTTGCAGGTTTTGATTTCATCTCATGGTTCTTACCATATATTTAAAATATATTCAACAAACTTGTTTGCCTCTCTCATACACATACTTCTTCTATAAAATGAATGGAAAATAGAGGATACAATATATGCTTATTGGTTGTATGATGATAGGCTACTTTTCCAAGGGCTAGGGTTGGTTAGAGCTTCCCTCTTCAATCGAGAGGCATACTTCTAAGTTAAAAATTTGATCAATCAGAGGGTATTTGGGCCACCAATTTCACCAACTTGAAGTTGGTGGAGCGTACTATGTTTGGAGCTCCAATTATAATAGTTGGTATTTTAAACTATTATAACCTACAATTAACTAGAATATTACTATTTCAAATCCCTCTTTGTTGTAGTGTTTACTATTTCTTACTCATCTTATCTTTTCCTCTTTGTTACTGTGTTTACTATTTCTTATCCAGACTAAAATAATCTGGACTCCAAATACAGATCATAATAACCACTAATTATAATGACTAAGACTAACTCAGCGTCCTAAATATCTCCTTGAAGTTCTTGTTCTCTCTTAAAGCTGGCCTTGGAGCAAGTGAAACCTCTTAAGAGAATCAATAGGGTTGATAATGTAATTGCGGTAGAAGGAAATTGTAATCCTTTCCTTAGTGTTCCCTGTTAATGACTTTTTTTTATAACAGGATCCCGTCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGCTACGTCGTGCCGTTGCTTCTGGCTGCCTCATTTGCTGGAGCATTGCAGGTAATGTGGTTATAGTAGGAAGAACTTACCTGCATATCGATATTTTGTTTGCAATGTAGTATAAGTTTATCAGGTGACTTATCAAAAGTTTGCCCCTTTGTTATTTTCGACGCTTTAGTTCATTGTAGATTGTAATCTCGTGTTTTGTTGTCTAATTGACTCTTGCATGCCTGCAGAGCCTTCTGTCGTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGGTAATTCCTTTAAACTCATCCTCACACCAATAAGATAACAGATAGATAAATATGTTCAATTTCAAAAGATTGGCCTTTGAACACAAGAAAAAAACATGAGGTTCAACTTCAAAACACAATCAATGCTATTTTCTACAAATGCATATAAAAGAAATGTTGCACCTCTTCTCAAAATTATTCTGAACTCACTGAAAACACATCCAAACAGTCAATTACATGTTAAAAGCATGTAGTTAATATAAATAAATTTACTGTCGCTGGTTAGCCTAAGTTTTTGAGTTAGATTGTTGATTGACAGTTTGAAACTCGATTTGTTTGACTTCAGAATTTTGAAATAAGATGTTTGAAATGGGATTTGTTTGTTGTTTGATGCATGCAGTGGTGCATTACTGTTGAGTGGAGGTATTTATACATTCTTGGACAGATTATTTCCAGTCACAATGGCAATGTAAAGATATAAAAAATGCTTACAAACTCCTTAGATAAATGATGAGGTTATAATGTTGCTCTCATTCAATGGCCCATATATTTCTGTGTTTCTTTTGGCTTCACTCTCTTTAATTTTATGTGGATAAGATCAACCGCCATAAATATCATAATATCATTCATTCAAGTTTCAACAATAA

mRNA sequence

CACGCCAGAATCACTCTCTAACTTTCGTTACTTTCTTCTTCTTCGTGTTTGTGGGCAGAAGAAATCTTTGGCAACTACCAACTTCTCCACTACCTCTGCTCTCTATTCCAGATGAGTCTCCTTATGAGCCATTCTGGTGGTTTCCGCATCAATTCCATCAAAATTTCAACCTCTAAACGTTTACAACTGCCCAACACGCCAGGTAAATATGTCGTGCCTATGAAATTTCTTGGGAGAAAATCCGAAGCTGATGATCAAAATAAAGATGTTGAGTTGGTGGAGATTAAAAACAGCAGCAATTATTTTCAAGCCATGGCTTTTGTAAATGCCATTTCTGGTAATGCTTGTGCACTCTGCCTCAGCCATAAGCAATCTGGTATATGGTATCATAGGCAACCTCTTACTCTCAAATCCTATGTTTTCACTCCTACGACAAGTTTCCTTGCAGTAGATGCCGCGAAGGCTGAAACTTTAAAGCATATGTGGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCAGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTGTCTGCTCTTAGTTTTACAAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGTCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATAGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTTGTTGGAAACTCCGTTGCTTTCTCATTAGGACTTGCTACGACCCTGGCGCTGTTAGGTATAGCAGCTTCTTTTGCTGGCAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTGGAGATAATTGAGTTGCGACTACCCTCATTCTTCGACAATTTCGATCCCCGTTCTGCGGCTGCCAGCTTTCCATCAAGTGTGCAAGCGTATCTAGCCGGGCTAACATTTGCTTTGGCTGCATCTCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCCACATCCAAGGATCCCGTCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGCTACGTCGTGCCGTTGCTTCTGGCTGCCTCATTTGCTGGAGCATTGCAGAGCCTTCTGTCGTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGTGCATTACTGTTGAGTGGAGGTATTTATACATTCTTGGACAGATTATTTCCAGTCACAATGGCAATGTAAAGATATAAAAAATGCTTACAAACTCCTTAGATAAATGATGAGGTTATAATGTTGCTCTCATTCAATGGCCCATATATTTCTGTGTTTCTTTTGGCTTCACTCTCTTTAATTTTATGTGGATAAGATCAACCGCCATAAATATCATAATATCATTCATTCAAGTTTCAACAATAA

Coding sequence (CDS)

ATGAGTCTCCTTATGAGCCATTCTGGTGGTTTCCGCATCAATTCCATCAAAATTTCAACCTCTAAACGTTTACAACTGCCCAACACGCCAGGTAAATATGTCGTGCCTATGAAATTTCTTGGGAGAAAATCCGAAGCTGATGATCAAAATAAAGATGTTGAGTTGGTGGAGATTAAAAACAGCAGCAATTATTTTCAAGCCATGGCTTTTGTAAATGCCATTTCTGGTAATGCTTGTGCACTCTGCCTCAGCCATAAGCAATCTGGTATATGGTATCATAGGCAACCTCTTACTCTCAAATCCTATGTTTTCACTCCTACGACAAGTTTCCTTGCAGTAGATGCCGCGAAGGCTGAAACTTTAAAGCATATGTGGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCAGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTGTCTGCTCTTAGTTTTACAAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGTCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATAGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTTGTTGGAAACTCCGTTGCTTTCTCATTAGGACTTGCTACGACCCTGGCGCTGTTAGGTATAGCAGCTTCTTTTGCTGGCAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTGGAGATAATTGAGTTGCGACTACCCTCATTCTTCGACAATTTCGATCCCCGTTCTGCGGCTGCCAGCTTTCCATCAAGTGTGCAAGCGTATCTAGCCGGGCTAACATTTGCTTTGGCTGCATCTCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCCACATCCAAGGATCCCGTCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGCTACGTCGTGCCGTTGCTTCTGGCTGCCTCATTTGCTGGAGCATTGCAGAGCCTTCTGTCGTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGTGCATTACTGTTGAGTGGAGGTATTTATACATTCTTGGACAGATTATTTCCAGTCACAATGGCAATGTAA

Protein sequence

MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSEADDQNKDVELVEIKNSSNYFQAMAFVNAISGNACALCLSHKQSGIWYHRQPLTLKSYVFTPTTSFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVTMAM

Homology

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BLAST of CaUC10G185220 vs. NCBI nr
Match: XP_038903027.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Benincasa hispida])

HSP 1 Score: 623.2 bits (1606), Expect = 1.5e-174
Identity = 337/390 (86.41%), Postives = 350/390 (89.74%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSEADDQNKDVELVEIKN 60
           MSLLMSHSGGF INS KI +SKRLQ  +TPGKYV+P+KFLGR+S ADDQ+KD+ELVE KN
Sbjct: 1   MSLLMSHSGGFSINSFKIKSSKRLQQSSTPGKYVMPIKFLGRQSAADDQSKDIELVENKN 60

Query: 61  SSNYFQAMAFVNAISGNACALCLSHKQSGIWYHRQPLTLKSYVFTPTTSFLAVDAAKAET 120
           SSNYFQAMAFVNAIS                                TSFLAVDAAKAET
Sbjct: 61  SSNYFQAMAFVNAIS-------------------------------ATSFLAVDAAKAET 120

Query: 121 LKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180
           LKHMWEGAA+VYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT
Sbjct: 121 LKHMWEGAAAVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180

Query: 181 SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQ 240
           SLSPCTLSVLPLTLGYIGAFGSGKS+AEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQ
Sbjct: 181 SLSPCTLSVLPLTLGYIGAFGSGKSRAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQ 240

Query: 241 IGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALA 300
           IGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAA+FPSSVQAYLAGLTFALA
Sbjct: 241 IGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALA 300

Query: 301 ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 360
           ASPCSTPVLAT+LGYVATSKDP+IGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS
Sbjct: 301 ASPCSTPVLATILGYVATSKDPIIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 359

Query: 361 SWINPISGALLLSGGIYTFLDRLFPVTMAM 391
           SWINPISGALLL GG+YTFLDRLFPVTMAM
Sbjct: 361 SWINPISGALLLGGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of CaUC10G185220 vs. NCBI nr
Match: TYK03271.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 617.8 bits (1592), Expect = 6.2e-173
Identity = 337/390 (86.41%), Postives = 349/390 (89.49%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSEADDQNKDVELVEIKN 60
           MS+LMS+SGGF INSIKISTSKRL  PNTPGKYV+P+KFLGR+S ADDQ KD+ELVE +N
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCKDIELVENRN 60

Query: 61  SSNYFQAMAFVNAISGNACALCLSHKQSGIWYHRQPLTLKSYVFTPTTSFLAVDAAKAET 120
           S NYFQAMAFVNAIS                                TSFLAVDAAKAET
Sbjct: 61  SRNYFQAMAFVNAIS-------------------------------ATSFLAVDAAKAET 120

Query: 121 LKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180
           LKHMWEGAASVYTLADGG+GDWFGG LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT
Sbjct: 121 LKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180

Query: 181 SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQ 240
           SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGI ASFAGKAYGQ
Sbjct: 181 SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQ 240

Query: 241 IGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALA 300
           IGQGLPLAASGLAVIMGLNLLEIIEL+LPSFF+NFDPRSAAA+FPSSVQAYLAGLTFALA
Sbjct: 241 IGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALA 300

Query: 301 ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 360
           ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS
Sbjct: 301 ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 359

Query: 361 SWINPISGALLLSGGIYTFLDRLFPVTMAM 391
           SWINPISGALLLSGG+YTFLDRLFPVTMAM
Sbjct: 361 SWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of CaUC10G185220 vs. NCBI nr
Match: XP_008452288.1 (PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis melo])

HSP 1 Score: 616.3 bits (1588), Expect = 1.8e-172
Identity = 336/390 (86.15%), Postives = 349/390 (89.49%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSEADDQNKDVELVEIKN 60
           MS+LMS+SGGF INSIKISTSKRL  PNTPGKYV+P+KFLGR+S ADDQ +D+ELVE +N
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCEDIELVENRN 60

Query: 61  SSNYFQAMAFVNAISGNACALCLSHKQSGIWYHRQPLTLKSYVFTPTTSFLAVDAAKAET 120
           S NYFQAMAFVNAIS                                TSFLAVDAAKAET
Sbjct: 61  SRNYFQAMAFVNAIS-------------------------------ATSFLAVDAAKAET 120

Query: 121 LKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180
           LKHMWEGAASVYTLADGG+GDWFGG LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT
Sbjct: 121 LKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180

Query: 181 SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQ 240
           SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGI ASFAGKAYGQ
Sbjct: 181 SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQ 240

Query: 241 IGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALA 300
           IGQGLPLAASGLAVIMGLNLLEIIEL+LPSFF+NFDPRSAAA+FPSSVQAYLAGLTFALA
Sbjct: 241 IGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALA 300

Query: 301 ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 360
           ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS
Sbjct: 301 ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 359

Query: 361 SWINPISGALLLSGGIYTFLDRLFPVTMAM 391
           SWINPISGALLLSGG+YTFLDRLFPVTMAM
Sbjct: 361 SWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of CaUC10G185220 vs. NCBI nr
Match: XP_038903026.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Benincasa hispida])

HSP 1 Score: 616.3 bits (1588), Expect = 1.8e-172
Identity = 337/397 (84.89%), Postives = 350/397 (88.16%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSEADDQNKDVELVEIKN 60
           MSLLMSHSGGF INS KI +SKRLQ  +TPGKYV+P+KFLGR+S ADDQ+KD+ELVE KN
Sbjct: 1   MSLLMSHSGGFSINSFKIKSSKRLQQSSTPGKYVMPIKFLGRQSAADDQSKDIELVENKN 60

Query: 61  SSNYFQAMAFVNAISGNACALCLSHKQSGIWYHRQPLTLKSYVFTPTTSFLAVDAAKAET 120
           SSNYFQAMAFVNAIS                                TSFLAVDAAKAET
Sbjct: 61  SSNYFQAMAFVNAIS-------------------------------ATSFLAVDAAKAET 120

Query: 121 LKHMW-------EGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVI 180
           LKHMW       EGAA+VYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVI
Sbjct: 121 LKHMWNYFPSSQEGAAAVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVI 180

Query: 181 FGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIAASF 240
           FGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS+AEVVGNSVAFSLGLATTLALLGIAASF
Sbjct: 181 FGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVGNSVAFSLGLATTLALLGIAASF 240

Query: 241 AGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSVQAYLA 300
           AGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAA+FPSSVQAYLA
Sbjct: 241 AGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAANFPSSVQAYLA 300

Query: 301 GLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSL 360
           GLTFALAASPCSTPVLAT+LGYVATSKDP+IGGSLLLTYTTGYVVPLLLAASFAGALQSL
Sbjct: 301 GLTFALAASPCSTPVLATILGYVATSKDPIIGGSLLLTYTTGYVVPLLLAASFAGALQSL 360

Query: 361 LSFRKFSSWINPISGALLLSGGIYTFLDRLFPVTMAM 391
           LSFRKFSSWINPISGALLL GG+YTFLDRLFPVTMAM
Sbjct: 361 LSFRKFSSWINPISGALLLGGGVYTFLDRLFPVTMAM 366

[Close]

BLAST of CaUC10G185220 vs. NCBI nr
Match: XP_011650559.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X4 [Cucumis sativus] >KGN56224.2 hypothetical protein Csa_010801 [Cucumis sativus])

HSP 1 Score: 594.7 bits (1532), Expect = 5.6e-166
Identity = 327/390 (83.85%), Postives = 342/390 (87.69%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSEADDQNKDVELVEIKN 60
           MS L+S+SG F INSI+ISTSK    PNTPGK+V+PMKFLG +S ADDQ K +ELV+ +N
Sbjct: 1   MSFLVSNSGAFIINSIQISTSKH---PNTPGKHVMPMKFLGTQSVADDQCKHIELVKNRN 60

Query: 61  SSNYFQAMAFVNAISGNACALCLSHKQSGIWYHRQPLTLKSYVFTPTTSFLAVDAAKAET 120
           S NYFQAMAFVNAIS                                TSFLAVDAAKAET
Sbjct: 61  SRNYFQAMAFVNAIS-------------------------------ATSFLAVDAAKAET 120

Query: 121 LKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180
           LKHMWEGAASVYTLADGG+GDWFGG LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT
Sbjct: 121 LKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180

Query: 181 SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQ 240
           SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGI ASFAGKAYGQ
Sbjct: 181 SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQ 240

Query: 241 IGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALA 300
           IGQGLPLAASGLAVIMGLNLLEIIEL+LPSFF+NFDPRSAAA+FPSSVQAYLAGLTFALA
Sbjct: 241 IGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALA 300

Query: 301 ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 360
           ASPCSTPVLATLLGYVATSKDP+IGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS
Sbjct: 301 ASPCSTPVLATLLGYVATSKDPIIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 356

Query: 361 SWINPISGALLLSGGIYTFLDRLFPVTMAM 391
           SWINPISGALLL GG+YTFLDRLFPVTMAM
Sbjct: 361 SWINPISGALLLGGGLYTFLDRLFPVTMAM 356

[Close]

BLAST of CaUC10G185220 vs. ExPASy Swiss-Prot
Match: Q2QY07 (Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CCDA2 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 3.5e-118
Identity = 226/279 (81.00%), Postives = 251/279 (89.96%), Query Frame = 0


Query: 109 SFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFT 168
           S +A  AA A  +     G++ +  LAD  IGDWFG  LYSAGQQAN AVQDQLSALSFT
Sbjct: 81  SLVAAGAANATEIGDSLLGSSGL-ALADLSIGDWFGNLLYSAGQQANEAVQDQLSALSFT 140

Query: 169 SLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLG 228
           SLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK ++EVVGNSVAFSLGLATTLA+LG
Sbjct: 141 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTLAILG 200

Query: 229 IAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSV 288
           +AASFAGKAYGQ+GQGLP+AASGLAVIMGLNLLE+IEL+LPSFF ++DPR+AAA+ PSSV
Sbjct: 201 VAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANLPSSV 260

Query: 289 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAG 348
           QAYLAGLTFALAASPCSTPVLATLLGYVATS+DP++GGSLLLTYTTGYV PLL+AASFAG
Sbjct: 261 QAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAG 320

Query: 349 ALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVT 388
           ALQSLLSFR++S+WINPISGA LL GG+YT LDRLFP T
Sbjct: 321 ALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 358

[Close]

BLAST of CaUC10G185220 vs. ExPASy Swiss-Prot
Match: Q2RAR6 (Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CCDA1 PE=2 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 4.5e-118
Identity = 225/279 (80.65%), Postives = 251/279 (89.96%), Query Frame = 0


Query: 109 SFLAVDAAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFT 168
           S +A  AA A  +     G++ +  LAD  +GDWFG  LYSAGQQAN AVQDQLSALSFT
Sbjct: 86  SLVAAGAANATEIGDSLLGSSGL-ALADLSVGDWFGNLLYSAGQQANEAVQDQLSALSFT 145

Query: 169 SLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLG 228
           SLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK ++EVVGNSVAFSLGLATTLA+LG
Sbjct: 146 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTLAILG 205

Query: 229 IAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSV 288
           +AASFAGKAYGQ+GQGLP+AASGLAVIMGLNLLE+IEL+LPSFF ++DPR+AAA+ PSSV
Sbjct: 206 VAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANLPSSV 265

Query: 289 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAG 348
           QAYLAGLTFALAASPCSTPVLATLLGYVATS+DP++GGSLLLTYTTGYV PLL+AASFAG
Sbjct: 266 QAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAG 325

Query: 349 ALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFPVT 388
           ALQSLLSFR++S+WINPISGA LL GG+YT LDRLFP T
Sbjct: 326 ALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 363

[Close]

BLAST of CaUC10G185220 vs. ExPASy Swiss-Prot
Match: Q9M5P3 (Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thaliana OX=3702 GN=CCDA PE=1 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.7e-117
Identity = 229/284 (80.63%), Postives = 256/284 (90.14%), Query Frame = 0


Query: 109 SFLAVDAAKAETLKH-MWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSF 168
           + + + +AKA  LK  + + A S+Y LA+G +GD  G FLYSA QQAN AVQDQLSALS 
Sbjct: 71  NLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEAVQDQLSALSV 130

Query: 169 TSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALL 228
           TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+ +V+G++VAF+LGLATTLALL
Sbjct: 131 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLATTLALL 190

Query: 229 GIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSS 288
           GI ASFAGKAYGQIGQGLP+AASGLA++MGLNLLEIIEL+LPSFF+NFDPR+AAA+FPSS
Sbjct: 191 GIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAAANFPSS 250

Query: 289 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFA 348
           VQAYLAGLTFALAASPCSTPVLATLLGYVATS+DPVIGGSLLLTYTTGYV PL++AASFA
Sbjct: 251 VQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASFA 310

Query: 349 GALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFP-VTMAM 391
           GALQSLLS RK S+WINPISGALLL GG+YTFLDRLFP  TM M
Sbjct: 311 GALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354

[Close]

BLAST of CaUC10G185220 vs. ExPASy Swiss-Prot
Match: P51364 (Putative cytochrome c-type biogenesis protein DbsD-like OS=Porphyra purpurea OX=2787 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 7.2e-23
Identity = 70/237 (29.54%), Postives = 126/237 (53.16%), Query Frame = 0


Query: 147 LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSK 206
           LY++    N     QL+ ++  S + +F +G  TS SPC +S+LP+ + YI   G   S+
Sbjct: 7   LYNSQHLINNITLYQLNHINIASFSFVFFSGLFTSFSPCLISILPICIMYISGEGQKLSQ 66

Query: 207 AEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL 266
            + + N   F LG  ++   LG+ A+   K Y Q+  G+P+ ++ + + MG +LL I+  
Sbjct: 67  IDKLKNLFFFCLGAISSFTTLGLIATLLAKTYSQLFNGIPVISALVIIYMGFSLLNIV-- 126

Query: 267 RLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGG 326
             P   +N + R    +   +++ YL+G+   LA S CSTP+  TLL +V ++ +  IG 
Sbjct: 127 --PLSTNNLNTRINNTN--QNIKMYLSGVGIGLAISSCSTPIFVTLLIWVTSNHNLFIGL 186

Query: 327 SLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRL 384
             +L Y+ GY+ P+++ + F+    +  S    ++   P SG +LLS G ++    +
Sbjct: 187 IFILIYSIGYIFPIIIGSLFSSRFLTTASSPFLNNLWAPFSGTILLSAGTFSLFSSI 237

[Close]

BLAST of CaUC10G185220 vs. ExPASy Swiss-Prot
Match: Q1XDC3 (Putative cytochrome c-type biogenesis protein DbsD-like OS=Pyropia yezoensis OX=2788 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.8e-19
Identity = 64/208 (30.77%), Postives = 107/208 (51.44%), Query Frame = 0


Query: 146 FLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 205
           F+Y++    N     QL+ L+ TS + IF +G  TSLSPC +S+LP+ + YI       +
Sbjct: 6   FVYNSQHFVNNITLYQLNHLNSTSFSFIFLSGLFTSLSPCIISILPVCILYIAGETQKLN 65

Query: 206 KAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 265
                 N   F LG  ++   LGI A+   K Y Q   G+P  ++ + + MGLNLL I+ 
Sbjct: 66  PINKTKNLFLFCLGTISSFITLGILATLITKTYSQFFNGIPTISAVVIIYMGLNLLNIVH 125

Query: 266 LRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 325
           +  P F           +   + + YL+G+   +A S CSTP+  TLL ++ +++    G
Sbjct: 126 INSPKF------NGLVTNNNYNFKMYLSGVGIGIAISSCSTPIFVTLLVWINSTQKIFTG 185

Query: 326 GSLLLTYTTGYVVPLLLAASFAGALQSL 354
              +L Y+ GY+ P+++ + F+ +   L
Sbjct: 186 LIFILIYSIGYIFPIIIGSIFSTSFLKL 207

[Close]

BLAST of CaUC10G185220 vs. ExPASy TrEMBL
Match: A0A5D3BU70 (Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00980 PE=3 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 3.0e-173
Identity = 337/390 (86.41%), Postives = 349/390 (89.49%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSEADDQNKDVELVEIKN 60
           MS+LMS+SGGF INSIKISTSKRL  PNTPGKYV+P+KFLGR+S ADDQ KD+ELVE +N
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCKDIELVENRN 60

Query: 61  SSNYFQAMAFVNAISGNACALCLSHKQSGIWYHRQPLTLKSYVFTPTTSFLAVDAAKAET 120
           S NYFQAMAFVNAIS                                TSFLAVDAAKAET
Sbjct: 61  SRNYFQAMAFVNAIS-------------------------------ATSFLAVDAAKAET 120

Query: 121 LKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180
           LKHMWEGAASVYTLADGG+GDWFGG LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT
Sbjct: 121 LKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180

Query: 181 SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQ 240
           SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGI ASFAGKAYGQ
Sbjct: 181 SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQ 240

Query: 241 IGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALA 300
           IGQGLPLAASGLAVIMGLNLLEIIEL+LPSFF+NFDPRSAAA+FPSSVQAYLAGLTFALA
Sbjct: 241 IGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALA 300

Query: 301 ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 360
           ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS
Sbjct: 301 ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 359

Query: 361 SWINPISGALLLSGGIYTFLDRLFPVTMAM 391
           SWINPISGALLLSGG+YTFLDRLFPVTMAM
Sbjct: 361 SWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of CaUC10G185220 vs. ExPASy TrEMBL
Match: A0A1S3BSW3 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493358 PE=3 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 8.7e-173
Identity = 336/390 (86.15%), Postives = 349/390 (89.49%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSEADDQNKDVELVEIKN 60
           MS+LMS+SGGF INSIKISTSKRL  PNTPGKYV+P+KFLGR+S ADDQ +D+ELVE +N
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCEDIELVENRN 60

Query: 61  SSNYFQAMAFVNAISGNACALCLSHKQSGIWYHRQPLTLKSYVFTPTTSFLAVDAAKAET 120
           S NYFQAMAFVNAIS                                TSFLAVDAAKAET
Sbjct: 61  SRNYFQAMAFVNAIS-------------------------------ATSFLAVDAAKAET 120

Query: 121 LKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180
           LKHMWEGAASVYTLADGG+GDWFGG LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT
Sbjct: 121 LKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180

Query: 181 SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQ 240
           SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGI ASFAGKAYGQ
Sbjct: 181 SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQ 240

Query: 241 IGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALA 300
           IGQGLPLAASGLAVIMGLNLLEIIEL+LPSFF+NFDPRSAAA+FPSSVQAYLAGLTFALA
Sbjct: 241 IGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALA 300

Query: 301 ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 360
           ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS
Sbjct: 301 ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 359

Query: 361 SWINPISGALLLSGGIYTFLDRLFPVTMAM 391
           SWINPISGALLLSGG+YTFLDRLFPVTMAM
Sbjct: 361 SWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of CaUC10G185220 vs. ExPASy TrEMBL
Match: A0A5A7TZQ7 (Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00300 PE=3 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.9e-165
Identity = 327/390 (83.85%), Postives = 341/390 (87.44%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSEADDQNKDVELVEIKN 60
           MS+LMS+SGGF INSIKISTSKRL  PNTPGKYV+P+KFLGR+S ADDQ KD+ELVE +N
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCKDIELVENRN 60

Query: 61  SSNYFQAMAFVNAISGNACALCLSHKQSGIWYHRQPLTLKSYVFTPTTSFLAVDAAKAET 120
           S NYFQAMAFVNAIS                                TSFLAVDAAKAET
Sbjct: 61  SRNYFQAMAFVNAIS-------------------------------ATSFLAVDAAKAET 120

Query: 121 LKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180
           LKHMWEGAASVYTLADGG+GDWFGG LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT
Sbjct: 121 LKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVT 180

Query: 181 SLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIAASFAGKAYGQ 240
           SLSPCTLSVLPLTLGYI  +    S  +VVGNSVAFSLGLATTLALLGI ASFAGKAYGQ
Sbjct: 181 SLSPCTLSVLPLTLGYIVNWNI-SSYFQVVGNSVAFSLGLATTLALLGIGASFAGKAYGQ 240

Query: 241 IGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFALA 300
           IGQGLPLAASGLAVIMGLNLLEIIEL+LPSFF+NFDPRSAAA+FPSSVQAYLAGLTFALA
Sbjct: 241 IGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALA 300

Query: 301 ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 360
           ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS
Sbjct: 301 ASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFS 358

Query: 361 SWINPISGALLLSGGIYTFLDRLFPVTMAM 391
           SWINPISGALLLSGG+YTFLDRLFPVTMAM
Sbjct: 361 SWINPISGALLLSGGVYTFLDRLFPVTMAM 358

[Close]

BLAST of CaUC10G185220 vs. ExPASy TrEMBL
Match: A0A6J1JAT1 (cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Cucurbita maxima OX=3661 GN=LOC111483292 PE=3 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 1.1e-164
Identity = 325/391 (83.12%), Postives = 340/391 (86.96%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTPGKYVVPMKFLGRKSEADDQNKDV-ELVEIK 60
           M  LM+HSGGF INSIKISTSKRL L   PGKYV P+ FLG +S A DQ KD+ E VE  
Sbjct: 1   MGFLMTHSGGFGINSIKISTSKRL-LGRPPGKYVAPLNFLGGQSAALDQTKDIDEFVEST 60

Query: 61  NSSNYFQAMAFVNAISGNACALCLSHKQSGIWYHRQPLTLKSYVFTPTTSFLAVDAAKAE 120
           NSSN+F AMAFVNAIS                                TSFLAVDAAKAE
Sbjct: 61  NSSNHFHAMAFVNAIS-------------------------------ATSFLAVDAAKAE 120

Query: 121 TLKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFV 180
           +L+HMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFV
Sbjct: 121 SLEHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFV 180

Query: 181 TSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIAASFAGKAYG 240
           TSLSPCTLSVLPLTLGYIGAFGSGKS+AEVVGNSVAF+LGLATTLALLGIAASFAGKAYG
Sbjct: 181 TSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVGNSVAFALGLATTLALLGIAASFAGKAYG 240

Query: 241 QIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSVQAYLAGLTFAL 300
           QIGQGLPLAASGLAVIMGLNLLEIIEL+LPSFFDNFDPRSAAA+FPSSVQAYLAGLTFAL
Sbjct: 241 QIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDNFDPRSAAANFPSSVQAYLAGLTFAL 300

Query: 301 AASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKF 360
           AASPCSTPVLATLLGYVATSKDP++GGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKF
Sbjct: 301 AASPCSTPVLATLLGYVATSKDPIVGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKF 359

Query: 361 SSWINPISGALLLSGGIYTFLDRLFPVTMAM 391
           SSWINPISGALLL GG+Y+FLDRLFPVTMAM
Sbjct: 361 SSWINPISGALLLGGGVYSFLDRLFPVTMAM 359

[Close]

BLAST of CaUC10G185220 vs. ExPASy TrEMBL
Match: A0A0A0L5A0 (DsbD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099700 PE=3 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.5e-164
Identity = 327/396 (82.58%), Postives = 342/396 (86.36%), Query Frame = 0


Query: 1   MSLLMSHSGGFRINSIKISTSKRLQLPNTP------GKYVVPMKFLGRKSEADDQNKDVE 60
           MS L+S+SG F INSI+ISTSK    PNTP      GK+V+PMKFLG +S ADDQ K +E
Sbjct: 1   MSFLVSNSGAFIINSIQISTSKH---PNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIE 60

Query: 61  LVEIKNSSNYFQAMAFVNAISGNACALCLSHKQSGIWYHRQPLTLKSYVFTPTTSFLAVD 120
           LV+ +NS NYFQAMAFVNAIS                                TSFLAVD
Sbjct: 61  LVKNRNSRNYFQAMAFVNAIS-------------------------------ATSFLAVD 120

Query: 121 AAKAETLKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIF 180
           AAKAETLKHMWEGAASVYTLADGG+GDWFGG LYSAGQQANVAVQDQLSALSFTSLAVIF
Sbjct: 121 AAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIF 180

Query: 181 GAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIAASFA 240
           GAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGI ASFA
Sbjct: 181 GAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFA 240

Query: 241 GKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSSVQAYLAG 300
           GKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+LPSFF+NFDPRSAAA+FPSSVQAYLAG
Sbjct: 241 GKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAG 300

Query: 301 LTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLL 360
           LTFALAASPCSTPVLATLLGYVATSKDP+IGGSLLLTYTTGYVVPLLLAASFAGALQSLL
Sbjct: 301 LTFALAASPCSTPVLATLLGYVATSKDPIIGGSLLLTYTTGYVVPLLLAASFAGALQSLL 360

Query: 361 SFRKFSSWINPISGALLLSGGIYTFLDRLFPVTMAM 391
           SFRKFSSWINPISGALLL GG+YTFLDRLFPVTMAM
Sbjct: 361 SFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 362

[Close]

BLAST of CaUC10G185220 vs. TAIR 10
Match: AT5G54290.1 (cytochrome c biogenesis protein family )

HSP 1 Score: 424.1 bits (1089), Expect = 1.2e-118
Identity = 229/284 (80.63%), Postives = 256/284 (90.14%), Query Frame = 0


Query: 109 SFLAVDAAKAETLKH-MWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSF 168
           + + + +AKA  LK  + + A S+Y LA+G +GD  G FLYSA QQAN AVQDQLSALS 
Sbjct: 71  NLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEAVQDQLSALSV 130

Query: 169 TSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALL 228
           TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+ +V+G++VAF+LGLATTLALL
Sbjct: 131 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLATTLALL 190

Query: 229 GIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSS 288
           GI ASFAGKAYGQIGQGLP+AASGLA++MGLNLLEIIEL+LPSFF+NFDPR+AAA+FPSS
Sbjct: 191 GIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAAANFPSS 250

Query: 289 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFA 348
           VQAYLAGLTFALAASPCSTPVLATLLGYVATS+DPVIGGSLLLTYTTGYV PL++AASFA
Sbjct: 251 VQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASFA 310

Query: 349 GALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFP-VTMAM 391
           GALQSLLS RK S+WINPISGALLL GG+YTFLDRLFP  TM M
Sbjct: 311 GALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354

[Close]

BLAST of CaUC10G185220 vs. TAIR 10
Match: AT5G54290.2 (cytochrome c biogenesis protein family )

HSP 1 Score: 424.1 bits (1089), Expect = 1.2e-118
Identity = 229/284 (80.63%), Postives = 256/284 (90.14%), Query Frame = 0


Query: 109 SFLAVDAAKAETLKH-MWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSF 168
           + + + +AKA  LK  + + A S+Y LA+G +GD  G FLYSA QQAN AVQDQLSALS 
Sbjct: 72  NLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEAVQDQLSALSV 131

Query: 169 TSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALL 228
           TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+ +V+G++VAF+LGLATTLALL
Sbjct: 132 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLATTLALL 191

Query: 229 GIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSFFDNFDPRSAAASFPSS 288
           GI ASFAGKAYGQIGQGLP+AASGLA++MGLNLLEIIEL+LPSFF+NFDPR+AAA+FPSS
Sbjct: 192 GIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAAANFPSS 251

Query: 289 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFA 348
           VQAYLAGLTFALAASPCSTPVLATLLGYVATS+DPVIGGSLLLTYTTGYV PL++AASFA
Sbjct: 252 VQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASFA 311

Query: 349 GALQSLLSFRKFSSWINPISGALLLSGGIYTFLDRLFP-VTMAM 391
           GALQSLLS RK S+WINPISGALLL GG+YTFLDRLFP  TM M
Sbjct: 312 GALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 355

The following BLAST results are available for this feature:

BLAST of CaUC10G185220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903027.1	1.5e-174	86.41	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Beninca...	[more]
TYK03271.1	6.2e-173	86.41	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis...	[more]
XP_008452288.1	1.8e-172	86.15	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform ...	[more]
XP_038903026.1	1.8e-172	84.89	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Beninca...	[more]
XP_011650559.1	5.6e-166	83.85	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X4 [Cucumis...	[more]

BLAST of CaUC10G185220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QY07	3.5e-118	81.00	Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa s...	[more]
Q2RAR6	4.5e-118	80.65	Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa s...	[more]
Q9M5P3	1.7e-117	80.63	Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thal...	[more]
P51364	7.2e-23	29.54	Putative cytochrome c-type biogenesis protein DbsD-like OS=Porphyra purpurea OX=...	[more]
Q1XDC3	2.8e-19	30.77	Putative cytochrome c-type biogenesis protein DbsD-like OS=Pyropia yezoensis OX=...	[more]

BLAST of CaUC10G185220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BU70	3.0e-173	86.41	Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A1S3BSW3	8.7e-173	86.15	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A5A7TZQ7	3.9e-165	83.85	Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A6J1JAT1	1.1e-164	83.12	cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Cucurbita maxima...	[more]
A0A0A0L5A0	2.5e-164	82.58	DsbD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099700 PE=3 S...	[more]

BLAST of CaUC10G185220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54290.1	1.2e-118	80.63	cytochrome c biogenesis protein family	[more]
AT5G54290.2	1.2e-118	80.63	cytochrome c biogenesis protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003834	Cytochrome C biogenesis protein, transmembrane domain	PFAM	PF02683	DsbD	coord: 173..380 e-value: 2.1E-44 score: 152.0
None	No IPR available	PANTHER	PTHR31272	CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED	coord: 101..390
None	No IPR available	PANTHER	PTHR31272:SF6	CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN	coord: 101..390

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G185220.1	CaUC10G185220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0017004	cytochrome complex assembly
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane