CaUC10G184720 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G184720
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	YL1_C domain-containing protein
Location	Ciama_Chr10: 6932528 .. 6932734 (-)
RNA-Seq Expression	CaUC10G184720
Synteny	CaUC10G184720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGTATAACTGAAAAATCTAGGGTTGTGACGAAGAATCTATCGCCATGCGATGTTGAAGCTCTCAAGAAATGTTTGCAGGATAACAATGGCGATCGTGTCAAGTGCGAGTCTCAAATACAAGCCTTCAAGTCTTCTTGCTCCCTAAAGAAACCAAATCCATCTTTGCAATCTGGAAGGAATGACTTCGACACTAGTGTTTGA

mRNA sequence

ATGGATGGTATAACTGAAAAATCTAGGGTTGTGACGAAGAATCTATCGCCATGCGATGTTGAAGCTCTCAAGAAATGTTTGCAGGATAACAATGGCGATCGTGTCAAGTGCGAGTCTCAAATACAAGCCTTCAAGTCTTCTTGCTCCCTAAAGAAACCAAATCCATCTTTGCAATCTGGAAGGAATGACTTCGACACTAGTGTTTGA

Coding sequence (CDS)

ATGGATGGTATAACTGAAAAATCTAGGGTTGTGACGAAGAATCTATCGCCATGCGATGTTGAAGCTCTCAAGAAATGTTTGCAGGATAACAATGGCGATCGTGTCAAGTGCGAGTCTCAAATACAAGCCTTCAAGTCTTCTTGCTCCCTAAAGAAACCAAATCCATCTTTGCAATCTGGAAGGAATGACTTCGACACTAGTGTTTGA

Protein sequence

MDGITEKSRVVTKNLSPCDVEALKKCLQDNNGDRVKCESQIQAFKSSCSLKKPNPSLQSGRNDFDTSV

Homology

[Close]

BLAST of CaUC10G184720 vs. NCBI nr
Match: KAE8650146.1 (hypothetical protein Csa_010997, partial [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 6.4e-25
Identity = 60/66 (90.91%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 1  MDGITEKSRVVTKNLSPCDVEALKKCLQDNNGDRVKCESQIQAFKSSCSLKKPNPSLQSG 60
          MDGITEKSR VTKN SPCDVEALKKCLQ+NNGDRVKCESQIQAF  SCSLKK NPSLQSG
Sbjct: 1  MDGITEKSRAVTKNPSPCDVEALKKCLQENNGDRVKCESQIQAFMFSCSLKKSNPSLQSG 60

Query: 61 RNDFDT 67
          RNDFDT
Sbjct: 61 RNDFDT 66

[Close]

BLAST of CaUC10G184720 vs. NCBI nr
Match: KAF3954648.1 (hypothetical protein CMV_020027 [Castanea mollissima] >KAF3976702.1 hypothetical protein CMV_000104 [Castanea mollissima])

HSP 1 Score: 84.0 bits (206), Expect = 5.6e-13
Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 7  KSRVVTKNLSPCDVEALKKCLQDNNGDRVKCESQIQAFKSSCSLKKPNPSLQS 60
          +S  V K +SPCDVEALKKCL++N GD VKC+SQI+AFKSSCS+KKPNPS +S
Sbjct: 6  ESNTVKKIMSPCDVEALKKCLEENKGDYVKCQSQIEAFKSSCSIKKPNPSQES 58

[Close]

BLAST of CaUC10G184720 vs. NCBI nr
Match: KAE9589066.1 (hypothetical protein Lalb_Chr21g0305111 [Lupinus albus])

HSP 1 Score: 84.0 bits (206), Expect = 5.6e-13
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 1  MDGITEKSRVVTKNLSPCDVEALKKCLQDNNGDRVKCESQIQAFKSSCSLKKPNPS 57
          MD   E+++ V K +S CDV+ALKKCL+DN GD VKC+SQI+AFKSSCSLKKPNPS
Sbjct: 1  MDQKVEENKSVKKIISACDVDALKKCLEDNKGDYVKCQSQIEAFKSSCSLKKPNPS 56

[Close]

BLAST of CaUC10G184720 vs. NCBI nr
Match: KDP22261.1 (hypothetical protein JCGZ_26092 [Jatropha curcas])

HSP 1 Score: 82.4 bits (202), Expect = 1.6e-12
Identity = 40/56 (71.43%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 7  KSRVVTKNLSPCDVEALKKCLQDNNGDRVKCESQIQAFKSSCSLKKPNPSLQSGRN 63
          +S  V K +SPCDVEALKKCL+DN GD VKC+ QI+AFKSSCSLKKP  SLQS  N
Sbjct: 36 ESNGVKKVMSPCDVEALKKCLEDNKGDHVKCQLQIEAFKSSCSLKKPTSSLQSQTN 91

[Close]

BLAST of CaUC10G184720 vs. NCBI nr
Match: KAE8077725.1 (hypothetical protein FH972_016259 [Carpinus fangiana])

HSP 1 Score: 81.6 bits (200), Expect = 2.8e-12
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 7  KSRVVTKNLSPCDVEALKKCLQDNNGDRVKCESQIQAFKSSCSLKKPNPSLQS 60
          +S    K +SPCDVEALKKCL++NNGD VKC+SQI+AFKSSCSLKKPN S +S
Sbjct: 6  ESNSAKKIMSPCDVEALKKCLEENNGDYVKCQSQIEAFKSSCSLKKPNSSQES 58

[Close]

BLAST of CaUC10G184720 vs. ExPASy TrEMBL
Match: A0A0A0L2G8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G081365 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25
Identity = 61/68 (89.71%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 1  MDGITEKSRVVTKNLSPCDVEALKKCLQDNNGDRVKCESQIQAFKSSCSLKKPNPSLQSG 60
          MDGITEKSR VTKN SPCDVEALKKCLQ+NNGDRVKCESQIQAF  SCSLKK NPSLQSG
Sbjct: 1  MDGITEKSRAVTKNPSPCDVEALKKCLQENNGDRVKCESQIQAFMFSCSLKKSNPSLQSG 60

Query: 61 RNDFDTSV 69
          RNDFDT V
Sbjct: 61 RNDFDTGV 68

[Close]

BLAST of CaUC10G184720 vs. ExPASy TrEMBL
Match: A0A6A4N3Q2 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr21g0305111 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.7e-13
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 1  MDGITEKSRVVTKNLSPCDVEALKKCLQDNNGDRVKCESQIQAFKSSCSLKKPNPS 57
          MD   E+++ V K +S CDV+ALKKCL+DN GD VKC+SQI+AFKSSCSLKKPNPS
Sbjct: 1  MDQKVEENKSVKKIISACDVDALKKCLEDNKGDYVKCQSQIEAFKSSCSLKKPNPS 56

[Close]

BLAST of CaUC10G184720 vs. ExPASy TrEMBL
Match: A0A067JEH6 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26092 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.9e-13
Identity = 40/56 (71.43%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 7  KSRVVTKNLSPCDVEALKKCLQDNNGDRVKCESQIQAFKSSCSLKKPNPSLQSGRN 63
          +S  V K +SPCDVEALKKCL+DN GD VKC+ QI+AFKSSCSLKKP  SLQS  N
Sbjct: 36 ESNGVKKVMSPCDVEALKKCLEDNKGDHVKCQLQIEAFKSSCSLKKPTSSLQSQTN 91

[Close]

BLAST of CaUC10G184720 vs. ExPASy TrEMBL
Match: A0A5N6RFC3 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016259 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 7  KSRVVTKNLSPCDVEALKKCLQDNNGDRVKCESQIQAFKSSCSLKKPNPSLQS 60
          +S    K +SPCDVEALKKCL++NNGD VKC+SQI+AFKSSCSLKKPN S +S
Sbjct: 6  ESNSAKKIMSPCDVEALKKCLEENNGDYVKCQSQIEAFKSSCSLKKPNSSQES 58

[Close]

BLAST of CaUC10G184720 vs. ExPASy TrEMBL
Match: A0A5N6RHF1 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016259 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 7  KSRVVTKNLSPCDVEALKKCLQDNNGDRVKCESQIQAFKSSCSLKKPNPSLQS 60
          +S    K +SPCDVEALKKCL++NNGD VKC+SQI+AFKSSCSLKKPN S +S
Sbjct: 6  ESNSAKKIMSPCDVEALKKCLEENNGDYVKCQSQIEAFKSSCSLKKPNSSQES 58

The following BLAST results are available for this feature:

BLAST of CaUC10G184720 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650146.1	6.4e-25	90.91	hypothetical protein Csa_010997, partial [Cucumis sativus]	[more]
KAF3954648.1	5.6e-13	71.70	hypothetical protein CMV_020027 [Castanea mollissima] >KAF3976702.1 hypothetical...	[more]
KAE9589066.1	5.6e-13	69.64	hypothetical protein Lalb_Chr21g0305111 [Lupinus albus]	[more]
KDP22261.1	1.6e-12	71.43	hypothetical protein JCGZ_26092 [Jatropha curcas]	[more]
KAE8077725.1	2.8e-12	71.70	hypothetical protein FH972_016259 [Carpinus fangiana]	[more]

BLAST of CaUC10G184720 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC10G184720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2G8	1.1e-25	89.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G081365 PE=4 SV=1	[more]
A0A6A4N3Q2	2.7e-13	69.64	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr21g0305111 PE=4 SV=1	[more]
A0A067JEH6	7.9e-13	71.43	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26092 PE=4 SV=1	[more]
A0A5N6RFC3	1.4e-12	71.70	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016259 PE=4 SV=1	[more]
A0A5N6RHF1	1.4e-12	71.70	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016259 PE=4 SV=1	[more]

BLAST of CaUC10G184720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36856:SF1	OS07G0175200 PROTEIN	coord: 1..66
None	No IPR available	PANTHER	PTHR36856	OS07G0175200 PROTEIN	coord: 1..66
IPR009069	Cysteine alpha-hairpin motif superfamily	SUPERFAMILY	47072	Cysteine alpha-hairpin motif	coord: 14..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G184720.1	CaUC10G184720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0019787	ubiquitin-like protein transferase activity