CaUC10G183600 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G183600
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	PSI-G
Location	Ciama_Chr10: 5516696 .. 5517380 (-)
RNA-Seq Expression	CaUC10G183600
Synteny	CaUC10G183600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAAAATGGCAAAAGGAATTTGGATCCAAGAATCTGTAATCTAGAAGTAGCCAATCAAATTCATCCAAGTCACGTCCCAAAATCTCCCTTCATTCCATTCTCATCCTTACAATCCATATCTCTGTTTCCAGCTAAATTATATGATCCTCATATCCTCCCTCAATTATCCACTCCAAATCTCCCCCACAACATTATCACCACCAATGGCCGCCGCCGCCTCCTCCTCTGCCGTCTTCGCCGCCCCAACCTTCTCGGCCACCGCCACAAGGCAGCAGCCGAGCCCCACCACCGTATCATTCCAAGGCCTCCGTGCACTCCCGGGCGTGAAGTCAAGCCGGTCGGGAGTCGCGGCAAAGCCCCGGAGATCGGTGGTGGTGAAGGCGGAGTTGAACCCATCTCTAGTTATAAGCCTGAGCACTGGGCTGTCGTTGTTCTTAGGAAGGTTTGTTTTCTTCAATTTCCAAAGGGAGAATGTGAGCAAGCAAGTGCCAGAGCAAAATGGGCTGACCCATTTTGAGGCTGGTGATGTGAGGGCTAAAGAATATATTAGCCTATTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCTATTGGCCATATTGTTGCTTATTATATCTTGGCTACTTCTAGCAATGGATATGATCCCAAGTTCTTCTAG

mRNA sequence

ATGAAAAAAAATGGCAAAAGGAATTTGGATCCAAGAATCTGTAATCTAGAACTAAATTATATGATCCTCATATCCTCCCTCAATTATCCACTCCAAATCTCCCCCACAACATTATCACCACCAATGGCCGCCGCCGCCTCCTCCTCTGCCGTCTTCGCCGCCCCAACCTTCTCGGCCACCGCCACAAGGCAGCAGCCGAGCCCCACCACCGTATCATTCCAAGGCCTCCGTGCACTCCCGGGCGTGAAGTCAAGCCGGTCGGGAGTCGCGGCAAAGCCCCGGAGATCGGTGGTGGTGAAGGCGGAGTTGAACCCATCTCTAGTTATAAGCCTGAGCACTGGGCTGTCGTTGTTCTTAGGAAGGTTTGTTTTCTTCAATTTCCAAAGGGAGAATGTGAGCAAGCAAGTGCCAGAGCAAAATGGGCTGACCCATTTTGAGGCTGGTGATGTGAGGGCTAAAGAATATATTAGCCTATTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCTATTGGCCATATTGTTGCTTATTATATCTTGGCTACTTCTAGCAATGGATATGATCCCAAGTTCTTCTAG

Coding sequence (CDS)

ATGAAAAAAAATGGCAAAAGGAATTTGGATCCAAGAATCTGTAATCTAGAACTAAATTATATGATCCTCATATCCTCCCTCAATTATCCACTCCAAATCTCCCCCACAACATTATCACCACCAATGGCCGCCGCCGCCTCCTCCTCTGCCGTCTTCGCCGCCCCAACCTTCTCGGCCACCGCCACAAGGCAGCAGCCGAGCCCCACCACCGTATCATTCCAAGGCCTCCGTGCACTCCCGGGCGTGAAGTCAAGCCGGTCGGGAGTCGCGGCAAAGCCCCGGAGATCGGTGGTGGTGAAGGCGGAGTTGAACCCATCTCTAGTTATAAGCCTGAGCACTGGGCTGTCGTTGTTCTTAGGAAGGTTTGTTTTCTTCAATTTCCAAAGGGAGAATGTGAGCAAGCAAGTGCCAGAGCAAAATGGGCTGACCCATTTTGAGGCTGGTGATGTGAGGGCTAAAGAATATATTAGCCTATTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCTATTGGCCATATTGTTGCTTATTATATCTTGGCTACTTCTAGCAATGGATATGATCCCAAGTTCTTCTAG

Protein sequence

MKKNGKRNLDPRICNLELNYMILISSLNYPLQISPTTLSPPMAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Homology

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BLAST of CaUC10G183600 vs. NCBI nr
Match: XP_038903014.1 (photosystem I reaction center subunit V, chloroplastic [Benincasa hispida])

HSP 1 Score: 285.0 bits (728), Expect = 4.9e-73
Identity = 148/158 (93.67%), Postives = 151/158 (95.57%), Query Frame = 0


Query: 42  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKA 101
           MA AASSSA+FAAPTFSA ATRQQP+PT VSFQGLRALP VKSSR GVA K RRSVVVKA
Sbjct: 1   MATAASSSAIFAAPTFSAAATRQQPTPTAVSFQGLRALPSVKSSRPGVAIKSRRSVVVKA 60

Query: 102 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKS 161
           ELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEY+SLLKS
Sbjct: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120

Query: 162 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of CaUC10G183600 vs. NCBI nr
Match: XP_004149569.1 (photosystem I reaction center subunit V, chloroplastic [Cucumis sativus] >KGN56044.1 hypothetical protein Csa_010215 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 4.9e-73
Identity = 148/158 (93.67%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 42  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKA 101
           MAAAASSSAVFAAPTFSATATRQQP+PTT+SFQGLRALP VKSSRS VA K RRS+ VKA
Sbjct: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60

Query: 102 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKS 161
           ELNPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNGLTHFEAGDVRAKEY+SLLKS
Sbjct: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120

Query: 162 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of CaUC10G183600 vs. NCBI nr
Match: XP_008449063.1 (PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis melo] >KAA0065757.1 photosystem I reaction center subunit V [Cucumis melo var. makuwa] >TYK13781.1 photosystem I reaction center subunit V [Cucumis melo var. makuwa])

HSP 1 Score: 282.7 bits (722), Expect = 2.4e-72
Identity = 147/156 (94.23%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 44  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAEL 103
           AAASSSAVF APTFSATATRQQPSPTT+SFQGLRALP VKSSRS VA K RRS+ VKAEL
Sbjct: 2   AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAEL 61

Query: 104 NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKSND 163
           NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEY+SLLKSND
Sbjct: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121

Query: 164 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 157

[Close]

BLAST of CaUC10G183600 vs. NCBI nr
Match: XP_022934047.1 (photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 8.0e-68
Identity = 138/158 (87.34%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 42  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKA 101
           MAAAASSSAVFAA +FSA+  RQQP+P+T+S+QGLR LPG+KSSRS    K  RSVVVKA
Sbjct: 1   MAAAASSSAVFAASSFSASVGRQQPNPSTISYQGLRPLPGIKSSRSLAGVKSPRSVVVKA 60

Query: 102 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKS 161
           ELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG+THFEAGDVRAKEY+SLLKS
Sbjct: 61  ELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKS 120

Query: 162 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of CaUC10G183600 vs. NCBI nr
Match: KAG6596752.1 (Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.9 bits (681), Expect = 1.4e-67
Identity = 137/158 (86.71%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 42  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKA 101
           MAAAASSSAVFAA +FS    RQQP+P+T+S+QGLR LPG+KSSRS    K +RSVVVKA
Sbjct: 1   MAAAASSSAVFAASSFSTAVGRQQPNPSTISYQGLRPLPGIKSSRSLAGVKSQRSVVVKA 60

Query: 102 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKS 161
           ELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG+THFEAGDVRAKEY+SLLKS
Sbjct: 61  ELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKS 120

Query: 162 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of CaUC10G183600 vs. ExPASy Swiss-Prot
Match: Q9S7N7 (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAG PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.6e-50
Identity = 110/160 (68.75%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 45  AASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALP-GVKSS---RSGVAAKPRRSVVVK 104
           A S+SA+ +  TFS   + +  +P ++SF GLR L  G  SS   +     +   S VV+
Sbjct: 2   ATSASALLSPTTFSTAISHK--NPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVR 61

Query: 105 AELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYISLL 164
           AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQNG THFEAGD RAKEY+SLL
Sbjct: 62  AELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLL 121

Query: 165 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           KSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Sbjct: 122 KSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFF 159

[Close]

BLAST of CaUC10G183600 vs. ExPASy Swiss-Prot
Match: P12357 (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAG PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.8e-50
Identity = 112/165 (67.88%), Postives = 123/165 (74.55%), Query Frame = 0


Query: 43  AAAASSSAVFAAPTFSATATRQQPSP----TTVSFQGLRAL----PGVKSSRSGVAAKPR 102
           AA AS S+   AP  S     QQ          SF GLR L        SS S   +  R
Sbjct: 3   AATASLSSTLLAPCSSKQPQPQQQHQHQQLKCKSFSGLRPLKLNISSNNSSSSLSMSSAR 62

Query: 103 RSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKE 162
           RS+  +AEL+PSLVISLSTGLSLFLGRFVFFNFQREN++KQVPEQNG++HFEAGD RAKE
Sbjct: 63  RSMTCRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQVPEQNGMSHFEAGDTRAKE 122

Query: 163 YISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           Y+SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF
Sbjct: 123 YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFF 167

[Close]

BLAST of CaUC10G183600 vs. ExPASy Swiss-Prot
Match: Q00327 (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAG PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.6e-48
Identity = 101/143 (70.63%), Postives = 115/143 (80.42%), Query Frame = 0


Query: 59  ATATRQQPSPTTVSFQGLRALPGVKSSRS--GVAAKPRRSVVVKAELNPSLVISLSTGLS 118
           AT+T    SP  V+  GLR  P  +++ S  GV+   RRSV  +A L PS+VISLSTGLS
Sbjct: 2   ATSTAAVLSPPAVA--GLRLAPSPRAAASFRGVSPPARRSVAARAALEPSVVISLSTGLS 61

Query: 119 LFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWG 178
           L +GRFVFFNFQRENV+KQVPEQNG THFEAGD RAKE+  +LKSNDPVGFN+VDVLAWG
Sbjct: 62  LVMGRFVFFNFQRENVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWG 121

Query: 179 SIGHIVAYYILATSSNGYDPKFF 200
           SIGHIVAYYILAT+SNGYDP FF
Sbjct: 122 SIGHIVAYYILATTSNGYDPPFF 142

[Close]

BLAST of CaUC10G183600 vs. ExPASy Swiss-Prot
Match: Q9SPM4 (Photosystem I reaction center subunit V, chloroplastic OS=Syntrichia ruralis OX=38588 GN=PSAG PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-19
Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 104 NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYISLLKSN 163
           N S +IS ST   L LGRFVF  FQR  VS+  +PEQNG+          + + S+LK+N
Sbjct: 17  NTSFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTTRRVTAVRRRWWSMLKTN 76

Query: 164 DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD 196
           DP GF +VDVLAWG++GH V ++ILAT++NGY+
Sbjct: 77  DPAGFTLVDVLAWGALGHAVGFFILATATNGYN 109

[Close]

BLAST of CaUC10G183600 vs. ExPASy Swiss-Prot
Match: P14224 (Photosystem I reaction center subunit V, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAG PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.3e-15
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 0


Query: 74  QGLRALPGVK-SSRSGVAAKPRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENV 133
           Q L + P ++ S+R      PR +VV KA L+P +VIS ST   L +GRFVF  +QR   
Sbjct: 2   QTLASRPSLRASARVAPRRAPRVAVVTKAALDPQIVISGSTAAFLAIGRFVFLGYQRREA 61

Query: 134 ---SKQVPEQNGLTHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT 192
              S   P+  G T+F+  D++     ++  +NDP GFNI+DV  WG++GH V + +LA 
Sbjct: 62  NFDSTVGPKTTGATYFD--DLQKNS--TIFATNDPAGFNIIDVAGWGALGHAVGFAVLAI 119

[Close]

BLAST of CaUC10G183600 vs. ExPASy TrEMBL
Match: A0A0A0L4W3 (PSI-G OS=Cucumis sativus OX=3659 GN=Csa_3G060980 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.4e-73
Identity = 148/158 (93.67%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 42  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKA 101
           MAAAASSSAVFAAPTFSATATRQQP+PTT+SFQGLRALP VKSSRS VA K RRS+ VKA
Sbjct: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSSRSVVATKSRRSMTVKA 60

Query: 102 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKS 161
           ELNPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNGLTHFEAGDVRAKEY+SLLKS
Sbjct: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQVPEQNGLTHFEAGDVRAKEYVSLLKS 120

Query: 162 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of CaUC10G183600 vs. ExPASy TrEMBL
Match: A0A5D3CPR0 (PSI-G OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00430 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.2e-72
Identity = 147/156 (94.23%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 44  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAEL 103
           AAASSSAVF APTFSATATRQQPSPTT+SFQGLRALP VKSSRS VA K RRS+ VKAEL
Sbjct: 2   AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAEL 61

Query: 104 NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKSND 163
           NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEY+SLLKSND
Sbjct: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121

Query: 164 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 157

[Close]

BLAST of CaUC10G183600 vs. ExPASy TrEMBL
Match: A0A1S3BKK6 (PSI-G OS=Cucumis melo OX=3656 GN=LOC103491045 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.2e-72
Identity = 147/156 (94.23%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 44  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKAEL 103
           AAASSSAVF APTFSATATRQQPSPTT+SFQGLRALP VKSSRS VA K RRS+ VKAEL
Sbjct: 2   AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSSRSIVATKTRRSMTVKAEL 61

Query: 104 NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKSND 163
           NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEY+SLLKSND
Sbjct: 62  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSND 121

Query: 164 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 157

[Close]

BLAST of CaUC10G183600 vs. ExPASy TrEMBL
Match: A0A6J1F1K2 (PSI-G OS=Cucurbita moschata OX=3662 GN=LOC111441287 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.9e-68
Identity = 138/158 (87.34%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 42  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKA 101
           MAAAASSSAVFAA +FSA+  RQQP+P+T+S+QGLR LPG+KSSRS    K  RSVVVKA
Sbjct: 1   MAAAASSSAVFAASSFSASVGRQQPNPSTISYQGLRPLPGIKSSRSLAGVKSPRSVVVKA 60

Query: 102 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKS 161
           ELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG+THFEAGDVRAKEY+SLLKS
Sbjct: 61  ELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKS 120

Query: 162 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of CaUC10G183600 vs. ExPASy TrEMBL
Match: A0A6J1L2L3 (PSI-G OS=Cucurbita maxima OX=3661 GN=LOC111498528 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 8.7e-68
Identity = 137/158 (86.71%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 42  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPGVKSSRSGVAAKPRRSVVVKA 101
           MAA ASSSAVFAA +FSA   RQQP+P+T+S+QGLR LPG+KSSRS  A K  RS+VVKA
Sbjct: 1   MAAVASSSAVFAASSFSAAVRRQQPNPSTISYQGLRPLPGIKSSRSLAAVKSPRSLVVKA 60

Query: 102 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYISLLKS 161
           ELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG+THFEAGDVRAKEY+SLLKS
Sbjct: 61  ELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGDVRAKEYVSLLKS 120

Query: 162 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of CaUC10G183600 vs. TAIR 10
Match: AT1G55670.1 (photosystem I subunit G )

HSP 1 Score: 199.1 bits (505), Expect = 3.3e-51
Identity = 110/160 (68.75%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 45  AASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALP-GVKSS---RSGVAAKPRRSVVVK 104
           A S+SA+ +  TFS   + +  +P ++SF GLR L  G  SS   +     +   S VV+
Sbjct: 2   ATSASALLSPTTFSTAISHK--NPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVR 61

Query: 105 AELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYISLL 164
           AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQNG THFEAGD RAKEY+SLL
Sbjct: 62  AELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLL 121

Query: 165 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 200
           KSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Sbjct: 122 KSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFF 159

The following BLAST results are available for this feature:

BLAST of CaUC10G183600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903014.1	4.9e-73	93.67	photosystem I reaction center subunit V, chloroplastic [Benincasa hispida]	[more]
XP_004149569.1	4.9e-73	93.67	photosystem I reaction center subunit V, chloroplastic [Cucumis sativus] >KGN560...	[more]
XP_008449063.1	2.4e-72	94.23	PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis melo]...	[more]
XP_022934047.1	8.0e-68	87.34	photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata]	[more]
KAG6596752.1	1.4e-67	86.71	Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyr...	[more]

BLAST of CaUC10G183600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7N7	4.6e-50	68.75	Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana O...	[more]
P12357	7.8e-50	67.88	Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea OX=3...	[more]
Q00327	5.6e-48	70.63	Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare OX=451...	[more]
Q9SPM4	1.4e-19	51.61	Photosystem I reaction center subunit V, chloroplastic OS=Syntrichia ruralis OX=...	[more]
P14224	6.3e-15	40.16	Photosystem I reaction center subunit V, chloroplastic OS=Chlamydomonas reinhard...	[more]

BLAST of CaUC10G183600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4W3	2.4e-73	93.67	PSI-G OS=Cucumis sativus OX=3659 GN=Csa_3G060980 PE=3 SV=1	[more]
A0A5D3CPR0	1.2e-72	94.23	PSI-G OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00430 PE=3 SV=...	[more]
A0A1S3BKK6	1.2e-72	94.23	PSI-G OS=Cucumis melo OX=3656 GN=LOC103491045 PE=3 SV=1	[more]
A0A6J1F1K2	3.9e-68	87.34	PSI-G OS=Cucurbita moschata OX=3662 GN=LOC111441287 PE=3 SV=1	[more]
A0A6J1L2L3	8.7e-68	86.71	PSI-G OS=Cucurbita maxima OX=3661 GN=LOC111498528 PE=3 SV=1	[more]

BLAST of CaUC10G183600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55670.1	3.3e-51	68.75	photosystem I subunit G	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023618	Photosystem I PsaG/PsaK domain, chloroplastic	GENE3D	1.10.286.40		coord: 105..199 e-value: 9.8E-48 score: 162.5
IPR017494	Photosystem I PsaG, plant	TIGRFAM	TIGR03051	TIGR03051	coord: 108..195 e-value: 1.5E-42 score: 141.9
IPR000549	Photosystem I PsaG/PsaK protein	PFAM	PF01241	PSI_PSAK	coord: 105..194 e-value: 6.0E-22 score: 77.4
IPR000549	Photosystem I PsaG/PsaK protein	PROSITE	PS01026	PHOTOSYSTEM_I_PSAGK	coord: 166..183
IPR016370	Photosystem I PsaG/PsaK, plant	PANTHER	PTHR34195	PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED	coord: 45..199
None	No IPR available	PANTHER	PTHR34195:SF4	BNAC03G70700D PROTEIN	coord: 45..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G183600.1	CaUC10G183600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0016020	membrane