CaUC10G183540 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G183540
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr10: 5452683 .. 5454685 (+)
RNA-Seq Expression	CaUC10G183540
Synteny	CaUC10G183540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTCTTTGAAGATTCCCACTTTCCTCCACCTTCTTCCTCTATTATAATGTCATCCACAGTCAGTGAAAAGCCACAAGAAAATGTAAGACTAGGCTTCATTTTTGGCACGAACACTGGCTCTGCCTCATTGTTGAGAATCTGTAGGACCTTCCTCATCGAAGGTCTTGCCGAGCTATCCGGGTTTGCACAGCTCAGTCCGACAAGTAAGAGCTTCCTCATTTCTTCTTCCCTGAACTCTCCGTTCAACCTTTTATCAGCTGCTTCAATGATCTTGCCTTGAGAATGCAATCCCCAAACCCAATCTACCAGATTGACCATCTTTTGAGTACCTGGTTCTCTTTCAATCGGCCTCCTCCCACACGTCACTTCAAGGATAACCACTCCATAGCTGAAGACGTCAGTTTTCTCAGTCGCTTTCCCATATTGAAGATACTCAGGTGCAAGGTATCCCATTGTTCCTGCAGTTAGAGTCGAAACCGGGCTCTTGTCATGATCCATGAGCTTCGCCAATCCAAAATCGCCCAATCTTGCATTGAAGTTCCCGTCCAGCAGTACGTTACCCGTCTTTATATCTCTGTGGATGACTTGCTGCTCACATTCCTGATGTAGATATGTCAGCACAGATGCCAATCCAACAGCAACATTGTATCTGTGAGACCAGTTTAACAAGCTAGCTTCTCCAGATTCTTGGTAAAGCAGCCTATCAAGGCTCCCGTTCGGCATGAAGTCATAAACGAGAAGCAATTCACCTTTCTCAACGCACCAACCTTGGAGCTGAACCAAATTCTTGTGCCTCAACCGAGCTATGATCGACAACTCGGCTAGGAACTCGGTCTTCCCTTCGTGAGAATGCTTCGATCTTTTAACCGCAGAAATGGTTCCGGATGAGATGAAAAAAGCTTTATAGACTGTCCCAAAAGCCCCATTGCCAACGATCCTACTGGAATGAAATCCTTTTGTGGCCGTCTTTAGTTCTCTATAACTAAACTCTCTAGGACCTGTCAAAAGCTCTGCCTTTATGCTTTTCTGAGCCCTAATCTTTCTCCATTTCTCAAGTGAAAAGAAACCAAACACAACAATCACGGCACAAAAGAAAGCCGGCCCGGCGATCCCGAGACCCAACCCGAGTCTATTGTGATGAGCATTACCAGAATCAGATATAGAAATATTAGGTGAGACAATCACAGAGCTATCAGAAACATTATGAGGGTTAAATCTAGGCCTAGCAGGTACAAACCCAGAAGTATTAAAACTCCAACTCTCAATCAAATGAAGCTCAGTACTCCCTTCAGTCGAACCGGAAAACCCGACATACATAACCTCCTTAAGATAGTTCGAAAGATCGACACCGACGTCGAGAAGCGCCTTGGAAGGTTTCAAACCAGAATTACTCAAGAAGACCCTCAGCCTATTTTCCTCATTCTTGTACTCAATCCAAGCCGTAATCGACTTCCCACTCTTGAGATTTACACCTTGAGAAGCAGGGTTAGCCGTCTTGATCGAAATCAAGCTCTCAATGTCGAAGCCAACATGGTGGGCATTAGGATCGTTGAAGACAGAATCAAGCCGTGTATCAAATTCAACCGCCAGAAACTTGTTCTTGGTCAATTGGGAAGAATTGACGAGACCCAAATACCCACCGGGGCTGCCGAGGGTTTGGTTATCGGGGGAGAGGAAAAAGGAAAGGCCATCGCCGGAGGAAGTGGGGTTAATGTTGGTGATGGAGAAAGAGAATCTTGTAGAGAAGGAGGCAGTGATGTTGGCATCGGCGTCGTAGAATCCGATTGGATTGTTGTAAATTACGGCGCCGGCGCTCGAGGAAGGAACTCCGAGCTCTTTGGTGAGGCCGATAACGCCATCGCGGAGGTGGGAATCGCCGAGGAGAGTGAGGTTTCTGATGTTGAAAGAACTGAAATCGAAGCCAATACACTCAGTTCTTGGAGGAGTGAAGAGAAACAGGAAAAGGGAAAAAACAAGGAGATTTTTTGGGGTCATTGA

mRNA sequence

ATGGATGACCTTCCTCATCGAAGGTCTTGCCGAGCTATCCGGGTTTGCACAGCTCAGTCCGACAACTGCTTCAATGATCTTGCCTTGAGAATGCAATCCCCAAACCCAATCTACCAGATTGACCATCTTTTGAGTACCTGGTTCTCTTTCAATCGGCCTCCTCCCACACGTCACTTCAAGGATAACCACTCCATAGCTGAAGACGTCAGTTTTCTCAGTCGCTTTCCCATATTGAAGATACTCAGGTGCAAGAGTCGAAACCGGGCTCTTGTCATGATCCATGAGCTTCGCCAATCCAAAATCGCCCAATCTTGCATTGAAGTTCCCGTCCAGCAGTACGTTACCCAAACCAAACACAACAATCACGGCACAAAAGAAAGCCGGCCCGGCGATCCCGAGACCCAACCCGAGTCTATTGTGATGAGCATTACCAGAATCAGATATAGAAATATTAGAGCTATCAGAAACATTATGAGGGTTAAATCTAGGCCTAGCAGGTACAAACCCAGAAGTATTAAAACTCCAACTCTCAATCAAATGAAGCTCAGTACTCCCTTCAGTCGAACCGGAAAACCCGACATACATAACCTCCTTAAGATAGTTCGAAAGATCGACACCGACGTCGAGAAGCGCCTTGGAAGGTTTCAAACCAGAATTACTCAAGAAGACCCTCAGCCTATTTTCCTCATTCTTGTACTCAATCCAAGCCGTAATCGACTTCCCACTCTTGAGATTTACACCTTGAGAAGCAGGGTTAGCCGTCTTGATCGAAATCAAGCTCTCAATGTCGAAGCCAACATGGTGGGCATTAGGATCGTTGAAGACAGAATCAAGCCGTGTATCAAATTCAACCGCCAGAAACTTGTTCTTGGTCAATTGGGAAGAATTGACGAGACCCAAATACCCACCGGGGCTGCCGAGGGTTTGGTTATCGGGGGAGAGGAAAAAGGAAAGGCCATCGCCGGAGGAAGTGGGGTTAATGTTGGTGATGGAGAAAGAGAATCTTGTAGAGAAGGAGGCAGTGATGTTGGCATCGGCGTCGTAGAATCCGATTGGATTGTTGTAAATTACGGCGCCGGCGCTCGAGGAAGGAACTCCGAGCTCTTTGGTGAGGCCGATAACGCCATCGCGGAGGTGGGAATCGCCGAGGAGAGTGAGGTTTCTGATGTTGAAAGAACTGAAATCGAAGCCAATACACTCAGTTCTTGGAGGAGTGAAGAGAAACAGGAAAAGGGAAAAAACAAGGAGATTTTTTGGGGTCATTGA

Coding sequence (CDS)

ATGGATGACCTTCCTCATCGAAGGTCTTGCCGAGCTATCCGGGTTTGCACAGCTCAGTCCGACAACTGCTTCAATGATCTTGCCTTGAGAATGCAATCCCCAAACCCAATCTACCAGATTGACCATCTTTTGAGTACCTGGTTCTCTTTCAATCGGCCTCCTCCCACACGTCACTTCAAGGATAACCACTCCATAGCTGAAGACGTCAGTTTTCTCAGTCGCTTTCCCATATTGAAGATACTCAGGTGCAAGAGTCGAAACCGGGCTCTTGTCATGATCCATGAGCTTCGCCAATCCAAAATCGCCCAATCTTGCATTGAAGTTCCCGTCCAGCAGTACGTTACCCAAACCAAACACAACAATCACGGCACAAAAGAAAGCCGGCCCGGCGATCCCGAGACCCAACCCGAGTCTATTGTGATGAGCATTACCAGAATCAGATATAGAAATATTAGAGCTATCAGAAACATTATGAGGGTTAAATCTAGGCCTAGCAGGTACAAACCCAGAAGTATTAAAACTCCAACTCTCAATCAAATGAAGCTCAGTACTCCCTTCAGTCGAACCGGAAAACCCGACATACATAACCTCCTTAAGATAGTTCGAAAGATCGACACCGACGTCGAGAAGCGCCTTGGAAGGTTTCAAACCAGAATTACTCAAGAAGACCCTCAGCCTATTTTCCTCATTCTTGTACTCAATCCAAGCCGTAATCGACTTCCCACTCTTGAGATTTACACCTTGAGAAGCAGGGTTAGCCGTCTTGATCGAAATCAAGCTCTCAATGTCGAAGCCAACATGGTGGGCATTAGGATCGTTGAAGACAGAATCAAGCCGTGTATCAAATTCAACCGCCAGAAACTTGTTCTTGGTCAATTGGGAAGAATTGACGAGACCCAAATACCCACCGGGGCTGCCGAGGGTTTGGTTATCGGGGGAGAGGAAAAAGGAAAGGCCATCGCCGGAGGAAGTGGGGTTAATGTTGGTGATGGAGAAAGAGAATCTTGTAGAGAAGGAGGCAGTGATGTTGGCATCGGCGTCGTAGAATCCGATTGGATTGTTGTAAATTACGGCGCCGGCGCTCGAGGAAGGAACTCCGAGCTCTTTGGTGAGGCCGATAACGCCATCGCGGAGGTGGGAATCGCCGAGGAGAGTGAGGTTTCTGATGTTGAAAGAACTGAAATCGAAGCCAATACACTCAGTTCTTGGAGGAGTGAAGAGAAACAGGAAAAGGGAAAAAACAAGGAGATTTTTTGGGGTCATTGA

Protein sequence

MDDLPHRRSCRAIRVCTAQSDNCFNDLALRMQSPNPIYQIDHLLSTWFSFNRPPPTRHFKDNHSIAEDVSFLSRFPILKILRCKSRNRALVMIHELRQSKIAQSCIEVPVQQYVTQTKHNNHGTKESRPGDPETQPESIVMSITRIRYRNIRAIRNIMRVKSRPSRYKPRSIKTPTLNQMKLSTPFSRTGKPDIHNLLKIVRKIDTDVEKRLGRFQTRITQEDPQPIFLILVLNPSRNRLPTLEIYTLRSRVSRLDRNQALNVEANMVGIRIVEDRIKPCIKFNRQKLVLGQLGRIDETQIPTGAAEGLVIGGEEKGKAIAGGSGVNVGDGERESCREGGSDVGIGVVESDWIVVNYGAGARGRNSELFGEADNAIAEVGIAEESEVSDVERTEIEANTLSSWRSEEKQEKGKNKEIFWGH

Homology

[Close]

BLAST of CaUC10G183540 vs. NCBI nr
Match: RDY09399.1 (hypothetical protein CR513_06229, partial [Mucuna pruriens])

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-16
Identity = 60/135 (44.44%), Postives = 74/135 (54.81%), Query Frame = 0


Query: 6   HRRSCRAIRVCTAQSD------------------NCFNDLALRMQSPNPIYQIDHLLSTW 65
           H R    IR+ T Q+                   +  NDL LR++SPNP+ +I HL    
Sbjct: 67  HGRPLSTIRISTGQTQEQQLPHFLLLKLPIQSLVSSLNDLPLRVKSPNPVNEIHHLRP-- 126

Query: 66  FSFNRPPPTRHFKDNHSIAEDVSFLSRFPILKILRCK--------SRNRALVMIHELRQS 115
            SFN PP T H K NH IAE++S +S   ILKIL CK          +RAL+MIHEL QS
Sbjct: 127 LSFNWPPCTSHLKHNHPIAENISLVSGLTILKILGCKVAHCSSSECGHRALIMIHELSQS 186

[Close]

BLAST of CaUC10G183540 vs. NCBI nr
Match: PRQ25681.1 (hypothetical protein RchiOBHm_Chr6g0286331 [Rosa chinensis])

HSP 1 Score: 81.3 bits (199), Expect = 2.3e-11
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 267 MVGIRIVEDRIKPCIKFNRQKLVLGQLGRIDETQIPTGAAEGLVIGGEEKGKAIAGGSGV 326
           MV IR+ E  I   I+F+  KLVLGQLG ++ETQI   AAE LV+GGE K  AIAGG GV
Sbjct: 1   MVVIRVGEVGILRGIEFDGDKLVLGQLGGVEETQIAARAAESLVVGGEGKRHAIAGGGGV 60

Query: 327 NV--GDGERESCREGGSDVGIGVVES 351
            V  G+GE E+  EGG DVG+GV E+
Sbjct: 61  KVGEGEGEGEAGGEGGGDVGVGVGEA 86

[Close]

BLAST of CaUC10G183540 vs. NCBI nr
Match: RDX61632.1 (hypothetical protein CR513_60121, partial [Mucuna pruriens])

HSP 1 Score: 76.6 bits (187), Expect = 5.6e-10
Identity = 47/106 (44.34%), Postives = 54/106 (50.94%), Query Frame = 0


Query: 6   HRRSCRAIRVCTAQ------------------SDNCFNDLALRMQSPNPIYQIDHLLSTW 65
           H R    IRVCT Q                  S +C ND  L +Q+PNPI+QI HL+   
Sbjct: 58  HGRPLSTIRVCTTQPQKQKLLHFPFLKLPIQPSISCLNDPPLGVQAPNPIHQIHHLV-LL 117

Query: 66  FSFNRPPPTRHFKDNHSIAEDVSFLSRFPILKILRCKSRNRALVMI 94
            S N PPPT H K +H IAE +S LS  P LKILR K     LV I
Sbjct: 118 LSLNWPPPTSHLKHHHPIAEHISLLSCHPTLKILRSKKLGSPLVRI 162

[Close]

BLAST of CaUC10G183540 vs. NCBI nr
Match: KAG6420854.1 (hypothetical protein SASPL_117396 [Salvia splendens])

HSP 1 Score: 73.6 bits (179), Expect = 4.7e-09
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 314 EEKGKAIAGGSGVNVGDGERESCREGGSDVGIGVVESDWIVVNYGAGARGRNSELFGEAD 373
           +E+G+A+A GS + V DGE E+  EGG DVG GV E D +V + GA A GR+ EL G+  
Sbjct: 631 QEEGEAVAKGSRIEVVDGEGEAGGEGGGDVGFGVEEGDGVVEDDGARAGGRDLELAGQPH 690

Query: 374 NAIAEVGIAEESEVSDVERTEIEANTLSSWRSEEKQE 411
           +A+++VG+AEE+EV+D E  E + + L      E QE
Sbjct: 691 DAVSDVGVAEEAEVADGEVREFQIHILRCVALAEDQE 727

[Close]

BLAST of CaUC10G183540 vs. NCBI nr
Match: KYP49786.1 (hypothetical protein KK1_028470, partial [Cajanus cajan])

HSP 1 Score: 57.0 bits (136), Expect = 4.6e-04
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 31 MQSPNPIYQIDHLLSTWFSFNRPPPTRHFKDNHSIAEDVSFLSRFPILKILRCK 85
          +Q+PNPI+QI HLL  +   N PP T HFKD+H IAE++S L     L+ILR K
Sbjct: 1  VQTPNPIHQIHHLLPLF--LNWPPTTCHFKDHHPIAENISLLICHTTLEILRSK 52

[Close]

BLAST of CaUC10G183540 vs. ExPASy TrEMBL
Match: A0A371I306 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_06229 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.6e-17
Identity = 60/135 (44.44%), Postives = 74/135 (54.81%), Query Frame = 0


Query: 6   HRRSCRAIRVCTAQSD------------------NCFNDLALRMQSPNPIYQIDHLLSTW 65
           H R    IR+ T Q+                   +  NDL LR++SPNP+ +I HL    
Sbjct: 67  HGRPLSTIRISTGQTQEQQLPHFLLLKLPIQSLVSSLNDLPLRVKSPNPVNEIHHLRP-- 126

Query: 66  FSFNRPPPTRHFKDNHSIAEDVSFLSRFPILKILRCK--------SRNRALVMIHELRQS 115
            SFN PP T H K NH IAE++S +S   ILKIL CK          +RAL+MIHEL QS
Sbjct: 127 LSFNWPPCTSHLKHNHPIAENISLVSGLTILKILGCKVAHCSSSECGHRALIMIHELSQS 186

[Close]

BLAST of CaUC10G183540 vs. ExPASy TrEMBL
Match: A0A2P6PUS7 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0286331 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-11
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 267 MVGIRIVEDRIKPCIKFNRQKLVLGQLGRIDETQIPTGAAEGLVIGGEEKGKAIAGGSGV 326
           MV IR+ E  I   I+F+  KLVLGQLG ++ETQI   AAE LV+GGE K  AIAGG GV
Sbjct: 1   MVVIRVGEVGILRGIEFDGDKLVLGQLGGVEETQIAARAAESLVVGGEGKRHAIAGGGGV 60

Query: 327 NV--GDGERESCREGGSDVGIGVVES 351
            V  G+GE E+  EGG DVG+GV E+
Sbjct: 61  KVGEGEGEGEAGGEGGGDVGVGVGEA 86

[Close]

BLAST of CaUC10G183540 vs. ExPASy TrEMBL
Match: A0A371E6H6 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_60121 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-10
Identity = 47/106 (44.34%), Postives = 54/106 (50.94%), Query Frame = 0


Query: 6   HRRSCRAIRVCTAQ------------------SDNCFNDLALRMQSPNPIYQIDHLLSTW 65
           H R    IRVCT Q                  S +C ND  L +Q+PNPI+QI HL+   
Sbjct: 58  HGRPLSTIRVCTTQPQKQKLLHFPFLKLPIQPSISCLNDPPLGVQAPNPIHQIHHLV-LL 117

Query: 66  FSFNRPPPTRHFKDNHSIAEDVSFLSRFPILKILRCKSRNRALVMI 94
            S N PPPT H K +H IAE +S LS  P LKILR K     LV I
Sbjct: 118 LSLNWPPPTSHLKHHHPIAEHISLLSCHPTLKILRSKKLGSPLVRI 162

[Close]

BLAST of CaUC10G183540 vs. ExPASy TrEMBL
Match: A0A151S4Q7 (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_028470 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-04
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 31 MQSPNPIYQIDHLLSTWFSFNRPPPTRHFKDNHSIAEDVSFLSRFPILKILRCK 85
          +Q+PNPI+QI HLL  +   N PP T HFKD+H IAE++S L     L+ILR K
Sbjct: 1  VQTPNPIHQIHHLLPLF--LNWPPTTCHFKDHHPIAENISLLICHTTLEILRSK 52

The following BLAST results are available for this feature:

BLAST of CaUC10G183540 vs. NCBI nr


Match Name	E-value	Identity	Description
RDY09399.1	1.4e-16	44.44	hypothetical protein CR513_06229, partial [Mucuna pruriens]	[more]
PRQ25681.1	2.3e-11	58.14	hypothetical protein RchiOBHm_Chr6g0286331 [Rosa chinensis]	[more]
RDX61632.1	5.6e-10	44.34	hypothetical protein CR513_60121, partial [Mucuna pruriens]	[more]
KAG6420854.1	4.7e-09	46.39	hypothetical protein SASPL_117396 [Salvia splendens]	[more]
KYP49786.1	4.6e-04	53.70	hypothetical protein KK1_028470, partial [Cajanus cajan]	[more]

BLAST of CaUC10G183540 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC10G183540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A371I306	6.6e-17	44.44	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_06229 P...	[more]
A0A2P6PUS7	1.1e-11	58.14	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0286331 PE=4...	[more]
A0A371E6H6	2.7e-10	44.34	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_60121 P...	[more]
A0A151S4Q7	2.2e-04	53.70	Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_028470 PE=4 S...	[more]

BLAST of CaUC10G183540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 401..421
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G183540.1	CaUC10G183540.1	mRNA