CaUC10G181800 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G181800
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	50S ribosomal protein L19
Location	Ciama_Chr10: 2819383 .. 2822944 (+)
RNA-Seq Expression	CaUC10G181800
Synteny	CaUC10G181800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAGATCAAACTCTTCACCATCGAAATGGATGAAATTGTCATAGTTCCTACGGTTTCAACAGCGTTGTCTGGATCATCCTCACACTTTTTTTGTCACTGGTAACGACATTGAAGGTGAGGAGGTAAACAAAAGAGTCCATTTTTTTTCTTGTAAGTTCTACTTTCGGGAGTTGAGTTCGTGGTTTTCATGATGATCCCATTCAATCTAGAATGATTTCATTGTATTTTTTTAGTAATTTACCCATCATAGAGTAACACATGATTTTGAGCATATATAGAAAACCTTTCTAACCAAGATTAAAACATAAACTTAACCAAATGTGTAAATTGATACACTTATTGAAGTTTGATATTTAAATTGATGACATTGAAAATTTAGGGTTCAAGTTGATAAACCTGTCAAATTTAGGATAAATAATGGTTTTTTTCCTTTTTTTAAGTCAGTGATGATTCAAATCTATAATCTAAAATTTGATATTAGGTTAAAAAATATGGAAATAAAGAAAAGGGAAATTATCTTAAATGACAAAACTGCTGAAAAATATTTACAACTAATAGCAAAATACACAGTCTATCTGTGATAGACAGCAATAGACTACTACATGTGTCTATCATGACACAAATAGTAGATTATCGACAGGGAAATTTTGCTATATTTATAAATATTTTTGTTCTTTTTGCTCTATTTGAGAAGAGCCCTCAAGAAAAATGGGTATAAAAGGGTCAACTTTGACATAGAAGGCAAAAAATAGAAAAAGGGAAAAAAAAAAAAAAAAAAATCTCTCTAGCTTGTCAAAGGGGTGTTTGGAATGTCGTAATGGGCCATAGATTTCAGAAGCCCAAGTTCAAGCCCACTCCATATTAAGGCCCGTTTTGACTGTTAGAATCCATTTCGTTTACGGATCCAGCCCACGACATAAAAACCAAAGATTTATTTGCCATTCAAGCCGGAGACCCGACCCGACCCGGAATTGACAGTGGATATTGGATAAGAGTTCATCACCATCTTCTCCAAAGAGAGAAAGAAGAAGAAGAAGAAGAAATACAGAGTCACTGCCATGATTCTCTCTCTTTATCACTAATCCTCTTCCATTAGAAGCTCCAATTCCTTCATCAATGGCCTCCAAGATTCTTCCTCAGGTACCTTCCTTCTCTCGCCTTTTTAATATTCTCTCTAAATTCCCCCTTCTCATCTTCGTCACATTTCTTGTTTCAAGGCCGTGATTTCTATTCCAAGAAACCCCAATCATTGTGCGCCGAGAAGGTTAGGGTTTTGTTCCGCAGTTTCTGTTACTCGTGTTTCGTTTTCTACTCTTTCCTCCAGCTCAATTGGCTGCCATTTTCACCACACCGTTGCGGCGCCGTTGAGACGAGCGTTTGTTGTGAGAGCTGAGGCGAATTCCGAAGCGGAGTCGGCGGTTGAAGAAGCTTCTGAAGCTGAAGTAGAAGCAGTAGTGGAGTCTAATGCTCAGCCTGAGGAGGAGAAGGCGCCGAGAAAGCCTCGTGTTAAGCTCGGAGATGTAATGGGGGTAATTGTTCTATCCATTCATCCCATTAAGGAACACAAACTTTTTTGCAGTTCTGAATTAAGGAGCACAGGATTTTTGCTACCGGAAGTGGAGTTCTGTACTGGTTGTTTCGAATTATTTTCAATGCTTCCAAAGAGTTGTTTAGCTCTGTTTAATAGCGATTTAGTATTTGTTTTTTAGCTTTTGAAAGTTATATTTGTTTGATTACCATGCTCTTACCATAGTTTTCAAAACTAAGCTCAAAATTTGAAAACACTGCTAAAAGAAGACAATAAAACAATGAAATCAATAGGTGTAAGCATTAAGGTTTATTTTCAAAAATAAAATATGAAATGGTTGTCAAATGGGGGCTAAATAACTGCTTAAGAGTCGAAGTTGATCTCTCCCCATAGAAACTCTTTAACAGTTTTGTGTAGTACAAGATATCAGCTACCAATGGTGAAAGTTTAGAATACAGGAATTTTCTCATCTACCACGACTAGATGGTATGTGACAGTTAAACATGTGATGTGATGATCTGAATTTGAATTTGATTTTAGTTTTGTCATTCTTTTCTCATCTGGGTAGATACTTAATAAGCGGGCGATTGAAGCGTCGGAGAAGGAGAGGCCGATACCAGACATTAGAACTGGTGACATTGTGGAGCTTAAACTGGTAAATTTCATTCTCAACCTCTATAGTCAAAACTCTTGTAAAAGTGTACAATTTTCTTAACTCATTTTAATAAAAATGTTATTGCTACTACAGGAAGTTCAAGAAAATAGGCGTAGACTTTCTGTTTATAGAGGAATTGTCATATCGAAACAAAATGCTGGCATCCACACTACGATTAGAATTCGCCGAATTATTGCTGGTGTTGGTGTGGAAATTGTTTTTCCGCTGTAAGTATTGAGTTCATTTTTCTTTCTTTCAAGGATCTAATATATGCTGTCAGTAGAATATGAGAGTGCTTAACTTCAATCTCGCTTGATGATGAACTCATTATTAAGCACATATAAGATTACTATTTCTCTTCCCAATTCTTTTAAAAGAGTTGTGAAGAAACTATCTGGATTTGGATGACCTGAGAACACTTGAACCTTCTTTACATATCTAGGTTTTCAAATTTCTAAAACGTAACTTATCTTCAGAATCTGTTGTTTATTTAAACATAAAATTGAGTTCTCCAGAACAATCTCACATGCTGATTCGGAAATAAAGCAATATTAGGTGGGGGTTTGGATGACTTGAGGAAACTTGAACCTTGTTACATATGTTAGTCTTAAATTCCTGTTTTCATTTTAGTAAAACCCCTCACCACATCCATCAAAATTAGATGAAATCAGAGCATTGGTCAATGATTTGAGAGCTCCCCTTGGTATGCTGAAAAGCACGCTGTGGCAAAACTATTTTAAAGGAAAGGAAACCAAAGAAAATTTTCTTTTGCTCACAAGTCACATGTTATCAAAATTCAAAACTTGATGAAATGATAAACATTGGATTAAAAAATAAAATGAAAAATTGGGTGCCTGATGAATATATCTATTACCTGCTTGGTTATTTGTATGAGTGTGGTTTTAATCTGAAGATGGATTTCTATTGCAGATACTCACCAAATATCAGAGAGATAAAAGTGGTGAGCCACAGAAAGGTGAGAAGGGCAAGGTTGTATTATTTGAGAGACAAACTGCCAAAACTCTCTACTTTCAAGTGAAACCCCCCAATGGCTTTCCTTGTTTTTTCCATCGACCATCAACAGGTTGTATCTTGCTATGATTGAAAAGTTCCTGTTTCTTTTTCATAGATGTGGACATTGTTCTTCTGTATTTATATTTTTCTCCTCCCACATTAGCATTTGCTAGTCTAATTATATATTTGAGCAACAGGGGTTTGATGAAAGCTACTGTCCTGGATTCACAATCACAACCTTGCTGATGCCATTACTTGGTTTCTTCTGAGTTGTTTTTCCTTACCTTTTAACTTTAATTTCATGAAGTCGGGCATCTCAGGATCTCTTGGCTTTGAACCATCAAATAGCCATAGTTCTACCCTC

mRNA sequence

TCAAGATCAAACTCTTCACCATCGAAATGGATGAAATTGTCATAGTTCCTACGCGTTGTCTGGATCATCCTCACACTTTTTTTGTCACTGGTAACGACATTGAAGAATCCATTTCGTTTACGGATCCAGCCCACGACATAAAAACCAAAGATTTATTTGCCATTCAAGCCGGAGACCCGACCCGACCCGGAATTGACAGTGGATATTGGATAAGAGTTCATCACCATCTTCTCCAAAGAGAGAAAGAAGAAGAAGAAGAAGAAATACAGAAAGCTCCAATTCCTTCATCAATGGCCTCCAAGATTCTTCCTCAGGTACCTTCCTTCTCTCGCCTTTTTAATATTCTCTCTAAATTCCCCCTTCTCATCTTCGTCACATTTCTTGCCGTGATTTCTATTCCAAGAAACCCCAATCATTGTGCGCCGAGAAGGTTAGGGTTTTGTTCCGCAGTTTCTGTTACTCGTGTTTCGTTTTCTACTCTTTCCTCCAGCTCAATTGGCTGCCATTTTCACCACACCGTTGCGGCGCCGTTGAGACGAGCGTTTGTTGTGAGAGCTGAGGCGAATTCCGAAGCGGAGTCGGCGGTTGAAGAAGCTTCTGAAGCTGAAGTAGAAGCAGTAGTGGAGTCTAATGCTCAGCCTGAGGAGGAGAAGGCGCCGAGAAAGCCTCGTGTTAAGCTCGGAGATGTAATGGGGATACTTAATAAGCGGGCGATTGAAGCGTCGGAGAAGGAGAGGCCGATACCAGACATTAGAACTGGTGACATTGTGGAGCTTAAACTGGAAGTTCAAGAAAATAGGCGTAGACTTTCTGTTTATAGAGGAATTGTCATATCGAAACAAAATGCTGGCATCCACACTACGATTAGAATTCGCCGAATTATTGCTGGTGTTGGTGTGGAAATTATACTCACCAAATATCAGAGAGATAAAAGTGGTGAGCCACAGAAAGGTGAGAAGGGCAAGGTTGTATTATTTGAGAGACAAACTGCCAAAACTCTCTACTTTCAATCGGGCATCTCAGGATCTCTTGGCTTTGAACCATCAAATAGCCATAGTTCTACCCTC

Coding sequence (CDS)

ATGGATGAAATTGTCATAGTTCCTACGCGTTGTCTGGATCATCCTCACACTTTTTTTGTCACTGGTAACGACATTGAAGAATCCATTTCGTTTACGGATCCAGCCCACGACATAAAAACCAAAGATTTATTTGCCATTCAAGCCGGAGACCCGACCCGACCCGGAATTGACAGTGGATATTGGATAAGAGTTCATCACCATCTTCTCCAAAGAGAGAAAGAAGAAGAAGAAGAAGAAATACAGAAAGCTCCAATTCCTTCATCAATGGCCTCCAAGATTCTTCCTCAGGTACCTTCCTTCTCTCGCCTTTTTAATATTCTCTCTAAATTCCCCCTTCTCATCTTCGTCACATTTCTTGCCGTGATTTCTATTCCAAGAAACCCCAATCATTGTGCGCCGAGAAGGTTAGGGTTTTGTTCCGCAGTTTCTGTTACTCGTGTTTCGTTTTCTACTCTTTCCTCCAGCTCAATTGGCTGCCATTTTCACCACACCGTTGCGGCGCCGTTGAGACGAGCGTTTGTTGTGAGAGCTGAGGCGAATTCCGAAGCGGAGTCGGCGGTTGAAGAAGCTTCTGAAGCTGAAGTAGAAGCAGTAGTGGAGTCTAATGCTCAGCCTGAGGAGGAGAAGGCGCCGAGAAAGCCTCGTGTTAAGCTCGGAGATGTAATGGGGATACTTAATAAGCGGGCGATTGAAGCGTCGGAGAAGGAGAGGCCGATACCAGACATTAGAACTGGTGACATTGTGGAGCTTAAACTGGAAGTTCAAGAAAATAGGCGTAGACTTTCTGTTTATAGAGGAATTGTCATATCGAAACAAAATGCTGGCATCCACACTACGATTAGAATTCGCCGAATTATTGCTGGTGTTGGTGTGGAAATTATACTCACCAAATATCAGAGAGATAAAAGTGGTGAGCCACAGAAAGGTGAGAAGGGCAAGGTTGTATTATTTGAGAGACAAACTGCCAAAACTCTCTACTTTCAATCGGGCATCTCAGGATCTCTTGGCTTTGAACCATCAAATAGCCATAGTTCTACCCTC

Protein sequence

MDEIVIVPTRCLDHPHTFFVTGNDIEESISFTDPAHDIKTKDLFAIQAGDPTRPGIDSGYWIRVHHHLLQREKEEEEEEIQKAPIPSSMASKILPQVPSFSRLFNILSKFPLLIFVTFLAVISIPRNPNHCAPRRLGFCSAVSVTRVSFSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESAVEEASEAEVEAVVESNAQPEEEKAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIILTKYQRDKSGEPQKGEKGKVVLFERQTAKTLYFQSGISGSLGFEPSNSHSSTL

Homology

[Close]

BLAST of CaUC10G181800 vs. NCBI nr
Match: XP_004147231.1 (50S ribosomal protein L19-1, chloroplastic [Cucumis sativus] >KGN55828.1 hypothetical protein Csa_011101 [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 4.6e-79
Identity = 172/210 (81.90%), Postives = 175/210 (83.33%), Query Frame = 0


Query: 89  MASKILPQVPSFSRLFNILSKFPLLIFVTFLAVISIPRNPNHCAPRRLGFCSAVSVTRVS 148
           MASKILPQ                       AVISIPRNPN CAPRRLGFCSAVS TRVS
Sbjct: 1   MASKILPQ-----------------------AVISIPRNPNQCAPRRLGFCSAVSGTRVS 60

Query: 149 FSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESAVEEASEAEVEAVVESNAQPEEE 208
           FSTLSSSSIG HFHHTVAAPLRRAFVVRAEAN EA+SA EEA EAEVEA VES+AQPEEE
Sbjct: 61  FSTLSSSSIGSHFHHTVAAPLRRAFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEE 120

Query: 209 KAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 268
           K  RKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV
Sbjct: 121 KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 180

Query: 269 ISKQNAGIHTTIRIRRIIAGVGVEIILTKY 299
           ISKQNAGIHTTIRIRRIIAGVGVEI+   Y
Sbjct: 181 ISKQNAGIHTTIRIRRIIAGVGVEIVFPLY 187

[Close]

BLAST of CaUC10G181800 vs. NCBI nr
Match: XP_038906353.1 (50S ribosomal protein L19, chloroplastic [Benincasa hispida])

HSP 1 Score: 303.5 bits (776), Expect = 2.3e-78
Identity = 169/210 (80.48%), Postives = 175/210 (83.33%), Query Frame = 0


Query: 89  MASKILPQVPSFSRLFNILSKFPLLIFVTFLAVISIPRNPNHCAPRRLGFCSAVSVTRVS 148
           MASKILPQ                       AVISIPRNPN CAPRRLGFCSAVS TRVS
Sbjct: 1   MASKILPQ-----------------------AVISIPRNPNQCAPRRLGFCSAVSGTRVS 60

Query: 149 FSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESAVEEASEAEVEAVVESNAQPEEE 208
           FSTLSSSSIG HFHHT+AAPLRR FVVRAEANS+ ESAVEEA EAE+EAV ES+A P+EE
Sbjct: 61  FSTLSSSSIGSHFHHTIAAPLRRGFVVRAEANSDEESAVEEAPEAELEAVAESDALPQEE 120

Query: 209 KAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 268
           K PRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV
Sbjct: 121 KPPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 180

Query: 269 ISKQNAGIHTTIRIRRIIAGVGVEIILTKY 299
           ISKQNAGIHTTIRIRRIIAGVGVEI+   Y
Sbjct: 181 ISKQNAGIHTTIRIRRIIAGVGVEIVFPLY 187

[Close]

BLAST of CaUC10G181800 vs. NCBI nr
Match: XP_008448785.1 (PREDICTED: 50S ribosomal protein L19, chloroplastic [Cucumis melo])

HSP 1 Score: 299.7 bits (766), Expect = 3.3e-77
Identity = 169/210 (80.48%), Postives = 173/210 (82.38%), Query Frame = 0


Query: 89  MASKILPQVPSFSRLFNILSKFPLLIFVTFLAVISIPRNPNHCAPRRLGFCSAVSVTRVS 148
           MASKILPQ                       AVISIPRNPN C PRRLGFCSAVS TRVS
Sbjct: 1   MASKILPQ-----------------------AVISIPRNPNQCPPRRLGFCSAVSGTRVS 60

Query: 149 FSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESAVEEASEAEVEAVVESNAQPEEE 208
           FSTLSSSSIG HF HTV+APL+RAFVVRAEAN EAESA EEA EAEVEA VES+AQPEEE
Sbjct: 61  FSTLSSSSIGSHFRHTVSAPLKRAFVVRAEANPEAESAAEEAPEAEVEAAVESDAQPEEE 120

Query: 209 KAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 268
           K  RKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV
Sbjct: 121 KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 180

Query: 269 ISKQNAGIHTTIRIRRIIAGVGVEIILTKY 299
           ISKQNAGIHTTIRIRRIIAGVGVEI+   Y
Sbjct: 181 ISKQNAGIHTTIRIRRIIAGVGVEIVFPLY 187

[Close]

BLAST of CaUC10G181800 vs. NCBI nr
Match: KAA0041053.1 (50S ribosomal protein L19 [Cucumis melo var. makuwa] >TYK12063.1 50S ribosomal protein L19 [Cucumis melo var. makuwa])

HSP 1 Score: 299.7 bits (766), Expect = 3.3e-77
Identity = 169/210 (80.48%), Postives = 173/210 (82.38%), Query Frame = 0


Query: 89  MASKILPQVPSFSRLFNILSKFPLLIFVTFLAVISIPRNPNHCAPRRLGFCSAVSVTRVS 148
           MASKILPQ                       AVISIPRNPN C PRRLGFCSAVS TRVS
Sbjct: 1   MASKILPQ-----------------------AVISIPRNPNQCPPRRLGFCSAVSGTRVS 60

Query: 149 FSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESAVEEASEAEVEAVVESNAQPEEE 208
           FSTLSSSSIG HF HTV+APL+RAFVVRAEAN EAESA EEA EAEVEA VES+AQPEEE
Sbjct: 61  FSTLSSSSIGSHFRHTVSAPLKRAFVVRAEANPEAESAAEEAPEAEVEAAVESDAQPEEE 120

Query: 209 KAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 268
           K  RKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV
Sbjct: 121 KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 180

Query: 269 ISKQNAGIHTTIRIRRIIAGVGVEIILTKY 299
           ISKQNAGIHTTIRIRRIIAGVGVEI+   Y
Sbjct: 181 ISKQNAGIHTTIRIRRIIAGVGVEIVFPLY 187

[Close]

BLAST of CaUC10G181800 vs. NCBI nr
Match: XP_022938903.1 (50S ribosomal protein L19-1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 285.4 bits (729), Expect = 6.5e-73
Identity = 158/210 (75.24%), Postives = 169/210 (80.48%), Query Frame = 0


Query: 89  MASKILPQVPSFSRLFNILSKFPLLIFVTFLAVISIPRNPNHCAPRRLGFCSAVSVTRVS 148
           MASKILPQ                       AV SIPR PN CAPR+LGFCSA+   R+S
Sbjct: 1   MASKILPQ-----------------------AVFSIPRTPNQCAPRKLGFCSAIYGNRLS 60

Query: 149 FSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESAVEEASEAEVEAVVESNAQPEEE 208
           FSTLSSSSIGCHFHH VA P++R FVVRAEANSEAE+A EEA EAEVE VVES+AQPEE 
Sbjct: 61  FSTLSSSSIGCHFHHAVAGPVKRTFVVRAEANSEAEAA-EEAPEAEVEGVVESDAQPEEV 120

Query: 209 KAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 268
           K PRKPRVKLGDVMGILNKRA+EASEKERPIPD+RTGDIVE+KLEV ENRRRLSVYRGIV
Sbjct: 121 KPPRKPRVKLGDVMGILNKRAVEASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIV 180

Query: 269 ISKQNAGIHTTIRIRRIIAGVGVEIILTKY 299
           ISKQNAGIHTTIRIRRIIAGVGVEI+   Y
Sbjct: 181 ISKQNAGIHTTIRIRRIIAGVGVEIVFPLY 186

[Close]

BLAST of CaUC10G181800 vs. ExPASy Swiss-Prot
Match: Q8W463 (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g17560 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 8.9e-41
Identity = 103/185 (55.68%), Postives = 131/185 (70.81%), Query Frame = 0


Query: 120 AVISIPRNPNHCAPRRLGFCSAVSV-----TRVSFSTLSSSSIGCHFHHTVAAPLRRAFV 179
           A+  IPRNP   + + LGF S +S      +R+S S LS +  G  F  ++   +R  F+
Sbjct: 11  ALHMIPRNPTQ-SSKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRNEFI 70

Query: 180 VRA-EANSEAESAVEEASEAEVEAVVESNAQPEEEKAPRKPRVKLGDVMGILNKRAIEAS 239
           VRA E N+EAES    A  A+ E  VE   +  E K  RKPR+KLGDVMGILN++AIE +
Sbjct: 71  VRAEEGNTEAESEEFVAEIADTEGNVE---EVVEAKPTRKPRIKLGDVMGILNQKAIEVA 130

Query: 240 EKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEI 299
           EK RP+P+IRTGDIVE+KLEV EN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG+GVEI
Sbjct: 131 EKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEI 190

[Close]

BLAST of CaUC10G181800 vs. ExPASy Swiss-Prot
Match: P82413 (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 PE=1 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 7.0e-38
Identity = 106/223 (47.53%), Postives = 139/223 (62.33%), Query Frame = 0


Query: 89  MASKILPQVPSFSRLFNILSKFPLLIFVTFLAVISIPRNPN-HCAP--RRLGF------- 148
           MASK+LPQ                       A++ IP N +  C P  ++LGF       
Sbjct: 1   MASKVLPQ-----------------------ALLVIPSNHSLQCPPLKKQLGFPIDSNRR 60

Query: 149 --CSAVSVTRVSFSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESAVEE-ASEAEV 208
              S+   + +  S  SS+    +F    + P R +FVVR+EA   +++  E  A  AE 
Sbjct: 61  FSLSSNCRSNLMVSRASSNLFSSNFSSIFSFPARNSFVVRSEAEDSSDAPAESVAVVAEE 120

Query: 209 EAVVESNAQPEEEKAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQ 268
           E  VES A+  EE+ PR+ RVKLGD+MGILNK+A+ A+E+ RP+P IRTGDIV+++LEV 
Sbjct: 121 ELPVESEAE-AEERPPRQQRVKLGDIMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVP 180

Query: 269 ENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIILTKY 299
           EN+RRLSVY+GIVIS+QNAGIHTTIRIRRIIAGVGVEI+   Y
Sbjct: 181 ENKRRLSVYKGIVISRQNAGIHTTIRIRRIIAGVGVEIVFPLY 199

[Close]

BLAST of CaUC10G181800 vs. ExPASy Swiss-Prot
Match: Q8RXX5 (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g47190 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-37
Identity = 97/190 (51.05%), Postives = 126/190 (66.32%), Query Frame = 0


Query: 120 AVISIPRNPNHCA---------PRRLGFCSAVSVTRVSFSTLSSSSIGCHFHHTVAAPLR 179
           A+  IPR P+  +         PR     S +SV+RV F   SSS+ G      + +  R
Sbjct: 11  ALHMIPRTPSFSSKNLGVSSILPRASSVNSRLSVSRV-FLNHSSSNFG----FAIDSKKR 70

Query: 180 RAFVVRAEANS--EAESAVEEASEAEVEAVVESNAQPEEEKAPRKPRVKLGDVMGILNKR 239
           + F+ +AE ++  E E+ VE A E E E   E+    EE K P K RVKLGD+MG+LNK+
Sbjct: 71  KEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDIMGLLNKK 130

Query: 240 AIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAG 299
           AIE +E  RP+P +RTGDIVE+KLEV EN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG
Sbjct: 131 AIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAG 190

[Close]

BLAST of CaUC10G181800 vs. ExPASy Swiss-Prot
Match: B8HT34 (50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rplS PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 9.0e-09
Identity = 31/66 (46.97%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 228 RAIEASEKERPIPDIRTGDIVELKLEVQE-NRRRLSVYRGIVISKQNAGIHTTIRIRRII 287
           R++EA + +  +P+I  GD V++ + +QE N+ R   Y GIVI+K+N+GI+ TI +RRI 
Sbjct: 8   RSLEAEQLKSNLPEIHVGDTVKVGVIIQEGNKERTQPYEGIVIAKRNSGINATITVRRIF 67

Query: 288 AGVGVE 293
            GVGVE
Sbjct: 68  QGVGVE 73

[Close]

BLAST of CaUC10G181800 vs. ExPASy Swiss-Prot
Match: Q46GU7 (50S ribosomal protein L19 OS=Prochlorococcus marinus (strain NATL2A) OX=59920 GN=rplS PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.9e-08
Identity = 39/114 (34.21%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 188 EEASEAEVEAVVESNAQPEEEKAPRKPRVKLGDVMGILNK------RAIEASEKERPIPD 247
           +E S  EV+   ESNA  + E          G  + I N       +  E ++  + +PD
Sbjct: 6   KEPSSQEVKIEDESNASEDSEVKTASETKSKGKKISIQNLSPAEIIKTFEDAQLGKDLPD 65

Query: 248 IRTGDIVELKLEVQE-NRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEII 295
           +  GD V + + + E N+ R+  Y G+VI+K++ GIH TI +RRI  G+GVE I
Sbjct: 66  VYVGDTVRVGVRISEGNKERVQPYEGVVIAKRHGGIHQTITVRRIFQGIGVERI 119

[Close]

BLAST of CaUC10G181800 vs. ExPASy TrEMBL
Match: A0A0A0L237 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017220 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 2.2e-79
Identity = 172/210 (81.90%), Postives = 175/210 (83.33%), Query Frame = 0


Query: 89  MASKILPQVPSFSRLFNILSKFPLLIFVTFLAVISIPRNPNHCAPRRLGFCSAVSVTRVS 148
           MASKILPQ                       AVISIPRNPN CAPRRLGFCSAVS TRVS
Sbjct: 1   MASKILPQ-----------------------AVISIPRNPNQCAPRRLGFCSAVSGTRVS 60

Query: 149 FSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESAVEEASEAEVEAVVESNAQPEEE 208
           FSTLSSSSIG HFHHTVAAPLRRAFVVRAEAN EA+SA EEA EAEVEA VES+AQPEEE
Sbjct: 61  FSTLSSSSIGSHFHHTVAAPLRRAFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEE 120

Query: 209 KAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 268
           K  RKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV
Sbjct: 121 KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 180

Query: 269 ISKQNAGIHTTIRIRRIIAGVGVEIILTKY 299
           ISKQNAGIHTTIRIRRIIAGVGVEI+   Y
Sbjct: 181 ISKQNAGIHTTIRIRRIIAGVGVEIVFPLY 187

[Close]

BLAST of CaUC10G181800 vs. ExPASy TrEMBL
Match: A0A5D3CJI4 (50S ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00780 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77
Identity = 169/210 (80.48%), Postives = 173/210 (82.38%), Query Frame = 0


Query: 89  MASKILPQVPSFSRLFNILSKFPLLIFVTFLAVISIPRNPNHCAPRRLGFCSAVSVTRVS 148
           MASKILPQ                       AVISIPRNPN C PRRLGFCSAVS TRVS
Sbjct: 1   MASKILPQ-----------------------AVISIPRNPNQCPPRRLGFCSAVSGTRVS 60

Query: 149 FSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESAVEEASEAEVEAVVESNAQPEEE 208
           FSTLSSSSIG HF HTV+APL+RAFVVRAEAN EAESA EEA EAEVEA VES+AQPEEE
Sbjct: 61  FSTLSSSSIGSHFRHTVSAPLKRAFVVRAEANPEAESAAEEAPEAEVEAAVESDAQPEEE 120

Query: 209 KAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 268
           K  RKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV
Sbjct: 121 KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 180

Query: 269 ISKQNAGIHTTIRIRRIIAGVGVEIILTKY 299
           ISKQNAGIHTTIRIRRIIAGVGVEI+   Y
Sbjct: 181 ISKQNAGIHTTIRIRRIIAGVGVEIVFPLY 187

[Close]

BLAST of CaUC10G181800 vs. ExPASy TrEMBL
Match: A0A1S3BJX1 (50S ribosomal protein L19, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490850 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77
Identity = 169/210 (80.48%), Postives = 173/210 (82.38%), Query Frame = 0


Query: 89  MASKILPQVPSFSRLFNILSKFPLLIFVTFLAVISIPRNPNHCAPRRLGFCSAVSVTRVS 148
           MASKILPQ                       AVISIPRNPN C PRRLGFCSAVS TRVS
Sbjct: 1   MASKILPQ-----------------------AVISIPRNPNQCPPRRLGFCSAVSGTRVS 60

Query: 149 FSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESAVEEASEAEVEAVVESNAQPEEE 208
           FSTLSSSSIG HF HTV+APL+RAFVVRAEAN EAESA EEA EAEVEA VES+AQPEEE
Sbjct: 61  FSTLSSSSIGSHFRHTVSAPLKRAFVVRAEANPEAESAAEEAPEAEVEAAVESDAQPEEE 120

Query: 209 KAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 268
           K  RKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV
Sbjct: 121 KPSRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 180

Query: 269 ISKQNAGIHTTIRIRRIIAGVGVEIILTKY 299
           ISKQNAGIHTTIRIRRIIAGVGVEI+   Y
Sbjct: 181 ISKQNAGIHTTIRIRRIIAGVGVEIVFPLY 187

[Close]

BLAST of CaUC10G181800 vs. ExPASy TrEMBL
Match: A0A6J1FK79 (50S ribosomal protein L19-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444973 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 3.1e-73
Identity = 158/210 (75.24%), Postives = 169/210 (80.48%), Query Frame = 0


Query: 89  MASKILPQVPSFSRLFNILSKFPLLIFVTFLAVISIPRNPNHCAPRRLGFCSAVSVTRVS 148
           MASKILPQ                       AV SIPR PN CAPR+LGFCSA+   R+S
Sbjct: 1   MASKILPQ-----------------------AVFSIPRTPNQCAPRKLGFCSAIYGNRLS 60

Query: 149 FSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESAVEEASEAEVEAVVESNAQPEEE 208
           FSTLSSSSIGCHFHH VA P++R FVVRAEANSEAE+A EEA EAEVE VVES+AQPEE 
Sbjct: 61  FSTLSSSSIGCHFHHAVAGPVKRTFVVRAEANSEAEAA-EEAPEAEVEGVVESDAQPEEV 120

Query: 209 KAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIV 268
           K PRKPRVKLGDVMGILNKRA+EASEKERPIPD+RTGDIVE+KLEV ENRRRLSVYRGIV
Sbjct: 121 KPPRKPRVKLGDVMGILNKRAVEASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIV 180

Query: 269 ISKQNAGIHTTIRIRRIIAGVGVEIILTKY 299
           ISKQNAGIHTTIRIRRIIAGVGVEI+   Y
Sbjct: 181 ISKQNAGIHTTIRIRRIIAGVGVEIVFPLY 186

[Close]

BLAST of CaUC10G181800 vs. ExPASy TrEMBL
Match: A0A6J1HJM2 (50S ribosomal protein L19-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111465106 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.7e-71
Identity = 156/225 (69.33%), Postives = 173/225 (76.89%), Query Frame = 0


Query: 89  MASKILPQVPSFSRLFNILSKFPLLIFVTFLAVISIPRNPNHCAPRRLGFCSAVSVTRVS 148
           MA+KILPQ                       AVIS+PR PN CAPRRLGFCSA+S TR+S
Sbjct: 1   MATKILPQ-----------------------AVISVPRTPNQCAPRRLGFCSAISATRLS 60

Query: 149 FSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESA---------VEEASEAEVEAVV 208
           FSTLSSSSIGCHFHHTV+AP++RAFVVRAEA+SEAESA         V EA +  VEAV 
Sbjct: 61  FSTLSSSSIGCHFHHTVSAPMKRAFVVRAEADSEAESASDEENVDKTVGEAPQGVVEAVA 120

Query: 209 ESNAQPEEEKAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRR 268
           ES+ QPE EK PRKPRVKLGDV+GILNKRA+EASEK RPIPDIRTGDIVE+KLEV ENRR
Sbjct: 121 ESDGQPEAEKPPRKPRVKLGDVLGILNKRAVEASEKARPIPDIRTGDIVEVKLEVPENRR 180

Query: 269 RLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIILTKYQRDKSG 305
           RLSVYRGIV+SKQNAGIHTTIRIR+IIAGVGVEI+   Y  +  G
Sbjct: 181 RLSVYRGIVMSKQNAGIHTTIRIRKIIAGVGVEIVFPLYSPNIKG 202

[Close]

BLAST of CaUC10G181800 vs. TAIR 10
Match: AT4G17560.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 169.1 bits (427), Expect = 6.3e-42
Identity = 103/185 (55.68%), Postives = 131/185 (70.81%), Query Frame = 0


Query: 120 AVISIPRNPNHCAPRRLGFCSAVSV-----TRVSFSTLSSSSIGCHFHHTVAAPLRRAFV 179
           A+  IPRNP   + + LGF S +S      +R+S S LS +  G  F  ++   +R  F+
Sbjct: 11  ALHMIPRNPTQ-SSKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRNEFI 70

Query: 180 VRA-EANSEAESAVEEASEAEVEAVVESNAQPEEEKAPRKPRVKLGDVMGILNKRAIEAS 239
           VRA E N+EAES    A  A+ E  VE   +  E K  RKPR+KLGDVMGILN++AIE +
Sbjct: 71  VRAEEGNTEAESEEFVAEIADTEGNVE---EVVEAKPTRKPRIKLGDVMGILNQKAIEVA 130

Query: 240 EKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEI 299
           EK RP+P+IRTGDIVE+KLEV EN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG+GVEI
Sbjct: 131 EKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEI 190

[Close]

BLAST of CaUC10G181800 vs. TAIR 10
Match: AT5G47190.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 158.7 bits (400), Expect = 8.5e-39
Identity = 97/190 (51.05%), Postives = 126/190 (66.32%), Query Frame = 0


Query: 120 AVISIPRNPNHCA---------PRRLGFCSAVSVTRVSFSTLSSSSIGCHFHHTVAAPLR 179
           A+  IPR P+  +         PR     S +SV+RV F   SSS+ G      + +  R
Sbjct: 11  ALHMIPRTPSFSSKNLGVSSILPRASSVNSRLSVSRV-FLNHSSSNFG----FAIDSKKR 70

Query: 180 RAFVVRAEANS--EAESAVEEASEAEVEAVVESNAQPEEEKAPRKPRVKLGDVMGILNKR 239
           + F+ +AE ++  E E+ VE A E E E   E+    EE K P K RVKLGD+MG+LNK+
Sbjct: 71  KEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDIMGLLNKK 130

Query: 240 AIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAG 299
           AIE +E  RP+P +RTGDIVE+KLEV EN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG
Sbjct: 131 AIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAG 190

[Close]

BLAST of CaUC10G181800 vs. TAIR 10
Match: AT5G11750.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 85.5 bits (210), Expect = 9.2e-17
Identity = 39/78 (50.00%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 221 VMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTI 280
           +M I++K A+E     R IP+I+ G IV+LK+EV EN+RR+S+ +G+VI+++NAG+++T 
Sbjct: 119 IMQIVDKEAVEEVRNLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTF 178

Query: 281 RIRRIIAGVGVEIILTKY 299
           RIRR++AGVGVE +   Y
Sbjct: 179 RIRRLVAGVGVESMFPLY 196

[Close]

BLAST of CaUC10G181800 vs. TAIR 10
Match: AT1G24240.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 85.1 bits (209), Expect = 1.2e-16
Identity = 39/78 (50.00%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 221 VMGILNKRAIEASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTI 280
           +M I++K A+E     R IP+I+ G IV+LK+EV EN+RR+S+ +G+VI+++NAG+++T 
Sbjct: 112 IMQIVDKEAVEEVRTLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTF 171

Query: 281 RIRRIIAGVGVEIILTKY 299
           RIRR++AGVGVE +   Y
Sbjct: 172 RIRRLVAGVGVESMFPLY 189

[Close]

BLAST of CaUC10G181800 vs. TAIR 10
Match: AT4G11630.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-14
Identity = 55/165 (33.33%), Postives = 93/165 (56.36%), Query Frame = 0


Query: 134 RRLGFCSAVSVTRVSFSTLSSSSIGCHFHHTVAAPLRRAFVVRAEANSEAESAVEEASEA 193
           R+LGF S  S    ++   S  + G     + A P +         ++  +S+V+ + E+
Sbjct: 39  RKLGFDSCPSSRAATYLISSLKNAG---FSSSAIPKQNFTYASRCFSTTGDSSVQGSPES 98

Query: 194 EVEAVVESNAQPEEEKAPRKPRVKLGDVMGILNKRAIEASEKERPIPDIRTGDIVELKLE 253
           +          P+  K  R  +     +M I++K A+E     R IP+I+ G IV+LK+E
Sbjct: 99  DC-------VVPQRIKFKRLDKT-AKHIMQIVDKEAVEEVRSLREIPEIKPGYIVQLKVE 158

Query: 254 VQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIILTKY 299
           V EN+RR+S+ +G+VI+++NAG+++T RIRR++AGVGVE +   Y
Sbjct: 159 VPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLY 192

The following BLAST results are available for this feature:

BLAST of CaUC10G181800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147231.1	4.6e-79	81.90	50S ribosomal protein L19-1, chloroplastic [Cucumis sativus] >KGN55828.1 hypothe...	[more]
XP_038906353.1	2.3e-78	80.48	50S ribosomal protein L19, chloroplastic [Benincasa hispida]	[more]
XP_008448785.1	3.3e-77	80.48	PREDICTED: 50S ribosomal protein L19, chloroplastic [Cucumis melo]	[more]
KAA0041053.1	3.3e-77	80.48	50S ribosomal protein L19 [Cucumis melo var. makuwa] >TYK12063.1 50S ribosomal p...	[more]
XP_022938903.1	6.5e-73	75.24	50S ribosomal protein L19-1, chloroplastic [Cucurbita moschata]	[more]

BLAST of CaUC10G181800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W463	8.9e-41	55.68	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
P82413	7.0e-38	47.53	50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 P...	[more]
Q8RXX5	1.2e-37	51.05	50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
B8HT34	9.0e-09	46.97	50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=39...	[more]
Q46GU7	9.9e-08	34.21	50S ribosomal protein L19 OS=Prochlorococcus marinus (strain NATL2A) OX=59920 GN...	[more]

BLAST of CaUC10G181800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L237	2.2e-79	81.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017220 PE=3 SV=1	[more]
A0A5D3CJI4	1.6e-77	80.48	50S ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BJX1	1.6e-77	80.48	50S ribosomal protein L19, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490850...	[more]
A0A6J1FK79	3.1e-73	75.24	50S ribosomal protein L19-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HJM2	1.7e-71	69.33	50S ribosomal protein L19-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CaUC10G181800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17560.1	6.3e-42	55.68	Ribosomal protein L19 family protein	[more]
AT5G47190.1	8.5e-39	51.05	Ribosomal protein L19 family protein	[more]
AT5G11750.1	9.2e-17	50.00	Ribosomal protein L19 family protein	[more]
AT1G24240.1	1.2e-16	50.00	Ribosomal protein L19 family protein	[more]
AT4G11630.1	1.9e-14	33.33	Ribosomal protein L19 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 176..196
None	No IPR available	PANTHER	PTHR15680:SF10	50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED	coord: 118..298
IPR038657	Ribosomal protein L19 superfamily	GENE3D	2.30.30.790		coord: 215..300 e-value: 7.8E-13 score: 50.3
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 229..296 e-value: 6.7E-15 score: 55.0
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 118..298
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 221..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC10G181800.1	CaUC10G181800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome