
CaUC10G181540 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGTAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATTCGTTCCCGGGCCTTGTACACACCGCCCGTCACACTATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTTTCAGGGAGAGCTAATGCTTGTTGGGTATTTTGGTTTGACACTGCTTCACACCCAAAAAGAAGCGAGCTACGTCTGAGTTAAACTTGGAGATGGAAGTCTTCTTTCGTTTCTCGACGGTGAAGTAAGACTAAGCTCATGAGCTTATTATCCTAGGTCGGAACAAGTTGATAGGATCCCCTTTTTTACGTCCCCGTGTCCCTCCCGTGTGGCGACATGGGGGCGAAAAAAGGAAAGAGAGGGATGGGGTTTCTCTCGCTTTTGGCATAGCGGGCCCCCAGCGGGAGGCCCGCACGACGGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGTTTGAACCGGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGTCTGGAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGATTCTCTCCCAATTGGTTGGACCGTAGGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA ATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGCGGGCCCCCAGCGGGAGGCCCGCACGACGGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA ATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGCGGGCCCCCAGCGGGAGGCCCGCACGACGGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA MTSSHHAPYALGDTRATMAGTKGRDPARRAPSGRPARRAISSVVERAPDNCVVVPGLPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGPGDLKKDLRVSRVGPGGFLNAFFFLLIGVISQRLAMVRKKGGTSTLGERSTTESCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGLDV Homology
BLAST of CaUC10G181540 vs. NCBI nr
Match: TYK08512.1 (putative chloroplast RF68 [Cucumis melo var. makuwa]) HSP 1 Score: 197.6 bits (501), Expect = 1.1e-46 Identity = 100/126 (79.37%), Postives = 106/126 (84.13%), Query Frame = 0
BLAST of CaUC10G181540 vs. NCBI nr
Match: KAA0050839.1 (putative chloroplast RF68 [Cucumis melo var. makuwa]) HSP 1 Score: 191.4 bits (485), Expect = 7.6e-45 Identity = 97/122 (79.51%), Postives = 102/122 (83.61%), Query Frame = 0
BLAST of CaUC10G181540 vs. NCBI nr
Match: KAG6790056.1 (hypothetical protein POTOM_006202 [Populus tomentosa]) HSP 1 Score: 166.0 bits (419), Expect = 3.4e-37 Identity = 87/116 (75.00%), Postives = 96/116 (82.76%), Query Frame = 0
BLAST of CaUC10G181540 vs. NCBI nr
Match: KZV53052.1 (hypothetical protein F511_23525 [Dorcoceras hygrometricum]) HSP 1 Score: 157.9 bits (398), Expect = 9.3e-35 Identity = 87/117 (74.36%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of CaUC10G181540 vs. NCBI nr
Match: KAF4348549.1 (hypothetical protein F8388_000228 [Cannabis sativa]) HSP 1 Score: 154.5 bits (389), Expect = 1.0e-33 Identity = 95/177 (53.67%), Postives = 106/177 (59.89%), Query Frame = 0
BLAST of CaUC10G181540 vs. ExPASy Swiss-Prot
Match: P03938 (Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2) HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07 Identity = 27/36 (75.00%), Postives = 28/36 (77.78%), Query Frame = 0
BLAST of CaUC10G181540 vs. ExPASy Swiss-Prot
Match: Q6L3C9 (Uncharacterized protein ycf68 OS=Saccharum hybrid OX=15819 GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07 Identity = 27/36 (75.00%), Postives = 28/36 (77.78%), Query Frame = 0
BLAST of CaUC10G181540 vs. ExPASy Swiss-Prot
Match: Q6ENQ5 (Uncharacterized protein ycf68 OS=Saccharum officinarum OX=4547 GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07 Identity = 27/36 (75.00%), Postives = 28/36 (77.78%), Query Frame = 0
BLAST of CaUC10G181540 vs. ExPASy TrEMBL
Match: A0A5D3CB41 (Uncharacterized protein ycf68 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00410 PE=3 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 5.1e-47 Identity = 100/126 (79.37%), Postives = 106/126 (84.13%), Query Frame = 0
BLAST of CaUC10G181540 vs. ExPASy TrEMBL
Match: A0A5A7UBD6 (Uncharacterized protein ycf68 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G001070 PE=3 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 3.7e-45 Identity = 97/122 (79.51%), Postives = 102/122 (83.61%), Query Frame = 0
BLAST of CaUC10G181540 vs. ExPASy TrEMBL
Match: A0A2Z7D0R2 (Uncharacterized protein ycf68 OS=Dorcoceras hygrometricum OX=472368 GN=F511_23525 PE=3 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 4.5e-35 Identity = 87/117 (74.36%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of CaUC10G181540 vs. ExPASy TrEMBL
Match: A0A7J6DSE9 (Uncharacterized protein ycf68 OS=Cannabis sativa OX=3483 GN=F8388_000228 PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 5.0e-34 Identity = 95/177 (53.67%), Postives = 106/177 (59.89%), Query Frame = 0
BLAST of CaUC10G181540 vs. ExPASy TrEMBL
Match: A0A6N2MWA8 (Uncharacterized protein ycf68 OS=Salix viminalis OX=40686 GN=SVIM_LOCUS430134 PE=3 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 4.2e-25 Identity = 131/395 (33.16%), Postives = 141/395 (35.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|