CaUC09G178530 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G178530
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	transcription termination factor MTERF4, chloroplastic
Location	Ciama_Chr09: 37809773 .. 37816002 (-)
RNA-Seq Expression	CaUC09G178530
Synteny	CaUC09G178530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAGGTTGTGAACTCCTCATGCTTCCCGAGCCGCCTCCACTACCTGGCTCCGAGTTTCCGGCCGGCGACCGAGTCCAAATCGCCTCTGGTTGGGGTTATATGGACTCTCAGAGGGTTGCGCCGACGAAGCACAAAGTTGAGTGATCGGGCGTTTTTCTGCTCCGATGCCGGTGATGGGTCGAACCGGTGTTCGAAATTGAGGGCAAGGCTGTGGAGGCCGGCTCGGTTTTTACATCGAACCGGTCGACCCAAATGCCGTTAGATTTTAGGGCTCTTTCAGTCTAGGAACGGACTTCGACTCGGAATCGTTCCCCCTCACTCTGTCACTCGCAGTCCCACTCATCCTCAGCCACTGTCGCTCAGCCGCCGACTGCCGTTTGCGTTGACTACTCAGCCACCGTTGCCGTTGTCTCCTTCCGCTGTTGCTCCTTGGTATCTTCTGGAGCTCTGCCCTCTGCACGTTTGTTTTGTAGGTCATAATCTTCACTTACGTTTGCTTTAAACTGATTTATTCAATTGACTCGATAATGAATTTTCTCTGGGAAATGTTGGCCGGCTCACCTTTTTATTGAACTGATTGTTGAACTGGGTTTGTGGTTGCTGTATTTTGAACTGGGTTTATTGCTATTATTGCTGTTATTTAAGCTGTTACTGTAGAACTGGGTTTGCTGTTGTTGCTGTCATTTTGAAGTGATTATTGTTGGCTGGATTGATTCATCTTTGTAATAATCTATGATTTTTTTTGTTCTGATTGGCCTACCTCCCCTTTTGGCCATTATACAGAGCATTTCCAGCCTTTTGCCGTGTGCAATAAAGAATAAACCAGTATTCTTCTTCTTCATCCTAATCTTCCTTGGTTAAATCAAAAGCTTAGAAATTGCAAAATGACAACCAAGTGAATCCTGAAGGAGCTTTAAAGACTTGCAGAGAGCCCCACCAACTTCTTACAGTGCAAATATGGAACTAGGGAAAAGAAAAAAGGGCAAAAGCACACTAACAACTTGTTTTTTCAGTATAAAAGAACAAGACCCAAAAGCTTAAAATTTATATGGTTGCTTTGAATTCATCAAATTGAGAACAATTACAATTAGAGACCATTGACTTATTTTTGTTTTTCTTTAGGTTTCGATCTGAGATCATCTCTTTTCCTAAGACTTAAGCTTACGAAGACTTGAGCAGAACACAAAGTAAACGAATTCAAGCCTCTTTCAGAAATAAAATTGAAATGATTATTAGTCCAAAAGTGAACTCTATAACTAGAGAAACAGATTGTTAAGGGCATAAGTAAGTCGATAATAATAGGACCTTTAGAGGGGTTGTGAGTGACCCTACAAATGTTTGATCCCTCATTAGGTTCTATATTTCTCTATGGGCTTCAATGACAAAGACTTTTTGTAATTATTCTCTAGGCCTCATTTTACTTGATTGGAACCGCTTTCTTTTGTTGGGTCTCTTTGTTGGTTGCTTTTATTTATTTATTTTCTTAATGCTATTGTACTCTTTGAAGATATTACTTCTCAAAGGAAATTCGGTTCTTGTGGGGTGTGAGATTGGATCCTTTCCTTCATTCTATCTAGGTAACTCTTGGGAATAACACAAGACATTTCTTTTTGGGACCCTACCTATGGTAGATAAGGTGAGAAAGAGATTGACTTTTTTGGAAGAGAAACTTTTTCTCTAGAGGAGGAAGATTAATCCTTATCTGTTTGGTGTTGAGTGGGATCCCTATTTACTTTTTCTCCTTTTTTAGAGCCCCATGTATGTTGAAAGACTTATGAGGGACTTTTGTGAGAAGGGGTGGAGAGAAAAGGAGCACACATTGTGAGTTGGGATGTGGTGGGGGAAGGCAACCTATGAACCTTGTAGGGGGTAAGAATTAGGGGATTTGAAGTCTCGAAAGCCCTATTGGCTAAATGGCTATGATGCTTCTCCTTTGAGCCTAATACCCTGTGGTAAGGATTATAACAAGCAAGTATGAGTCTCATCCTTCTGAGTGGTTGTTAGATGAGGTCAAAGGTACTTATAGAAATCTACGGAAAGAAATATCAACCGACTTCCCCTTTTTTCTAACTTGGTTCATTGTGTTGTAGATGATGGGAAGGAAATGTACTTCAAGGAGGATAAGTGGGCGGGGGATAAACCCTTTTGCATTATGTTTCCTTGTTTACATCATTTATCCTCTATGAGAAATTGTTGTGTTGTTGATGTCTTTGATCATTTTGGGAGTTCTCCCAATCTTTTGTTTGGTATTCGTGTTGTCTGTTTTTCTATAGGGAAATGATGGATGACATGACTCTTTTATCTCTGATTGGGGAGTTTAAGTTAAGACCAAGGAGAAGGGATGTTCATTGTTGGAGACCTAACCCCTTTAAGGGGCCGTTTGGATTGAGGGAATTGGGATGGGAATAAGGGTGCGAATGGGTAAGGGATAAACATCCCTTGTTTGGTACAAGTTTTGTAGGTTTAGGCATGGAATAAGCTATTTCCATGCATCCATTATACCCATGATGATACCCATCCAAAAAGGTGGGTTTTCTTCATGCCCACTCTCTCTCATCTTTTAATACATTTCTTTATTCTTTTATTTTATTTATTATTAAAATTAATTATTATATGAAACTAAATTTATAGTTTATGAAATTATATTAAAATTTAAATTATAGTATATAAATTTAACTCCTCCAATTTAATATATACACACACACACACACACACAATTTAATATATACTTAATTTTTATTTTAGTTTAATGAATTAGTTTATATATACATACTTATTTTTCAATAAACTGTAAAGAACCAATACAATAAAATTATCTATTAATTAATTGATTATATTTGTAGTTTGTTAAGGATCATTATGATTAATATAATATGAATTTATTTTTTAATAATTATAATTAGTTTGTCATTGAGTAATTAGAATTCATTAATTATTTTATAATTAATTTATCATCAAATCATGTAATGAAGTATCTTTAATTATAAATTACTCATTTTAAAAATACTTGTAATTAATAATTCAATTAATATGATTATTTGATTGTTAAATGATTACTTTTTTTCAAAATTTTGAATTGCATTTATTGTTTATCAATTAATCTATTAAAATTTTATAGAATTTTCATGATTAATTTTACAAATTGAATGTAAAAATAATTTATTCCCATAAAATCATGATAATATTTCCATGTACAACCAAACACAATCATTTTTTATTCCTAGCAATCTTATTCATAGGCATTCTTAATTCCTAGGCATCTACAAAACCTTAACCCAAACGGTGGTCCCTAAGGGATTCTCTTGTAGCTCTTTCTTTTGCTGCTTGCTGGACACTTCTCCCTTAAAGAGGAGGAGGGGGAGACAAAGTTCTTTCTTGGAGTGATATATGGATTGCTGATCAATCCTTCAAACACCTTTTTCCTGATGTATTTAAAATTTTAATGACCAAAGATAAGTCAGTTCAGAATTGTGGAAAGGAAATGTTTGGGATCTTTGTTTGAGAAGGAGATTTTTGACAGAGAAGTGGAAAAGTGGGCTACTCTATCTACAGTGTTGGAGCCTGGTCTTCCCTCACAAAGGGATGACACTTAACTTTGGAAGCTGGATAAGGCTGACTCGTTTTCAATTAAGTCTTCTTTGGTTGCTATCCAAGAGAAGAAGAGTGCTTGAAGATATGTACTTTCAGATCTGGGATGGTGCTATTTGAAAAGAGTAAAATTATTTCGGTGGATCATTGCCCTTAATATCATTAACACTATGGATAAGGTTCAAGGGAGATTTCCTAGTTTATGCATTCCCCCCCAACGTGTGTCATGTGTTATAAAAGTGAGGAGTCTCTCTCAAAATTGCTGCTTCACTGTGAGTTTGCTGAAAAGATGTGAAACTTCTTTGACAAGATGTTTGGTTTGCACCTGAGCCGGCGCCTATGGTTAGGTGTATGGCTGAAATTTCCTCAGGGTGATTTTTATAAGATAAATCTAGAGTGTTTTTGGTTGAATCTTGCGAATCCTGTTCCGTGGCTTGTTTGGAAGGAAAGAACTCGAAAGTTCTCTTAGATAAGTCATCTCTCCTTTCTTCTTTCTGTGACTTTGTACAGTTTACGTCGTTACTTCGAGCAGTCAACATAGGCTGTTATGTAACCCTTCATTTGGATTCAATTTAGATTGGAAGGTCTTTTTGTAGCCCTTCTGAGGAGGGGATGCGTTATCTTTTTCAAGTTCTTTTTCTTTTTCAAGTTCTAAGTTCTAAGTTTTTATTTATTTTTAAATGAGGCATTTGTAATTATGGACTTTCAATAAAATAAGAGTAAAAGGAAAAAAAGAACTTACAAGAAAATAGAAATTATTATTTAAAAGAAAAGTTTCCTATGAAATAAGTTTTTATTTATTGTTAATTATTGAAATTAATTGAGAGTGGATATGAACTATGAATAAATGAACTTGAAAGTAACCTAAATCGAATTTACGGTGGATATTAGTATTATACACATATCTTGTAGAAAGGGGTGGGTAATGACATGTATGCATCTTTTGTCAGGTGAACTCTTAGTGTAAAGCTTTGAGGGACGATGATCAGAGGCCATGATATGTGTATAATACTAATACTCATGTATGCATCTTTTGTCAGGTGAACTCTTAGTGTAAAGCTTTGAGGGACGATGATCAGAGGCCATGCCGGTGTCGTAAAACCTACATTTTCCTTCATGTTGTTTGAGATGCCTACTCTTGAATGTCACAAGTTCAAATTTACTGCCACACCCACATTTCAAACGCCTTCTGAGAAAAGGAGGGGTTTGATTACACAGCTACAATATTCTCATGGTGATAGGAGAACAGTCTTCAAATCTCTGCATTCAACTATTTCATCAAAGCCTTACAACACTAAAGTGGGTAGAAAAGAAGGTAGTGCTTCATCACTATATAGTCGTCCTAGTTTAGTCGAGATGAAGAATGTGCGGCTTGAAAATCGTTCAAAGGTTTATGAGTTCTTGCGTGGAATTGGTGTCGTCCCTGATGAACTTGATGGACTGGAGCTTCCTGTAACAGTCGAAGTTATGAAGGAACGTGTTGATTTTCTTCTCAAATTGGGACTTACAATCGAAGATATAAATAACTACCCTCTTGTTCTCGGCTGCAGTGTGAAGAAAAATATGATACCAGTACTTGATTACCTTGGTAAATTAGGCGTCAGAAAATCTACTTTCACCGAGTTCTTAAAAAGGTATCCGCAAGTCCTCCATTCCAGCGTTGTTGTCGACCTTGCTCCTGTTGTCAAGTATCTTCAAGGCATGGATATCAAGCCAACTGATATCCCTCGCGTTCTCGAGAGATATCCAGAAGTATTGGGGTTTAAGCTTGAGGGAACCATGAGTACTTCAGTGGCATACTTGGTAGGAATTGGAGTCGCAAGAAGGGAAATTGGAGGGGTTTTGACCAAATACCCTGAAATTTTGGGAATGAGGGTTGCTCGGGTAATTAAGCCTTTTGTTGAGTATCTTGAAAGTTTGGGCATTCCAAGATTAGCAGTGGCTAGGTTAATAGAGAAACGACCACACATTCTGGGGTTTGGATTAGAAAAACAAGTCAAACCCAATATCCAATTGCTCTTGGAGTTCAATGTAAGAGAAGCATACCTTTCTTCTATAGTAGCACAGTATGCTGAGATCATAGGAATGGACCTGGAAACTAAGCTTCCAACTCAGAGAAATTTACTAAAATCATTAATTGAATTGGATGATGATAACTTTGGCGCTATCATCGAAAAGATGCCGCAAATTGTTAGCCTCAGCAGTTCAGCTGTGATAAACCATGTAGATTTCTTAAAAACTTGTGGGTTTTCCTTGCTTCAAGTAAAGAATATGGTTGTAGGTTGCCCCCAATTACTTGCTTTGAATATTGACATAATGAAACACAGCTTTGAGTTCTTCAAAATGGACATGGTAAGGCCTTTAGATGACATAGTCACTTTTCCTGCATTCTTTACTTATGGTTTAGAGTCCACAATTAAGCCCAGACATAGAAAAGTTGTACAGAAGGGAATCAGTTGTTCACTTTCATGGCTCCTCAATTGTTCTGATGAAAAGTTTTTGGAAAGGATGAGCTATGATACCATAGATATGGAGGAGATGGAAACAACACCAGCATTCGATATGAATTCTCTTATACAACCTCGAAACGACGAATCAGATTCTGAGTATGAAGATGATAGTGAGGAAGAGACTTAA

mRNA sequence

ATGATGAAGGTTGTGAACTCCTCATGCTTCCCGAGCCGCCTCCACTACCTGGCTCCGAGTTTCCGGCCGGCGACCGAGTCCAAATCGCCTCTGGTTGGGGTTATATGGACTCTCAGAGGGTTGCGCCGACGAAGCACAAAGTTGAGTGATCGGGCGTTTTTCTGCTCCGATGCCGGTGATGGGTCGAACCGGTGTTCGAAATTGAGGGCAAGGCTGTGGAGGCCGGCTCGTCCCACTCATCCTCAGCCACTGTCGCTCAGCCGCCGACTGCCGTTTGCGTTGACTACTCAGCCACCGTTGCCGTTGTCTCCTTCCGCTGTTGCTCCTTGGTATCTTCTGGAGCTCTGCCCTCTGCACGTTTGTTTTGTAGGTCATAATCTTCACTTACATCTGGGATGGTGCTATTTGAAAAGAGTAAAATTATTTCGGTGGATCATTGCCCTTAATATCATTAACACTATGGATAAGAAAGGGGTGGGTAATGACATGTATGCATCTTTTGTCAGAGGCCATGCCGGTGTCGTAAAACCTACATTTTCCTTCATGTTGTTTGAGATGCCTACTCTTGAATGTCACAAGTTCAAATTTACTGCCACACCCACATTTCAAACGCCTTCTGAGAAAAGGAGGGGTTTGATTACACAGCTACAATATTCTCATGGTGATAGGAGAACAGTCTTCAAATCTCTGCATTCAACTATTTCATCAAAGCCTTACAACACTAAAGTGGGTAGAAAAGAAGGTAGTGCTTCATCACTATATAGTCGTCCTAGTTTAGTCGAGATGAAGAATGTGCGGCTTGAAAATCGTTCAAAGGTTTATGAGTTCTTGCGTGGAATTGGTGTCGTCCCTGATGAACTTGATGGACTGGAGCTTCCTGTAACAGTCGAAGTTATGAAGGAACGTGTTGATTTTCTTCTCAAATTGGGACTTACAATCGAAGATATAAATAACTACCCTCTTGTTCTCGGCTGCAGTGTGAAGAAAAATATGATACCAGTACTTGATTACCTTGGTAAATTAGGCGTCAGAAAATCTACTTTCACCGAGTTCTTAAAAAGGTATCCGCAAGTCCTCCATTCCAGCGTTGTTGTCGACCTTGCTCCTGTTGTCAAGTATCTTCAAGGCATGGATATCAAGCCAACTGATATCCCTCGCGTTCTCGAGAGATATCCAGAAGTATTGGGGTTTAAGCTTGAGGGAACCATGAGTACTTCAGTGGCATACTTGGTAGGAATTGGAGTCGCAAGAAGGGAAATTGGAGGGGTTTTGACCAAATACCCTGAAATTTTGGGAATGAGGGTTGCTCGGGTAATTAAGCCTTTTGTTGAGTATCTTGAAAGTTTGGGCATTCCAAGATTAGCAGTGGCTAGGTTAATAGAGAAACGACCACACATTCTGGGGTTTGGATTAGAAAAACAAGTCAAACCCAATATCCAATTGCTCTTGGAGTTCAATGTAAGAGAAGCATACCTTTCTTCTATAGTAGCACAGTATGCTGAGATCATAGGAATGGACCTGGAAACTAAGCTTCCAACTCAGAGAAATTTACTAAAATCATTAATTGAATTGGATGATGATAACTTTGGCGCTATCATCGAAAAGATGCCGCAAATTGTTAGCCTCAGCAGTTCAGCTGTGATAAACCATGTAGATTTCTTAAAAACTTGTGGGTTTTCCTTGCTTCAAGTAAAGAATATGGTTGTAGGTTGCCCCCAATTACTTGCTTTGAATATTGACATAATGAAACACAGCTTTGAGTTCTTCAAAATGGACATGGTAAGGCCTTTAGATGACATAGTCACTTTTCCTGCATTCTTTACTTATGGTTTAGAGTCCACAATTAAGCCCAGACATAGAAAAGTTGTACAGAAGGGAATCAGTTGTTCACTTTCATGGCTCCTCAATTGTTCTGATGAAAAGTTTTTGGAAAGGATGAGCTATGATACCATAGATATGGAGGAGATGGAAACAACACCAGCATTCGATATGAATTCTCTTATACAACCTCGAAACGACGAATCAGATTCTGAGTATGAAGATGATAGTGAGGAAGAGACTTAA

Coding sequence (CDS)

ATGATGAAGGTTGTGAACTCCTCATGCTTCCCGAGCCGCCTCCACTACCTGGCTCCGAGTTTCCGGCCGGCGACCGAGTCCAAATCGCCTCTGGTTGGGGTTATATGGACTCTCAGAGGGTTGCGCCGACGAAGCACAAAGTTGAGTGATCGGGCGTTTTTCTGCTCCGATGCCGGTGATGGGTCGAACCGGTGTTCGAAATTGAGGGCAAGGCTGTGGAGGCCGGCTCGTCCCACTCATCCTCAGCCACTGTCGCTCAGCCGCCGACTGCCGTTTGCGTTGACTACTCAGCCACCGTTGCCGTTGTCTCCTTCCGCTGTTGCTCCTTGGTATCTTCTGGAGCTCTGCCCTCTGCACGTTTGTTTTGTAGGTCATAATCTTCACTTACATCTGGGATGGTGCTATTTGAAAAGAGTAAAATTATTTCGGTGGATCATTGCCCTTAATATCATTAACACTATGGATAAGAAAGGGGTGGGTAATGACATGTATGCATCTTTTGTCAGAGGCCATGCCGGTGTCGTAAAACCTACATTTTCCTTCATGTTGTTTGAGATGCCTACTCTTGAATGTCACAAGTTCAAATTTACTGCCACACCCACATTTCAAACGCCTTCTGAGAAAAGGAGGGGTTTGATTACACAGCTACAATATTCTCATGGTGATAGGAGAACAGTCTTCAAATCTCTGCATTCAACTATTTCATCAAAGCCTTACAACACTAAAGTGGGTAGAAAAGAAGGTAGTGCTTCATCACTATATAGTCGTCCTAGTTTAGTCGAGATGAAGAATGTGCGGCTTGAAAATCGTTCAAAGGTTTATGAGTTCTTGCGTGGAATTGGTGTCGTCCCTGATGAACTTGATGGACTGGAGCTTCCTGTAACAGTCGAAGTTATGAAGGAACGTGTTGATTTTCTTCTCAAATTGGGACTTACAATCGAAGATATAAATAACTACCCTCTTGTTCTCGGCTGCAGTGTGAAGAAAAATATGATACCAGTACTTGATTACCTTGGTAAATTAGGCGTCAGAAAATCTACTTTCACCGAGTTCTTAAAAAGGTATCCGCAAGTCCTCCATTCCAGCGTTGTTGTCGACCTTGCTCCTGTTGTCAAGTATCTTCAAGGCATGGATATCAAGCCAACTGATATCCCTCGCGTTCTCGAGAGATATCCAGAAGTATTGGGGTTTAAGCTTGAGGGAACCATGAGTACTTCAGTGGCATACTTGGTAGGAATTGGAGTCGCAAGAAGGGAAATTGGAGGGGTTTTGACCAAATACCCTGAAATTTTGGGAATGAGGGTTGCTCGGGTAATTAAGCCTTTTGTTGAGTATCTTGAAAGTTTGGGCATTCCAAGATTAGCAGTGGCTAGGTTAATAGAGAAACGACCACACATTCTGGGGTTTGGATTAGAAAAACAAGTCAAACCCAATATCCAATTGCTCTTGGAGTTCAATGTAAGAGAAGCATACCTTTCTTCTATAGTAGCACAGTATGCTGAGATCATAGGAATGGACCTGGAAACTAAGCTTCCAACTCAGAGAAATTTACTAAAATCATTAATTGAATTGGATGATGATAACTTTGGCGCTATCATCGAAAAGATGCCGCAAATTGTTAGCCTCAGCAGTTCAGCTGTGATAAACCATGTAGATTTCTTAAAAACTTGTGGGTTTTCCTTGCTTCAAGTAAAGAATATGGTTGTAGGTTGCCCCCAATTACTTGCTTTGAATATTGACATAATGAAACACAGCTTTGAGTTCTTCAAAATGGACATGGTAAGGCCTTTAGATGACATAGTCACTTTTCCTGCATTCTTTACTTATGGTTTAGAGTCCACAATTAAGCCCAGACATAGAAAAGTTGTACAGAAGGGAATCAGTTGTTCACTTTCATGGCTCCTCAATTGTTCTGATGAAAAGTTTTTGGAAAGGATGAGCTATGATACCATAGATATGGAGGAGATGGAAACAACACCAGCATTCGATATGAATTCTCTTATACAACCTCGAAACGACGAATCAGATTCTGAGTATGAAGATGATAGTGAGGAAGAGACTTAA

Protein sequence

MMKVVNSSCFPSRLHYLAPSFRPATESKSPLVGVIWTLRGLRRRSTKLSDRAFFCSDAGDGSNRCSKLRARLWRPARPTHPQPLSLSRRLPFALTTQPPLPLSPSAVAPWYLLELCPLHVCFVGHNLHLHLGWCYLKRVKLFRWIIALNIINTMDKKGVGNDMYASFVRGHAGVVKPTFSFMLFEMPTLECHKFKFTATPTFQTPSEKRRGLITQLQYSHGDRRTVFKSLHSTISSKPYNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPDELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIELDDDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKHSFEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLERMSYDTIDMEEMETTPAFDMNSLIQPRNDESDSEYEDDSEEET

Homology

[Close]

BLAST of CaUC09G178530 vs. NCBI nr
Match: XP_038890870.1 (transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038890871.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida])

HSP 1 Score: 959.5 bits (2479), Expect = 1.5e-275
Identity = 489/522 (93.68%), Postives = 504/522 (96.55%), Query Frame = 0


Query: 168 VRGHAGVVKPTFSFMLFEMPTLECHKFKFTATPTFQTPS--EKRRGLITQLQYSHGDRRT 227
           +RGHAGV+KP+FSFM+FEMPTLECHKFK TA  TFQ PS  EKRRGLIT+LQYSHGDRRT
Sbjct: 2   IRGHAGVLKPSFSFMIFEMPTLECHKFKITAPSTFQMPSNYEKRRGLITKLQYSHGDRRT 61

Query: 228 VFKSLHSTISSKPYNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPD 287
           VFKSLHSTISSKPYN +VGRKE  ASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPD
Sbjct: 62  VFKSLHSTISSKPYNAQVGRKEDKASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPD 121

Query: 288 ELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRK 347
           ELDGLELPVTV+VMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRK
Sbjct: 122 ELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRK 181

Query: 348 STFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMST 407
           STFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKP DIPR+LERYPEVLGFKLEGTMST
Sbjct: 182 STFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPNDIPRILERYPEVLGFKLEGTMST 241

Query: 408 SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH 467
           SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH
Sbjct: 242 SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH 301

Query: 468 ILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIELD 527
           ILGFGLEK VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLE KL TQRNLLKSLIELD
Sbjct: 302 ILGFGLEKNVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLEGKLQTQRNLLKSLIELD 361

Query: 528 DDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKHS 587
           DDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMV+GCPQLLALNIDIMKHS
Sbjct: 362 DDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMKHS 421

Query: 588 FEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLER 647
           FEFF MDM RPL+D+V FPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKF+ER
Sbjct: 422 FEFFHMDMGRPLEDLVAFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFVER 481

Query: 648 MSYDTIDMEEMETTPAFDMNSLIQPRNDESDSEYEDDSEEET 688
           MSYDTIDMEEMET P FDMNSLIQP+N+ESDSEYE+DSEEET
Sbjct: 482 MSYDTIDMEEMETIPTFDMNSLIQPQNNESDSEYEEDSEEET 523

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BLAST of CaUC09G178530 vs. NCBI nr
Match: XP_008465763.1 (PREDICTED: transcription termination factor MTERF4, chloroplastic [Cucumis melo] >XP_008465764.1 PREDICTED: transcription termination factor MTERF4, chloroplastic [Cucumis melo] >KAA0066609.1 transcription termination factor MTERF4 [Cucumis melo var. makuwa] >TYK14207.1 transcription termination factor MTERF4 [Cucumis melo var. makuwa])

HSP 1 Score: 939.5 bits (2427), Expect = 1.6e-269
Identity = 481/523 (91.97%), Postives = 498/523 (95.22%), Query Frame = 0


Query: 168 VRGHAGVVKPTFSFMLFEMPTLECHKFKFTATPTFQTP--SEKRRGLITQLQYSHGDRRT 227
           +RGHAGVVKP  SFMLFEM TLECH FKFTATPTF T    EKRR L TQLQYSHGDRRT
Sbjct: 2   IRGHAGVVKPNVSFMLFEMSTLECHNFKFTATPTFLTSCIHEKRRCLTTQLQYSHGDRRT 61

Query: 228 VFKSLHSTISSKPYNTKVGRKEGSA-SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP 287
           VFKSLHSTISSKPY++KVGRK GS+ SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP
Sbjct: 62  VFKSLHSTISSKPYSSKVGRKGGSSGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP 121

Query: 288 DELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 347
           DELDGLELPVTV+VMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 181

Query: 348 KSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMS 407
           KSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKP DIPRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 241

Query: 408 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 467
           TSVAYLVGIGVARREIGG+LTKYPEILGMRVARVIKPFVEYLE LGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGILTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEKRP 301

Query: 468 HILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIEL 527
           HILGFGLEK+VKPNIQLLLEF VREAYL SIVAQYAEIIGMDLE  L TQRNLLKSLIEL
Sbjct: 302 HILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGMDLEANLQTQRNLLKSLIEL 361

Query: 528 DDDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKH 587
           D+DNFG IIEKMPQIVSLS SAVINHVDFLKTCGFSLLQVKNMV+GCPQLLALNIDIMKH
Sbjct: 362 DNDNFGTIIEKMPQIVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMKH 421

Query: 588 SFEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLE 647
           SFEFF+M+M RPL+D+ TFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNC+DEKF+E
Sbjct: 422 SFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFVE 481

Query: 648 RMSYDTIDMEEMETTPAFDMNSLIQPRNDESDSEYEDDSEEET 688
           RMSYDTIDMEEMETTP FDMNSL+QPRNDESDSEYE+DSEEET
Sbjct: 482 RMSYDTIDMEEMETTPTFDMNSLVQPRNDESDSEYEEDSEEET 524

[Close]

BLAST of CaUC09G178530 vs. NCBI nr
Match: XP_004143818.1 (transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KGN51142.1 hypothetical protein Csa_008517 [Cucumis sativus])

HSP 1 Score: 934.5 bits (2414), Expect = 5.3e-268
Identity = 476/523 (91.01%), Postives = 496/523 (94.84%), Query Frame = 0


Query: 168 VRGHAGVVKPTFSFMLFEMPTLECHKFKFTATPTFQTP--SEKRRGLITQLQYSHGDRRT 227
           +RGHAGV KP FS MLFEM TLECH FKFTAT TFQ P   EKR+GLITQLQYSHGDRRT
Sbjct: 2   IRGHAGVAKPNFSLMLFEMSTLECHNFKFTATRTFQMPYNHEKRKGLITQLQYSHGDRRT 61

Query: 228 VFKSLHSTISSKPYNTKVGRKEGS-ASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP 287
           VFKSLHSTISSK Y++KV RKEGS  SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP
Sbjct: 62  VFKSLHSTISSKSYSSKVDRKEGSIGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP 121

Query: 288 DELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 347
           DELDGLELPVTV+VMKERVDFLLKLGLTIEDINNYPL+LGCSVKKNMIPVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLILGCSVKKNMIPVLDYLGKLGVR 181

Query: 348 KSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMS 407
           KSTFTEFLKRYPQVLHSSVVVDLAPV+KYLQGMDIKP DIPRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 241

Query: 408 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 467
           TSVAYLVGIGV RREIGGVLTKYPEILGMRVARVIKPFVEYLE LGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVTRREIGGVLTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEKRP 301

Query: 468 HILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIEL 527
           HILGFGLEK+VKPNIQLLLEF VREAYL SIVAQYAEIIG+DLE  L TQRNLLKSLIEL
Sbjct: 302 HILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGIDLEANLQTQRNLLKSLIEL 361

Query: 528 DDDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKH 587
           D+DNFG IIEKMPQ+VSLS SAVINHVDFLKTCGFSLLQVKNMV+GCPQLLALNIDIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMKH 421

Query: 588 SFEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLE 647
           SFEFF+M+M RPL+D+ TFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNC+DEKF+E
Sbjct: 422 SFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFME 481

Query: 648 RMSYDTIDMEEMETTPAFDMNSLIQPRNDESDSEYEDDSEEET 688
           RMSYDTIDMEEMETTP FDMNSLIQPRNDESDSEYE+DSEEE+
Sbjct: 482 RMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDSEEES 524

[Close]

BLAST of CaUC09G178530 vs. NCBI nr
Match: KAG7021053.1 (Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 919.5 bits (2375), Expect = 1.8e-263
Identity = 463/522 (88.70%), Postives = 496/522 (95.02%), Query Frame = 0


Query: 168 VRGHAGVVKPTFSFMLFEMPTLECHKFKFTATPTFQTP--SEKRRGLITQLQYSHGDRRT 227
           +RGH GV+KP FS ML EMPTL+CHKFKF  T TFQT    EKRRGLIT+LQYS GDRRT
Sbjct: 16  IRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDRRT 75

Query: 228 VFKSLHSTISSKPYNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPD 287
           V KSLHSTI+SKPY++KVGRKEGSASSLYSRPSLVEMKNVR ENR+KVYEFLRGIG+VPD
Sbjct: 76  VSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVPD 135

Query: 288 ELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRK 347
           ELDGLELPVTV+VMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVRK
Sbjct: 136 ELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRK 195

Query: 348 STFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMST 407
           STFTEFL+RYPQVLHSSVVVDL PVVKYLQGMDIKP+DIPRVLERYPEVLGFKLEGTMST
Sbjct: 196 STFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMST 255

Query: 408 SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH 467
           SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH
Sbjct: 256 SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH 315

Query: 468 ILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIELD 527
           ILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLP+QRNLLKS+IELD
Sbjct: 316 ILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIELD 375

Query: 528 DDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKHS 587
           ++NFG IIEKMPQ+VSLSSSAV +HVDFLK+CGFSL QVKNMV+GCPQLLALN+DIMKHS
Sbjct: 376 NNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKHS 435

Query: 588 FEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLER 647
           F+FF+ +M RPLDD+V FPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKF ER
Sbjct: 436 FQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAER 495

Query: 648 MSYDTIDMEEMETTPAFDMNSLIQPRNDESDSEYEDDSEEET 688
           M+YDTIDMEEMET P FDM+SL QPR DESDS+YE+DSEEET
Sbjct: 496 MTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 537

[Close]

BLAST of CaUC09G178530 vs. NCBI nr
Match: KAG6586221.1 (Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 918.7 bits (2373), Expect = 3.0e-263
Identity = 463/522 (88.70%), Postives = 496/522 (95.02%), Query Frame = 0


Query: 168 VRGHAGVVKPTFSFMLFEMPTLECHKFKFTATPTFQTP--SEKRRGLITQLQYSHGDRRT 227
           +RGH GV+KP FS ML EMPTL+CHKFKF  T TFQT    EKRRGLIT+LQYS GDRRT
Sbjct: 3   IRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDRRT 62

Query: 228 VFKSLHSTISSKPYNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPD 287
           V KSLHSTI+SKPY++KVGRKEGSASSLYSRPSLVEMKNVR ENR+KVYEFLRGIG+VPD
Sbjct: 63  VSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVPD 122

Query: 288 ELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRK 347
           ELDGLELPVTV+VMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVRK
Sbjct: 123 ELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRK 182

Query: 348 STFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMST 407
           STFTEFL+RYPQVLHSSVVVDL PVVKYLQGMDIKP+DIPRVLERYPEVLGFKLEGTMST
Sbjct: 183 STFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMST 242

Query: 408 SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH 467
           SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH
Sbjct: 243 SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH 302

Query: 468 ILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIELD 527
           ILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLP+QRNLLKS+IELD
Sbjct: 303 ILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIELD 362

Query: 528 DDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKHS 587
           ++NFG IIEKMPQ+VSLSSSAV +HVDFLK+CGFSL QVKNMV+GCPQLLALN+DIMKHS
Sbjct: 363 NNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKHS 422

Query: 588 FEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLER 647
           F+FF+ +M RPLDD+V FPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKF ER
Sbjct: 423 FQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGMTCSLSWLLNCSDEKFAER 482

Query: 648 MSYDTIDMEEMETTPAFDMNSLIQPRNDESDSEYEDDSEEET 688
           M+YDTIDMEEMET P FDM+SL QPR DESDS+YE+DSEEET
Sbjct: 483 MTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 524

[Close]

BLAST of CaUC09G178530 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 1.3e-192
Identity = 349/529 (65.97%), Postives = 425/529 (80.34%), Query Frame = 0


Query: 173 GVVKPTFSFMLFEMPTLECHKFKFTATPTF-QTPSEKRR---GLITQLQYSHGDRRTVFK 232
           G  KP F  + FE P+    + +  +  T+    + K+R   G+   +Q +  +RR   +
Sbjct: 8   GFTKPGFLLVHFEPPSFFAVRSRSLSDSTYGNLCNHKKRPGTGIGLTVQCAIANRRFSSR 67

Query: 233 SL---------HSTISSKPYNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRG 292
           SL          S+ SS     +   K   + SLYSRPSL++M   +  NR+KVYEFLRG
Sbjct: 68  SLDSPRRERSSRSSSSSGRDRDRDKDKGRDSKSLYSRPSLLDMNKEKAANRAKVYEFLRG 127

Query: 293 IGVVPDELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLG 352
           IG+VPDELDGLELPVT +VMKERV+FL KLGLTIEDINNYPLVLGCSVKKNM+PVLDYLG
Sbjct: 128 IGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLG 187

Query: 353 KLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKL 412
           KLGVRKSTFTEFL+RYPQVLHSSVV+DLAPVVKYLQG+DIKP+D+PRVLERYPEVLGFKL
Sbjct: 188 KLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEVLGFKL 247

Query: 413 EGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARL 472
           EGTMSTSVAYLVGIGVARREIGG+LT+YPEILGMRVAR+IKP VEYLE LGIPRLA ARL
Sbjct: 248 EGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRLAAARL 307

Query: 473 IEKRPHILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLK 532
           IEKRPHILGF L+  VKPN+Q+L +FNVRE  L SI+AQY EIIG+DL+ KL TQR LL 
Sbjct: 308 IEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQRKLLC 367

Query: 533 SLIELDDDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNI 592
           S I L+ ++ G++IE+MPQ VSLS S ++ H+DFL  CGFS+ Q + MV+GCPQ+LALN+
Sbjct: 368 SAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQVLALNL 427

Query: 593 DIMKHSFEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSD 652
            IMK SFE+F+ +M RPL D+V FPAFFTYGLEST+KPRH+K+++KGI CSL+W+LNCSD
Sbjct: 428 GIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWMLNCSD 487

Query: 653 EKFLERMSYDTIDMEEMETTP-AFDMNSLIQP-RNDESDSEYEDDSEEE 687
           EKF +RMSYDTID+EE+ET P +FDMN+L+QP R +ESDSEYE++ +++
Sbjct: 488 EKFEQRMSYDTIDIEEVETDPSSFDMNTLMQPEREEESDSEYEEEEDDD 536

[Close]

BLAST of CaUC09G178530 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 2.7e-158
Identity = 274/439 (62.41%), Postives = 356/439 (81.09%), Query Frame = 0


Query: 250 ASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPDELDGLELPVTVEVMKERVDFLLKL 309
           +SSLY+RPSL++M+  R   R+ V  FL  +GV P EL GLELP TV+VM+ERV+FL  L
Sbjct: 63  SSSLYARPSLLDMERGRAARRADVDAFLASLGVDPGELAGLELPATVDVMRERVEFLHSL 122

Query: 310 GLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAP 369
            L+ ED+  YPL LGCSV+KNM+PVLDYLGKLGVR+    + L+RYPQVLH+SVVVDLAP
Sbjct: 123 DLSNEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRQDALPDLLRRYPQVLHASVVVDLAP 182

Query: 370 VVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPE 429
           VVKYLQGMD++P D+PRVLERYPE+LGFKLEGTMSTS+AYLVGIGVARR++G V+T++PE
Sbjct: 183 VVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPE 242

Query: 430 ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKQVKPNIQLLLEFNVRE 489
           +LGMRV ++IKPFVE+LE +G+ RLA+AR+IEK+P++LGFGLE +VKPNI+ LLEF VR+
Sbjct: 243 VLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLEDKVKPNIEALLEFGVRK 302

Query: 490 AYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIELDDDNFGAIIEKMPQIVSLSSSAVIN 549
             L+ IVAQY +I+G++L  KL TQ++L +S I +  ++FG +IE+MPQ +SL  +AV+ 
Sbjct: 303 EALAFIVAQYPDILGIELRDKLATQQSLFESSILVSSEDFGRVIERMPQAISLGRTAVLK 362

Query: 550 HVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKHSFEFFKMDMVRPLDDIVTFPAFFTY 609
           HV+FL +CGF L QV  MVV CPQLLALN+DIMK SFE+F+ +M R L+++V FPAFFTY
Sbjct: 363 HVNFLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTY 422

Query: 610 GLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLERMSYDTIDMEEMETTPAFDMNSLIQ 669
           GLEST++PRH  V +KG +CSL+WLLNCSD KF ERM YDTI +EEME   +FD N+L +
Sbjct: 423 GLESTVRPRHEMVAKKGFTCSLAWLLNCSDAKFDERMKYDTIGIEEMEVDNSFDTNTLSE 482

Query: 670 PRNDE-SDSEYEDDSEEET 688
              DE  D + ++DS+ ++
Sbjct: 483 RVEDEVEDEDLDEDSDYDS 501

[Close]

BLAST of CaUC09G178530 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 5.1e-157
Identity = 269/438 (61.42%), Postives = 352/438 (80.37%), Query Frame = 0


Query: 250 ASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPDELDGLELPVTVEVMKERVDFLLKL 309
           +SSLY+RPSL++M+  R   R+ V  FL  +GV P EL GLELPVTV+VM+ER +FL  L
Sbjct: 54  SSSLYARPSLLDMERDRATRRADVDAFLTSLGVDPGELAGLELPVTVDVMRERAEFLGSL 113

Query: 310 GLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAP 369
           GLT ED+  YPL LGCSV+KNM+PVLDYLGKLGVR+    + L+RYPQVLH+SVVVDLAP
Sbjct: 114 GLTQEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRRDALPDLLRRYPQVLHASVVVDLAP 173

Query: 370 VVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPE 429
           VVKYLQGMD++PTD+PRVLERYPE+LGFKLEGTMSTSVAYLVGIGV RR++G V+T++PE
Sbjct: 174 VVKYLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPE 233

Query: 430 ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKQVKPNIQLLLEFNVRE 489
           +LGMRV ++IKPFVE+LE +G+ RLA+AR+IEK+P++LGFGL+++VKPNI+ L++  VR+
Sbjct: 234 VLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRK 293

Query: 490 AYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIELDDDNFGAIIEKMPQIVSLSSSAVIN 549
             L+SIV QY +++G++L  KL  Q++L +S I +  ++FG ++E+MPQ +SL  +AV+ 
Sbjct: 294 EALASIVMQYPDVLGLELRDKLVAQQSLFESSILVSREDFGRVLERMPQAISLGRAAVLK 353

Query: 550 HVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKHSFEFFKMDMVRPLDDIVTFPAFFTY 609
           HV+FL  CGF L QV  MVV CPQLLALNIDIM+ +FE+FK +M R L+++V FPAFFTY
Sbjct: 354 HVNFLTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTY 413

Query: 610 GLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLERMSYDTIDMEEMETTPAFDMNSLIQ 669
           G+EST++PRH  V +KG++CSL+WLLNCSD KF ERM YDTI +EEME   + DMN+ + 
Sbjct: 414 GIESTVRPRHEMVSRKGLTCSLAWLLNCSDAKFDERMKYDTIGVEEMEREDSSDMNASVD 473

Query: 670 PRNDE--SDSEYEDDSEE 686
               E   DS+Y D  +E
Sbjct: 474 EVESEEYEDSDYGDSDDE 491

[Close]

BLAST of CaUC09G178530 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 2.7e-33
Identity = 93/363 (25.62%), Postives = 180/363 (49.59%), Query Frame = 0


Query: 328 KKNMIPVLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRV 387
           ++ +  +++YL   GVR+      + R P++L  S + ++   V +   M +   D   +
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFS-MEEVKSRVDFFLKMGMNQNDFGTM 337

Query: 388 LERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLE 447
           +  YP+++GF     M   + YL   G++  E+G +L   P ++G  +    KP V+Y  
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 397

Query: 448 SLGIPRLAVARLIEKRPHILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDL 507
            LGIP+  + R++  +P +    LEK + P ++ L E  +    + +++ ++  ++   L
Sbjct: 398 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 508 ETKLPTQRNLLKSLIELDDDNFGAIIEKMPQIVSLSSSAVIN-HVDFLKTCGFSLLQVKN 567
             K+      L +   +   + G +I   P ++  S    +  ++ +  + G    Q+  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 568 MVVGCPQLLALNIDIMKHSFEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKG 627
           M+   P LL  N+D ++  + + +  M+RPL D++ FP FF+Y LE  I PRH  +V+  
Sbjct: 518 MIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR 577

Query: 628 ISCSLSWLLNCSDEKFLERMSYDTIDMEEMETTPAFDMNSLIQPRNDE-SDSE--YEDDS 687
           ++  L ++L C+DE+F ER   D ++  E         +S  QP ++  SD E  + D++
Sbjct: 578 VNFKLRYMLACTDEEF-ERRVRDKVERRERFEAGLDSEDS--QPSDENISDQEIAFSDEA 636

[Close]

BLAST of CaUC09G178530 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 4.8e-30
Identity = 66/276 (23.91%), Postives = 145/276 (52.54%), Query Frame = 0


Query: 379 IKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 438
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 439 IKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKQVKPNIQLLLEFNV-REAYLSSIVA 498
           + P + + ++LG+P   + ++I   P ++ + ++ ++   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 499 QYAEIIGMDLETKLPTQRNLLKSLIELDDDNFGAIIEKMPQIVSLSSSAVIN-HVDFLKT 558
           +   ++G  ++ +L      LKS + L +D   +++   PQ++    + ++  + D+LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 559 CGFSLLQVKNMVVGCPQLLALNI-DIMKHSFEFFKMDMVRPLDDIVTFPAFFTYGLESTI 618
           CGF   Q+  MV G PQ+L  ++ + ++    F    M R +D++ ++P FF +GL+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 619 KPRHRKVVQKGISCSLSWLLNCSDEKFLERMSYDTI 652
           + R + V +  I CSL  +L+C+ +KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

[Close]

BLAST of CaUC09G178530 vs. ExPASy TrEMBL
Match: A0A1S3CR33 (transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503367 PE=3 SV=1)

HSP 1 Score: 939.5 bits (2427), Expect = 7.9e-270
Identity = 481/523 (91.97%), Postives = 498/523 (95.22%), Query Frame = 0


Query: 168 VRGHAGVVKPTFSFMLFEMPTLECHKFKFTATPTFQTP--SEKRRGLITQLQYSHGDRRT 227
           +RGHAGVVKP  SFMLFEM TLECH FKFTATPTF T    EKRR L TQLQYSHGDRRT
Sbjct: 2   IRGHAGVVKPNVSFMLFEMSTLECHNFKFTATPTFLTSCIHEKRRCLTTQLQYSHGDRRT 61

Query: 228 VFKSLHSTISSKPYNTKVGRKEGSA-SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP 287
           VFKSLHSTISSKPY++KVGRK GS+ SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP
Sbjct: 62  VFKSLHSTISSKPYSSKVGRKGGSSGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP 121

Query: 288 DELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 347
           DELDGLELPVTV+VMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 181

Query: 348 KSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMS 407
           KSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKP DIPRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 241

Query: 408 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 467
           TSVAYLVGIGVARREIGG+LTKYPEILGMRVARVIKPFVEYLE LGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGILTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEKRP 301

Query: 468 HILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIEL 527
           HILGFGLEK+VKPNIQLLLEF VREAYL SIVAQYAEIIGMDLE  L TQRNLLKSLIEL
Sbjct: 302 HILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGMDLEANLQTQRNLLKSLIEL 361

Query: 528 DDDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKH 587
           D+DNFG IIEKMPQIVSLS SAVINHVDFLKTCGFSLLQVKNMV+GCPQLLALNIDIMKH
Sbjct: 362 DNDNFGTIIEKMPQIVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMKH 421

Query: 588 SFEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLE 647
           SFEFF+M+M RPL+D+ TFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNC+DEKF+E
Sbjct: 422 SFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFVE 481

Query: 648 RMSYDTIDMEEMETTPAFDMNSLIQPRNDESDSEYEDDSEEET 688
           RMSYDTIDMEEMETTP FDMNSL+QPRNDESDSEYE+DSEEET
Sbjct: 482 RMSYDTIDMEEMETTPTFDMNSLVQPRNDESDSEYEEDSEEET 524

[Close]

BLAST of CaUC09G178530 vs. ExPASy TrEMBL
Match: A0A5A7VMZ0 (Transcription termination factor MTERF4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00320 PE=3 SV=1)

HSP 1 Score: 939.5 bits (2427), Expect = 7.9e-270
Identity = 481/523 (91.97%), Postives = 498/523 (95.22%), Query Frame = 0


Query: 168 VRGHAGVVKPTFSFMLFEMPTLECHKFKFTATPTFQTP--SEKRRGLITQLQYSHGDRRT 227
           +RGHAGVVKP  SFMLFEM TLECH FKFTATPTF T    EKRR L TQLQYSHGDRRT
Sbjct: 2   IRGHAGVVKPNVSFMLFEMSTLECHNFKFTATPTFLTSCIHEKRRCLTTQLQYSHGDRRT 61

Query: 228 VFKSLHSTISSKPYNTKVGRKEGSA-SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP 287
           VFKSLHSTISSKPY++KVGRK GS+ SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP
Sbjct: 62  VFKSLHSTISSKPYSSKVGRKGGSSGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP 121

Query: 288 DELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 347
           DELDGLELPVTV+VMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 181

Query: 348 KSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMS 407
           KSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKP DIPRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 241

Query: 408 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 467
           TSVAYLVGIGVARREIGG+LTKYPEILGMRVARVIKPFVEYLE LGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVARREIGGILTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEKRP 301

Query: 468 HILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIEL 527
           HILGFGLEK+VKPNIQLLLEF VREAYL SIVAQYAEIIGMDLE  L TQRNLLKSLIEL
Sbjct: 302 HILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGMDLEANLQTQRNLLKSLIEL 361

Query: 528 DDDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKH 587
           D+DNFG IIEKMPQIVSLS SAVINHVDFLKTCGFSLLQVKNMV+GCPQLLALNIDIMKH
Sbjct: 362 DNDNFGTIIEKMPQIVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMKH 421

Query: 588 SFEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLE 647
           SFEFF+M+M RPL+D+ TFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNC+DEKF+E
Sbjct: 422 SFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFVE 481

Query: 648 RMSYDTIDMEEMETTPAFDMNSLIQPRNDESDSEYEDDSEEET 688
           RMSYDTIDMEEMETTP FDMNSL+QPRNDESDSEYE+DSEEET
Sbjct: 482 RMSYDTIDMEEMETTPTFDMNSLVQPRNDESDSEYEEDSEEET 524

[Close]

BLAST of CaUC09G178530 vs. ExPASy TrEMBL
Match: A0A0A0KRV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G466880 PE=3 SV=1)

HSP 1 Score: 934.5 bits (2414), Expect = 2.6e-268
Identity = 476/523 (91.01%), Postives = 496/523 (94.84%), Query Frame = 0


Query: 168 VRGHAGVVKPTFSFMLFEMPTLECHKFKFTATPTFQTP--SEKRRGLITQLQYSHGDRRT 227
           +RGHAGV KP FS MLFEM TLECH FKFTAT TFQ P   EKR+GLITQLQYSHGDRRT
Sbjct: 2   IRGHAGVAKPNFSLMLFEMSTLECHNFKFTATRTFQMPYNHEKRKGLITQLQYSHGDRRT 61

Query: 228 VFKSLHSTISSKPYNTKVGRKEGS-ASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP 287
           VFKSLHSTISSK Y++KV RKEGS  SSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP
Sbjct: 62  VFKSLHSTISSKSYSSKVDRKEGSIGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVP 121

Query: 288 DELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 347
           DELDGLELPVTV+VMKERVDFLLKLGLTIEDINNYPL+LGCSVKKNMIPVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLILGCSVKKNMIPVLDYLGKLGVR 181

Query: 348 KSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMS 407
           KSTFTEFLKRYPQVLHSSVVVDLAPV+KYLQGMDIKP DIPRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMS 241

Query: 408 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 467
           TSVAYLVGIGV RREIGGVLTKYPEILGMRVARVIKPFVEYLE LGIPRLAVARLIEKRP
Sbjct: 242 TSVAYLVGIGVTRREIGGVLTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEKRP 301

Query: 468 HILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIEL 527
           HILGFGLEK+VKPNIQLLLEF VREAYL SIVAQYAEIIG+DLE  L TQRNLLKSLIEL
Sbjct: 302 HILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGIDLEANLQTQRNLLKSLIEL 361

Query: 528 DDDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKH 587
           D+DNFG IIEKMPQ+VSLS SAVINHVDFLKTCGFSLLQVKNMV+GCPQLLALNIDIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMKH 421

Query: 588 SFEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLE 647
           SFEFF+M+M RPL+D+ TFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNC+DEKF+E
Sbjct: 422 SFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFME 481

Query: 648 RMSYDTIDMEEMETTPAFDMNSLIQPRNDESDSEYEDDSEEET 688
           RMSYDTIDMEEMETTP FDMNSLIQPRNDESDSEYE+DSEEE+
Sbjct: 482 RMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDSEEES 524

[Close]

BLAST of CaUC09G178530 vs. ExPASy TrEMBL
Match: A0A6J1FDE7 (transcription termination factor MTERF4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444359 PE=3 SV=1)

HSP 1 Score: 916.4 bits (2367), Expect = 7.2e-263
Identity = 463/522 (88.70%), Postives = 494/522 (94.64%), Query Frame = 0


Query: 168 VRGHAGVVKPTFSFMLFEMPTLECHKFKFTATPTFQTP--SEKRRGLITQLQYSHGDRRT 227
           +RGH GVVKP FS ML EMPTL+CHKFKF  T TFQT    EKRRGLIT+LQYS GD RT
Sbjct: 3   IRGHTGVVKPNFSIMLLEMPTLKCHKFKFDTTSTFQTSPNHEKRRGLITKLQYSRGDWRT 62

Query: 228 VFKSLHSTISSKPYNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPD 287
           V KSLHSTI+SKPY++KVGRKEGSASSLYSRPSLVEMKNVR ENR+KVYEFLRGIG+VPD
Sbjct: 63  VSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVPD 122

Query: 288 ELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRK 347
           ELDGLELPVTV+VMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVRK
Sbjct: 123 ELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRK 182

Query: 348 STFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMST 407
           STFTEFL+RYPQVLHSSVVVDL PVVKYLQGMDIKP+DIPRVLERYPEVLGFKLEGTMST
Sbjct: 183 STFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMST 242

Query: 408 SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH 467
           SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH
Sbjct: 243 SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH 302

Query: 468 ILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIELD 527
           ILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLP+QRNLLKS+IELD
Sbjct: 303 ILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIELD 362

Query: 528 DDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKHS 587
           +DNFG IIEKMPQ+VSLSSSAV +HVD LK+CGFSL QVKNMV+GCPQLLALN+DIMKHS
Sbjct: 363 NDNFGTIIEKMPQVVSLSSSAVNSHVDCLKSCGFSLQQVKNMVIGCPQLLALNLDIMKHS 422

Query: 588 FEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLER 647
           F+FF+ +M RPLDD+V FPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNCSDEKF ER
Sbjct: 423 FQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAER 482

Query: 648 MSYDTIDMEEMETTPAFDMNSLIQPRNDESDSEYEDDSEEET 688
           M+YDTIDMEEMET P FDM+SL QPR DESDS+YE+DSEEET
Sbjct: 483 MTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 524

[Close]

BLAST of CaUC09G178530 vs. ExPASy TrEMBL
Match: A0A6J1DUY1 (transcription termination factor MTERF4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023323 PE=3 SV=1)

HSP 1 Score: 909.1 bits (2348), Expect = 1.1e-260
Identity = 460/522 (88.12%), Postives = 496/522 (95.02%), Query Frame = 0


Query: 168 VRGHAGVVKPTFSFMLFEMPTLECHKFKFTATPTFQTPS--EKRRGLITQLQYSHGDRRT 227
           +R HAGVVKP FS ++ +MPTL+C KF FT T  FQTPS  ++RRGLIT+LQYS GDRRT
Sbjct: 3   IRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRRT 62

Query: 228 VFKSLHSTISSKPYNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVVPD 287
           V KSLHSTI+SKP +T+VGRKEGSASSLYS PSLVEMKNVRLENR+KVYEFL GIG+VPD
Sbjct: 63  VSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVPD 122

Query: 288 ELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRK 347
           ELDGLELPVTV+VMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRK
Sbjct: 123 ELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRK 182

Query: 348 STFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKLEGTMST 407
           STFTEFL+RYPQVLH+SVVVDLAPVVKYLQGMDIKP DIP VLERYPEVLGFKLEGTMST
Sbjct: 183 STFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPHVLERYPEVLGFKLEGTMST 242

Query: 408 SVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH 467
           SVAYLVGIGVAR+EIGGVLTKYP+ILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH
Sbjct: 243 SVAYLVGIGVARKEIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPH 302

Query: 468 ILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLKSLIELD 527
           ILGFGLEK+VKPNIQ+LL+FNVRE YLSSIVAQYAEIIGMDLETKL +QRNLLKS+IELD
Sbjct: 303 ILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIELD 362

Query: 528 DDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNIDIMKHS 587
           DDNFG II KMPQIVSLSSSAVINHVDFLK+CGFSL+QVKNMV+GCPQLLALN+DIMKHS
Sbjct: 363 DDNFGTIIGKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKHS 422

Query: 588 FEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSDEKFLER 647
           F+FF+M+M RPLDD+VTFPAFFTYGLESTIKPRHRKVVQKGI+CSLSWLLNCSDEKF ER
Sbjct: 423 FQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGITCSLSWLLNCSDEKFAER 482

Query: 648 MSYDTIDMEEMETTPAFDMNSLIQPRNDESDSEYEDDSEEET 688
           M+YDTIDMEEMET P FDMNSLIQPRND+SDS+YE+DSEEET
Sbjct: 483 MTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524

[Close]

BLAST of CaUC09G178530 vs. TAIR 10
Match: AT4G02990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 674.5 bits (1739), Expect = 9.2e-194
Identity = 349/529 (65.97%), Postives = 425/529 (80.34%), Query Frame = 0


Query: 173 GVVKPTFSFMLFEMPTLECHKFKFTATPTF-QTPSEKRR---GLITQLQYSHGDRRTVFK 232
           G  KP F  + FE P+    + +  +  T+    + K+R   G+   +Q +  +RR   +
Sbjct: 8   GFTKPGFLLVHFEPPSFFAVRSRSLSDSTYGNLCNHKKRPGTGIGLTVQCAIANRRFSSR 67

Query: 233 SL---------HSTISSKPYNTKVGRKEGSASSLYSRPSLVEMKNVRLENRSKVYEFLRG 292
           SL          S+ SS     +   K   + SLYSRPSL++M   +  NR+KVYEFLRG
Sbjct: 68  SLDSPRRERSSRSSSSSGRDRDRDKDKGRDSKSLYSRPSLLDMNKEKAANRAKVYEFLRG 127

Query: 293 IGVVPDELDGLELPVTVEVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLG 352
           IG+VPDELDGLELPVT +VMKERV+FL KLGLTIEDINNYPLVLGCSVKKNM+PVLDYLG
Sbjct: 128 IGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLG 187

Query: 353 KLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRVLERYPEVLGFKL 412
           KLGVRKSTFTEFL+RYPQVLHSSVV+DLAPVVKYLQG+DIKP+D+PRVLERYPEVLGFKL
Sbjct: 188 KLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEVLGFKL 247

Query: 413 EGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARL 472
           EGTMSTSVAYLVGIGVARREIGG+LT+YPEILGMRVAR+IKP VEYLE LGIPRLA ARL
Sbjct: 248 EGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRLAAARL 307

Query: 473 IEKRPHILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPTQRNLLK 532
           IEKRPHILGF L+  VKPN+Q+L +FNVRE  L SI+AQY EIIG+DL+ KL TQR LL 
Sbjct: 308 IEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQRKLLC 367

Query: 533 SLIELDDDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCGFSLLQVKNMVVGCPQLLALNI 592
           S I L+ ++ G++IE+MPQ VSLS S ++ H+DFL  CGFS+ Q + MV+GCPQ+LALN+
Sbjct: 368 SAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQVLALNL 427

Query: 593 DIMKHSFEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCSD 652
            IMK SFE+F+ +M RPL D+V FPAFFTYGLEST+KPRH+K+++KGI CSL+W+LNCSD
Sbjct: 428 GIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWMLNCSD 487

Query: 653 EKFLERMSYDTIDMEEMETTP-AFDMNSLIQP-RNDESDSEYEDDSEEE 687
           EKF +RMSYDTID+EE+ET P +FDMN+L+QP R +ESDSEYE++ +++
Sbjct: 488 EKFEQRMSYDTIDIEEVETDPSSFDMNTLMQPEREEESDSEYEEEEDDD 536

[Close]

BLAST of CaUC09G178530 vs. TAIR 10
Match: AT2G44020.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 443.4 bits (1139), Expect = 3.4e-124
Identity = 213/429 (49.65%), Postives = 317/429 (73.89%), Query Frame = 0


Query: 259 LVEMKNVRLENRSKVYEFLRGIGVVPDELDGLELPVTVEVMKERVDFLLKLGLTIEDINN 318
           +++ K  +L NR K+ ++L+G+G++ DEL+ +ELP T+EVM ERV+FL KLGLTI+DIN 
Sbjct: 72  VIQGKKEKLVNRVKICDYLKGLGIITDELESIELPSTIEVMCERVEFLQKLGLTIDDINE 131

Query: 319 YPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMD 378
           YPL+LGCSV+KN+IPVL YL K+G+ +S   EF+K YPQVLH+SVVV+LAPVVK+L+G+D
Sbjct: 132 YPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLD 191

Query: 379 IKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 438
           ++  D+  VL +YPE+LGFKLEGTMSTSVAYLV IGV+ R+IG ++T+YP +LGMRV  +
Sbjct: 192 VEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTM 251

Query: 439 IKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQ 498
           IKP V+YL S+G+P+  VAR++EKR +I+G+ LE+ VKPN+  L+ F V++  L  ++AQ
Sbjct: 252 IKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQ 311

Query: 499 YAEIIGMDLETKLPTQRNLLKSLIELDDDNFGAIIEKMPQIVSLSSSAVINHVDFLKTCG 558
           Y +I+G+ ++ K+ TQ+      +++D + F  ++EKMPQIVSL  + ++  ++FL    
Sbjct: 312 YPQILGLPVKAKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVSLKQNVIMKPIEFLLGRA 371

Query: 559 FSLLQVKNMVVGCPQLLALNIDIMKHSFEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPR 618
           F +  +  MVV CPQ+L   +++MK+S+ F+K +M RP+ ++V +P +FTY LES IKPR
Sbjct: 372 FQVEDIAKMVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPR 431

Query: 619 HRKVVQKGISCSLSWLLNCSDEKFLERMSYDTIDMEEMETTPAFDMNSLIQ-PRNDESDS 678
           ++K+  KGI  SL+W LNCSD++F ER+  + ID +     P FDM   ++ P  +    
Sbjct: 432 YQKLQSKGIRSSLNWFLNCSDQRFEERLQGNFIDPD--TEGPTFDMGGKLEMPGGEIVTD 491

Query: 679 EYEDDSEEE 687
           E ED+S++E
Sbjct: 492 EEEDESDDE 498

[Close]

BLAST of CaUC09G178530 vs. TAIR 10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 145.2 bits (365), Expect = 1.9e-34
Identity = 93/363 (25.62%), Postives = 180/363 (49.59%), Query Frame = 0


Query: 328 KKNMIPVLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPTDIPRV 387
           ++ +  +++YL   GVR+      + R P++L  S + ++   V +   M +   D   +
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFS-MEEVKSRVDFFLKMGMNQNDFGTM 337

Query: 388 LERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLE 447
           +  YP+++GF     M   + YL   G++  E+G +L   P ++G  +    KP V+Y  
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 397

Query: 448 SLGIPRLAVARLIEKRPHILGFGLEKQVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDL 507
            LGIP+  + R++  +P +    LEK + P ++ L E  +    + +++ ++  ++   L
Sbjct: 398 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 508 ETKLPTQRNLLKSLIELDDDNFGAIIEKMPQIVSLSSSAVIN-HVDFLKTCGFSLLQVKN 567
             K+      L +   +   + G +I   P ++  S    +  ++ +  + G    Q+  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 568 MVVGCPQLLALNIDIMKHSFEFFKMDMVRPLDDIVTFPAFFTYGLESTIKPRHRKVVQKG 627
           M+   P LL  N+D ++  + + +  M+RPL D++ FP FF+Y LE  I PRH  +V+  
Sbjct: 518 MIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR 577

Query: 628 ISCSLSWLLNCSDEKFLERMSYDTIDMEEMETTPAFDMNSLIQPRNDE-SDSE--YEDDS 687
           ++  L ++L C+DE+F ER   D ++  E         +S  QP ++  SD E  + D++
Sbjct: 578 VNFKLRYMLACTDEEF-ERRVRDKVERRERFEAGLDSEDS--QPSDENISDQEIAFSDEA 636

[Close]

BLAST of CaUC09G178530 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 134.4 bits (337), Expect = 3.4e-31
Identity = 66/276 (23.91%), Postives = 145/276 (52.54%), Query Frame = 0


Query: 379 IKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 438
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 439 IKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKQVKPNIQLLLEFNV-REAYLSSIVA 498
           + P + + ++LG+P   + ++I   P ++ + ++ ++   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 499 QYAEIIGMDLETKLPTQRNLLKSLIELDDDNFGAIIEKMPQIVSLSSSAVIN-HVDFLKT 558
           +   ++G  ++ +L      LKS + L +D   +++   PQ++    + ++  + D+LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 559 CGFSLLQVKNMVVGCPQLLALNI-DIMKHSFEFFKMDMVRPLDDIVTFPAFFTYGLESTI 618
           CGF   Q+  MV G PQ+L  ++ + ++    F    M R +D++ ++P FF +GL+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 619 KPRHRKVVQKGISCSLSWLLNCSDEKFLERMSYDTI 652
           + R + V +  I CSL  +L+C+ +KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

[Close]

BLAST of CaUC09G178530 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 134.4 bits (337), Expect = 3.4e-31
Identity = 66/276 (23.91%), Postives = 145/276 (52.54%), Query Frame = 0


Query: 379 IKPTDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 438
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 439 IKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKQVKPNIQLLLEFNV-REAYLSSIVA 498
           + P + + ++LG+P   + ++I   P ++ + ++ ++   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 499 QYAEIIGMDLETKLPTQRNLLKSLIELDDDNFGAIIEKMPQIVSLSSSAVIN-HVDFLKT 558
           +   ++G  ++ +L      LKS + L +D   +++   PQ++    + ++  + D+LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 559 CGFSLLQVKNMVVGCPQLLALNI-DIMKHSFEFFKMDMVRPLDDIVTFPAFFTYGLESTI 618
           CGF   Q+  MV G PQ+L  ++ + ++    F    M R +D++ ++P FF +GL+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 619 KPRHRKVVQKGISCSLSWLLNCSDEKFLERMSYDTI 652
           + R + V +  I CSL  +L+C+ +KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

The following BLAST results are available for this feature:

BLAST of CaUC09G178530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890870.1	1.5e-275	93.68	transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_0...	[more]
XP_008465763.1	1.6e-269	91.97	PREDICTED: transcription termination factor MTERF4, chloroplastic [Cucumis melo]...	[more]
XP_004143818.1	5.3e-268	91.01	transcription termination factor MTERF4, chloroplastic [Cucumis sativus] >KGN511...	[more]
KAG7021053.1	1.8e-263	88.70	Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyr...	[more]
KAG6586221.1	3.0e-263	88.70	Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyr...	[more]

BLAST of CaUC09G178530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT96	1.3e-192	65.97	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	2.7e-158	62.41	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
B6TGN4	5.1e-157	61.42	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
F4IHL3	2.7e-33	25.62	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	4.8e-30	23.91	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of CaUC09G178530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CR33	7.9e-270	91.97	transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 G...	[more]
A0A5A7VMZ0	7.9e-270	91.97	Transcription termination factor MTERF4 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0KRV7	2.6e-268	91.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G466880 PE=3 SV=1	[more]
A0A6J1FDE7	7.2e-263	88.70	transcription termination factor MTERF4, chloroplastic OS=Cucurbita moschata OX=...	[more]
A0A6J1DUY1	1.1e-260	88.12	transcription termination factor MTERF4, chloroplastic OS=Momordica charantia OX...	[more]

BLAST of CaUC09G178530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02990.1	9.2e-194	65.97	Mitochondrial transcription termination factor family protein	[more]
AT2G44020.1	3.4e-124	49.65	Mitochondrial transcription termination factor family protein	[more]
AT2G21710.1	1.9e-34	25.62	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.1	3.4e-31	23.91	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.2	3.4e-31	23.91	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 493..525 e-value: 590.0 score: 5.7 coord: 565..596 e-value: 5.9 score: 15.9 coord: 313..344 e-value: 0.0039 score: 26.4 coord: 250..283 e-value: 640.0 score: 5.4 coord: 421..452 e-value: 1.1E-4 score: 31.6 coord: 597..628 e-value: 0.032 score: 23.4 coord: 457..488 e-value: 0.0011 score: 28.2 coord: 349..380 e-value: 4.8E-4 score: 29.4 coord: 385..416 e-value: 0.0053 score: 26.0 coord: 530..560 e-value: 0.031 score: 23.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 335..643 e-value: 3.3E-104 score: 348.2
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 202..676
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 298..436 e-value: 1.1E-24 score: 89.0 coord: 437..652 e-value: 2.6E-47 score: 163.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 662..687
None	No IPR available	PANTHER	PTHR13068:SF109	TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC	coord: 202..676

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G178530.1	CaUC09G178530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0042794	plastid rRNA transcription
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0009536	plastid
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003729	mRNA binding