CaUC09G177850 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATTTTGTTATTCATCTTTGATTCAATGTTTTGATGTGTTGTTCGATCGGTTTGATTACTACTTTTGCTGAATTTCCGTTTTCTTGATTCGATTCGCCACTTTGATTTCTTTATTCGTTTGATTTCGCTAAGGATTGGTCAATTCTTCGCTTCTATGATTCCCACTTTGATGTGTTTATTCGTCTTCCTGAGATTCAAGTTGATAGATAGATTCTGTGCTTGTTATATTGGAGGGGCAGAAATCTGGATTTTCCTCGAGATTTAATTAGTTGTTGTAGGTCGTTTCTGAATCAGTAAATCCGTTTCTTGCAGTCCAATATGAGATGTATTTGGATTAACTGGTGTTGGAGGAAACTTCTTAATTGGTTTATTTTGTTTTGTTTGATTAATATCGGATTGAAGGTATTTACAAAATCTATTGCCATTAAGGGTTAAGCAATGTTGTATGGTAATAGATGCTGGTTGTTGGATTCATAGTCATCAGATTCATAGAGGGTACATCGTGTTGTTCTCTCATTTTGCAGGACAAAGGTCGGCCACTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGTTTTACCGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGCCTGCAGCAGATCCTGCCAAGGCACCGCCTGTAAGATACATTCATAATCCTTTTTCTATTTGGACGTTGGATGGTTGTTGTAGCTAGCGTATCTGTTGATAATAAAGTAGTTGGCATCTAAAGAATGCTTCTTTTACACCTCTGGACAATTGTTAGTCAATGTATTTCTGAGAGTGTTGCTTCTGATAGTATGTTTATTGTATTTCAACCAGTAGTTGCAAGCTTTTGGAGATTCATGAAATGAAAATGGAAACAATATGTAACTATAGAAACCAAATCTTCAAAATCTATAATTTTAAGAAGGAAAGATCAATGTAACAATTAAAGTAGAAATGAAAATGAAATACAAGTGGATAGGGCCAATATAAAGGATTTAATAGTCAGGGAGGTTCGCATCATTCCCTTACCTGTTCTAAGGAGTGCTTCTTTTGCTCCTCTGGACAATTGTTTGGTCTGTTGCTTCTGATAGTGTGTGTATTTATGTACGTGTATCTGCGTTGAGCGTTGTTCAAAATCTTGGGAAGTATCCTAAATTGAAAGTGAAACATGTTGGTAAGGTACCTAGAATTTAGAGGACAGATGATATCACACCATTTAATGTATAAAATCAGAATCTCTTTGATTTTATATGCCTTGTTAGGAGCTTTATGTTCATGAAACATGAAGTTCCTAGCTTTGTACTTTGAGAGGGCTCTGGTTCTTCTTGCATAAATGTAGGCCTTTGAATGAAATGATTTTATCTTTGTGCTGCATCTACTCCTTTGAATGAAATGATTTTATCTTCTTGCATATATTTAGGCCTTTGAATGAAATGATTTTATCTTTGTTACCGTAGAAAATAAAGAATCTGCAGTTTTACCTTACATATTGTATTTACAAGCTTTCTCTGGTCATTTTTCTTTCATGTGGATGATTATCAGAAGAAATGGCTTTGCTGTATCCAAAGTCCCCCTGCTGAATCTTGAGAAGGTTCATTTAGAAGCCTCAGTTGGAAAACTTCATATTATTCTGTAATTGTCTGCTGTGGCTTCTCAAATACAATGAACTTTCATGGAGCCTTGATGGTCCTGCTAAATTTTATGCAATTTCATGTAAATCTGAGTGTTGTTGTTGTGGAGGAAAAAGTAAAGAAGACAAACATGTATTGTATTTATATTATTGATATGGTGGTTTTTTATTAGGAGATAAAGGTGCTATTCTGTCTTTGCCTTTGGTGTGAGCTGTAAAGCTTTGCACTGGACATCATGTATAATTGTGGCTGGTATAATTAATGTAATACAACTTTTGCTTTTTTTTCAACTAAGCCAACATTTGATGTCTGGCTTAGTTCTCCCATAACTCACAAACTTAGAGACACTTGAGAAAATAAAGTGTGTGTTTATTGTATCCCAA CAATTTTGTTATTCATCTTTGATTCAATGTTTTGATGTGTTGTTCGATCGGTTTGATTACTACTTTTGCTGAATTTCCGTTTTCTTGATTCGATTCGCCACTTTGATTTCTTTATTCGTTTGATTTCGCTAAGGATTGGTCAATTCTTCGCTTCTATGATTCCCACTTTGATGTGTTTATTCGTCTTCCTGAGATTCAAGTTGATAGATAGATTCTGTGCTTGTTATATTGGAGGGGCAGAAATCTGGATTTTCCTCGAGATTTAATTAGTTGTTGTAGGTCGTTTCTGAATCAGTAAATCCGTTTCTTGCAGTCCAATATGAGATGTATTTGGATTAACTGGTGTTGGAGGAAACTTCTTAATTGGTTTATTTTGTTTTGTTTGATTAATATCGGATTGAAGGACAAAGGTCGGCCACTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGTTTTACCGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGCCTGCAGCAGATCCTGCCAAGGCACCGCCTTTGGCATCTAAAGAATGCTTCTTTTACACCTCTGGACAATTGTTAGTCAATGTATTTCTGAGAGTGTTGCTTCTGATAGAGTGCTTCTTTTGCTCCTCTGGACAATTGTTTGGTCTGTTGCTTCTGATAGTGTGTGTATTTATGCCTTTGAATGAAATGATTTTATCTTTGTTACCAAGAAATGGCTTTGCTGTATCCAAAGTCCCCCTGCTGAATCTTGAGAAGGTTCATTTAGAAGCCTCAGTTGGAAAACTTCATATTATTCTGTAATTGTCTGCTGTGGCTTCTCAAATACAATGAACTTTCATGGAGCCTTGATGGTCCTGCTAAATTTTATGCAATTTCATGTAAATCTGAGTGTTGTTGTTGTGGAGGAAAAAGTAAAGAAGACAAACATGTATTGTATTTATATTATTGATATGGTGGTTTTTTATTAGGAGATAAAGGTGCTATTCTGTCTTTGCCTTTGGTGTGAGCTGTAAAGCTTTGCACTGGACATCATGTATAATTGTGGCTGGTATAATTAATGTAATACAACTTTTGCTTTTTTTTCAACTAAGCCAACATTTGATGTCTGGCTTAGTTCTCCCATAACTCACAAACTTAGAGACACTTGAGAAAATAAAGTGTGTGTTTATTGTATCCCAA ATGAGATGTATTTGGATTAACTGGTGTTGGAGGAAACTTCTTAATTGGTTTATTTTGTTTTGTTTGATTAATATCGGATTGAAGGACAAAGGTCGGCCACTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCAGCTGAGGGTTTTACCGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGCCTGCAGCAGATCCTGCCAAGGCACCGCCTTTGGCATCTAAAGAATGCTTCTTTTACACCTCTGGACAATTGTTAGTCAATGTATTTCTGAGAGTGTTGCTTCTGATAGAGTGCTTCTTTTGCTCCTCTGGACAATTGTTTGGTCTGTTGCTTCTGATAGTGTGTGTATTTATGCCTTTGAATGAAATGATTTTATCTTTGTTACCAAGAAATGGCTTTGCTGTATCCAAAGTCCCCCTGCTGAATCTTGAGAAGGTTCATTTAGAAGCCTCAGTTGGAAAACTTCATATTATTCTGTAA MRCIWINWCWRKLLNWFILFCLINIGLKDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRPAADPAKAPPLASKECFFYTSGQLLVNVFLRVLLLIECFFCSSGQLFGLLLLIVCVFMPLNEMILSLLPRNGFAVSKVPLLNLEKVHLEASVGKLHIIL Homology
BLAST of CaUC09G177850 vs. NCBI nr
Match: KAE8645904.1 (hypothetical protein Csa_011859 [Cucumis sativus]) HSP 1 Score: 149.4 bits (376), Expect = 2.9e-32 Identity = 90/150 (60.00%), Postives = 93/150 (62.00%), Query Frame = 0
BLAST of CaUC09G177850 vs. NCBI nr
Match: XP_038897827.1 (protein NOI4 [Benincasa hispida]) HSP 1 Score: 133.3 bits (334), Expect = 2.1e-27 Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of CaUC09G177850 vs. NCBI nr
Match: XP_008463014.1 (PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo]) HSP 1 Score: 129.0 bits (323), Expect = 4.0e-26 Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0
BLAST of CaUC09G177850 vs. NCBI nr
Match: KAA0048284.1 (RPM1-interacting protein 4-like isoform X2 [Cucumis melo var. makuwa] >TYK07977.1 RPM1-interacting protein 4-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 128.3 bits (321), Expect = 6.8e-26 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of CaUC09G177850 vs. NCBI nr
Match: XP_008463015.1 (PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo]) HSP 1 Score: 128.3 bits (321), Expect = 6.8e-26 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of CaUC09G177850 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.7e-19 Identity = 48/65 (73.85%), Postives = 52/65 (80.00%), Query Frame = 0
BLAST of CaUC09G177850 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.1e-06 Identity = 26/74 (35.14%), Postives = 40/74 (54.05%), Query Frame = 0
BLAST of CaUC09G177850 vs. ExPASy TrEMBL
Match: A0A0A0K6Y6 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G127370 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.1e-32 Identity = 90/152 (59.21%), Postives = 94/152 (61.84%), Query Frame = 0
BLAST of CaUC09G177850 vs. ExPASy TrEMBL
Match: A0A1S3CI83 (RPM1-interacting protein 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501257 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.9e-26 Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0
BLAST of CaUC09G177850 vs. ExPASy TrEMBL
Match: A0A5A7TZ14 (RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001080 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 3.3e-26 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of CaUC09G177850 vs. ExPASy TrEMBL
Match: A0A1S3CI91 (RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501257 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 3.3e-26 Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of CaUC09G177850 vs. ExPASy TrEMBL
Match: A0A6J1CEA3 (RPM1-interacting protein 4 OS=Momordica charantia OX=3673 GN=LOC111010436 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 5.6e-26 Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of CaUC09G177850 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 99.4 bits (246), Expect = 3.2e-21 Identity = 52/86 (60.47%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of CaUC09G177850 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 99.4 bits (246), Expect = 3.2e-21 Identity = 52/85 (61.18%), Postives = 59/85 (69.41%), Query Frame = 0
BLAST of CaUC09G177850 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20 Identity = 48/64 (75.00%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of CaUC09G177850 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 91.7 bits (226), Expect = 6.6e-19 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 0
BLAST of CaUC09G177850 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12 Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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