Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCGGCCAATTTTCCGGCGAAATTTCTGGCTCTGGTTGTCGTTTTCCACCTCAACTCCGCCGTCTCCGCCACCGACGACGCTGCCATGGCCACACCCATTTCCTGCGACAACTGCACCATTTGTCAATCCGCCTGCCGCCCACCGCCGTACGAGCCACTGCCACTCTCGCCGCCACCGCCGCCGCCGTTTGCAGAGCCAGAGCCACTGCCGGTTCCAGTTGCTCCTGCGAACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCGCAAGCGACGGCGGTGAATGGTAATATATATACACCGATTTATAATGAGTCGTCTTCTTCGTTTTTGAAAGTTGGGTTGGCCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCATTTTCTGA
mRNA sequence
ATGTTTCCGGCCAATTTTCCGGCGAAATTTCTGGCTCTGGTTGTCGTTTTCCACCTCAACTCCGCCGTCTCCGCCACCGACGACGCTGCCATGGCCACACCCATTTCCTGCGACAACTGCACCATTTGTCAATCCGCCTGCCGCCCACCGCCGTACGAGCCACTGCCACTCTCGCCGCCACCGCCGCCGCCGTTTGCAGAGCCAGAGCCACTGCCGGTTCCAGTTGCTCCTGCGAACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCGCAAGCGACGGCGGTGAATGGTAATATATATACACCGATTTATAATGAGTCGTCTTCTTCGTTTTTGAAAGTTGGGTTGGCCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCATTTTCTGA
Coding sequence (CDS)
ATGTTTCCGGCCAATTTTCCGGCGAAATTTCTGGCTCTGGTTGTCGTTTTCCACCTCAACTCCGCCGTCTCCGCCACCGACGACGCTGCCATGGCCACACCCATTTCCTGCGACAACTGCACCATTTGTCAATCCGCCTGCCGCCCACCGCCGTACGAGCCACTGCCACTCTCGCCGCCACCGCCGCCGCCGTTTGCAGAGCCAGAGCCACTGCCGGTTCCAGTTGCTCCTGCGAACTGCCCTCCCACCATTGTCCAGTGCTGTCAGTTTCTTCCGCCGCCGCCGCCGCAAGCGACGGCGGTGAATGGTAATATATATACACCGATTTATAATGAGTCGTCTTCTTCGTTTTTGAAAGTTGGGTTGGCCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCATTTTCTGA
Protein sequence
MFPANFPAKFLALVVVFHLNSAVSATDDAAMATPISCDNCTICQSACRPPPYEPLPLSPPPPPPFAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPQATAVNGNIYTPIYNESSSSFLKVGLASVLAPVFGLAAIF
Homology
BLAST of CaUC09G177810 vs. NCBI nr
Match:
XP_008463043.1 (PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis melo])
HSP 1 Score: 218.8 bits (556), Expect = 2.9e-53
Identity = 118/136 (86.76%), Postives = 122/136 (89.71%), Query Frame = 0
Query: 6 FPAKFLALVVVFHLNSAVSATDDAAMATPISCDNCTICQSACRPPPYEPLPLSPPPPP-- 65
FPAK LALVVVF+LNSAVSATDDAAMATPISCDNCTICQS CRPP EPLPL PPPPP
Sbjct: 2 FPAKLLALVVVFNLNSAVSATDDAAMATPISCDNCTICQSTCRPPQSEPLPLLPPPPPPP 61
Query: 66 -PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAVNGNIYTPIYNESSSSFLKV 125
P+AEPEPLP+PVAPANCPPTIVQCCQFL PPPPPQATA NGNIYTPIYNESSSSFL+V
Sbjct: 62 APYAEPEPLPIPVAPANCPPTIVQCCQFLPPPPPPPQATAGNGNIYTPIYNESSSSFLRV 121
Query: 126 GLASVLAPVFGLAAIF 137
GL S LAPVFGL AIF
Sbjct: 122 GLGSALAPVFGLVAIF 137
BLAST of CaUC09G177810 vs. NCBI nr
Match:
KGN44024.1 (hypothetical protein Csa_011878 [Cucumis sativus])
HSP 1 Score: 209.5 bits (532), Expect = 1.8e-50
Identity = 115/135 (85.19%), Postives = 120/135 (88.89%), Query Frame = 0
Query: 6 FPAKFLALVVVFHLNSAVSATDDAAMATPISCDNCTICQSACRPPPYE--PLPLSPPPPP 65
FPAK LALVVVF+LN+AVSATDDAAM TPISCDNCTICQS C PPP E PLPLSPPPP
Sbjct: 45 FPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLPLPLSPPPPS 104
Query: 66 PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAVNGNIYTPIYNESSSSFLKVG 125
P+AEPEPLP PVAPANCPPTIVQCCQFL PPPPPQATAVNGN+YTPIYN SSSSFL+VG
Sbjct: 105 PYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYN-SSSSFLRVG 164
Query: 126 LASVLAPVFGLAAIF 137
L S LAPVFGL AIF
Sbjct: 165 LGSALAPVFGLLAIF 178
BLAST of CaUC09G177810 vs. NCBI nr
Match:
XP_011659730.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus])
HSP 1 Score: 209.5 bits (532), Expect = 1.8e-50
Identity = 115/135 (85.19%), Postives = 120/135 (88.89%), Query Frame = 0
Query: 6 FPAKFLALVVVFHLNSAVSATDDAAMATPISCDNCTICQSACRPPPYE--PLPLSPPPPP 65
FPAK LALVVVF+LN+AVSATDDAAM TPISCDNCTICQS C PPP E PLPLSPPPP
Sbjct: 2 FPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLPLPLSPPPPS 61
Query: 66 PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAVNGNIYTPIYNESSSSFLKVG 125
P+AEPEPLP PVAPANCPPTIVQCCQFL PPPPPQATAVNGN+YTPIYN SSSSFL+VG
Sbjct: 62 PYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYN-SSSSFLRVG 121
Query: 126 LASVLAPVFGLAAIF 137
L S LAPVFGL AIF
Sbjct: 122 LGSALAPVFGLLAIF 135
BLAST of CaUC09G177810 vs. NCBI nr
Match:
KAG7037325.1 (hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 186.4 bits (472), Expect = 1.6e-43
Identity = 97/130 (74.62%), Postives = 105/130 (80.77%), Query Frame = 0
Query: 7 PAKFLALVVVFHLNSAVSATDDAAMATPISCDNCTICQSACRPPPYEPLPLSPPPPPPFA 66
PAKFLALV+VFHL SA++A DDA+M TP SC+NC +CQSACRPPP L PPPPPP A
Sbjct: 3 PAKFLALVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPLLPPPPPPPIA 62
Query: 67 EPEPLPVPVAPANCPPTIVQCCQFLPPPPPQATAVNGNIYTPIYNESSSSFLKVGLASVL 126
EPEPLPVPV PANCPPTIVQCCQF+PPP P NIYTP YNES SSFLK GL SVL
Sbjct: 63 EPEPLPVPVPPANCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVSVL 122
Query: 127 APVFGLAAIF 137
APVFG+AAIF
Sbjct: 123 APVFGVAAIF 132
BLAST of CaUC09G177810 vs. NCBI nr
Match:
KAG6607747.1 (hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 184.9 bits (468), Expect = 4.7e-43
Identity = 96/130 (73.85%), Postives = 104/130 (80.00%), Query Frame = 0
Query: 7 PAKFLALVVVFHLNSAVSATDDAAMATPISCDNCTICQSACRPPPYEPLPLSPPPPPPFA 66
PAKFLALV+VFHL SA++A DDA+M TP SC+NC +CQSACRPPP L PPPPPP A
Sbjct: 3 PAKFLALVIVFHLKSAITAADDASMPTPTSCENCALCQSACRPPPDAQPLLPPPPPPPIA 62
Query: 67 EPEPLPVPVAPANCPPTIVQCCQFLPPPPPQATAVNGNIYTPIYNESSSSFLKVGLASVL 126
EPEPLPVPV P NCPPTIVQCCQF+PPP P NIYTP YNES SSFLK GL SVL
Sbjct: 63 EPEPLPVPVPPGNCPPTIVQCCQFMPPPAPPPPPNGNNIYTPFYNESCSSFLKRGLVSVL 122
Query: 127 APVFGLAAIF 137
APVFG+AAIF
Sbjct: 123 APVFGVAAIF 132
BLAST of CaUC09G177810 vs. ExPASy TrEMBL
Match:
A0A1S3CI95 (sperm mitochondrial-associated cysteine-rich protein-like OS=Cucumis melo OX=3656 GN=LOC103501284 PE=4 SV=1)
HSP 1 Score: 218.8 bits (556), Expect = 1.4e-53
Identity = 118/136 (86.76%), Postives = 122/136 (89.71%), Query Frame = 0
Query: 6 FPAKFLALVVVFHLNSAVSATDDAAMATPISCDNCTICQSACRPPPYEPLPLSPPPPP-- 65
FPAK LALVVVF+LNSAVSATDDAAMATPISCDNCTICQS CRPP EPLPL PPPPP
Sbjct: 2 FPAKLLALVVVFNLNSAVSATDDAAMATPISCDNCTICQSTCRPPQSEPLPLLPPPPPPP 61
Query: 66 -PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAVNGNIYTPIYNESSSSFLKV 125
P+AEPEPLP+PVAPANCPPTIVQCCQFL PPPPPQATA NGNIYTPIYNESSSSFL+V
Sbjct: 62 APYAEPEPLPIPVAPANCPPTIVQCCQFLPPPPPPPQATAGNGNIYTPIYNESSSSFLRV 121
Query: 126 GLASVLAPVFGLAAIF 137
GL S LAPVFGL AIF
Sbjct: 122 GLGSALAPVFGLVAIF 137
BLAST of CaUC09G177810 vs. ExPASy TrEMBL
Match:
A0A0A0K536 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G111300 PE=4 SV=1)
HSP 1 Score: 209.5 bits (532), Expect = 8.6e-51
Identity = 115/135 (85.19%), Postives = 120/135 (88.89%), Query Frame = 0
Query: 6 FPAKFLALVVVFHLNSAVSATDDAAMATPISCDNCTICQSACRPPPYE--PLPLSPPPPP 65
FPAK LALVVVF+LN+AVSATDDAAM TPISCDNCTICQS C PPP E PLPLSPPPP
Sbjct: 45 FPAKLLALVVVFNLNTAVSATDDAAMPTPISCDNCTICQSTCSPPPSEPLPLPLSPPPPS 104
Query: 66 PFAEPEPLPVPVAPANCPPTIVQCCQFL--PPPPPQATAVNGNIYTPIYNESSSSFLKVG 125
P+AEPEPLP PVAPANCPPTIVQCCQFL PPPPPQATAVNGN+YTPIYN SSSSFL+VG
Sbjct: 105 PYAEPEPLPFPVAPANCPPTIVQCCQFLPPPPPPPQATAVNGNVYTPIYN-SSSSFLRVG 164
Query: 126 LASVLAPVFGLAAIF 137
L S LAPVFGL AIF
Sbjct: 165 LGSALAPVFGLLAIF 178
BLAST of CaUC09G177810 vs. ExPASy TrEMBL
Match:
W9QFT0 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018218 PE=4 SV=1)
HSP 1 Score: 54.7 bits (130), Expect = 3.5e-04
Identity = 42/115 (36.52%), Postives = 56/115 (48.70%), Query Frame = 0
Query: 30 AMATPISCDNCTICQSACRPPPYEPLPL--SPPPPPPFAEPEPLPVPVAP------ANCP 89
A+ +P C NCT+CQ C PP P +PPPPPP P +P+ P CP
Sbjct: 29 ALPSPTPCFNCTMCQYPCLSPPASGNPSYGAPPPPPPELPGLPADIPLPPPQQPWQGKCP 88
Query: 90 PTIVQCCQFLPPPPPQATAVNGNIYTPIYNESSSSFLKVGLASVLAPVFGLAAIF 137
PT +QCCQ+ PPPP +Y P YN + L + L ++ +F A F
Sbjct: 89 PTPIQCCQYTPPPP-------YGVYVP-YNHALPCSLPIFLYVIMMLLFSSAVTF 135
BLAST of CaUC09G177810 vs. ExPASy TrEMBL
Match:
A0A6A1VX00 (4Fe-4S ferredoxin-type domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR4G016275 PE=4 SV=1)
HSP 1 Score: 54.3 bits (129), Expect = 4.6e-04
Identity = 55/141 (39.01%), Postives = 66/141 (46.81%), Query Frame = 0
Query: 20 NSAVSATDDAA---MATPISCDNCTICQSACRPP----PYEPL----PLSPPPPPPFAE- 79
N SAT +A+ + +P +C NCT+CQ C P P PL PL PPPPP AE
Sbjct: 18 NLGCSATGEASGDVLPSPSACTNCTLCQYPCHTPAPPLPDYPLYGTPPLPPPPPPSLAEY 77
Query: 80 ---------PEPLPVP---VAPANCPP-TIVQCCQFLPPPPPQATAVNGNIYTPIYNESS 136
P P P P A NCPP T+VQCCQ+ PPP A Y P N S+
Sbjct: 78 PPYETSSPPPPPPPPPSQLPAQGNCPPTTVVQCCQY---PPPIAYG-----YVPYNNYSA 137
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008463043.1 | 2.9e-53 | 86.76 | PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis me... | [more] |
KGN44024.1 | 1.8e-50 | 85.19 | hypothetical protein Csa_011878 [Cucumis sativus] | [more] |
XP_011659730.1 | 1.8e-50 | 85.19 | leucine-rich repeat extensin-like protein 3 [Cucumis sativus] | [more] |
KAG7037325.1 | 1.6e-43 | 74.62 | hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6607747.1 | 4.7e-43 | 73.85 | hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3CI95 | 1.4e-53 | 86.76 | sperm mitochondrial-associated cysteine-rich protein-like OS=Cucumis melo OX=365... | [more] |
A0A0A0K536 | 8.6e-51 | 85.19 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G111300 PE=4 SV=1 | [more] |
W9QFT0 | 3.5e-04 | 36.52 | Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018218 PE=4 SV=1 | [more] |
A0A6A1VX00 | 4.6e-04 | 39.01 | 4Fe-4S ferredoxin-type domain-containing protein OS=Morella rubra OX=262757 GN=C... | [more] |
Match Name | E-value | Identity | Description | |