CaUC09G177710 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATCGTCAAGGAAAGAGGAGCTCCAAAACACCCATTATCAAAGGCCTAAATGCTTCGGTTCGACCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACCAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACGATCATAGATCGTTACACTATTATGAATCACTATGCTAGCAGCACTTCTGGAAGCAATAGCTTTAGTTCTCGGGGTGCAGGATCGCCGTTATCACCACTTTCGGCTATTGAGAATTTGGAAACACCGCGTGTAAGGTCTCCACAAATCTATGGAACCCCGGTGAAGGTCGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAATTCAATCCCTGGAGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTCATCAGGCAAAAATCAATACAGAACGGACATTTGCCGCTACTGGGAGGATTCTGGAAGCTGCCGCTTTGGCCACAAATGCCAGGTTAGTTATTTCGTTCGACCCCACCATAATGATCTGATCTGAATTATTGGCTCCGCGAATTTATTGGCCACAATGCGGTATCTTTGTTTATTGCTTAAAAGACACCTTTCCTCTGCCTTGAGATTTGATTGCTAATGAGACAAATGGATAAAAAAGATATTTACTATTTCAAGGAATAGTCCGATTAAAGATTTGCCGTTCCTGTTCAAGTTTAATGGGTGAACTTTTAGACTGAATTATTTATTTATTATTTAATGTGGGCTAATTTTCCATTTATTCTTGTTTCATGTGGGTAGATTGAATTTATTTATTCTTTAAAATAGCTTGATTGAAATAAATTGACGCATTAAGAGAGTGATACATGATGAGTCAATGTCTCTTAGGCAAGGTTTTATGAGAAAGTTCGGAGGCTGATTCAAGGATGGAATATATATCCCACTCCCAATTATGTTTAGAATTTGGTCTCAGACAATGAACTCAGTTCAAATTAGTTTTTATAGATCGAGCGAAATATTAGGTTGGCTGCCAAAATTGATGCACTTGTGTAATATCACACCAAGTTATTAGATTAGCAGATAAATGAACCTATACCTTTTTCAAAAGTTGGATTAATCATAGACTCTGGCATCCCCGACATTCCCTTTCAGTTGTTGGATTGAATACCAACATTGAGTTTATTTTTTGGACCATTTCTCGATTTGTGTGTCATCCTTGCGCAGGGACCAACATTGAGTTTGTTAGAGCATCATTATTCATGACACGAATTCAAAGCTAAATAAAACACAACACAACTAACTTCCAGTATCTATCAATCAACGACATCGCGTGCTCTAGATTTCTAATAATGGATATTATTCAATTTCTTTGGTATTATCATTCAATCTTGGGGGACGGGAACTTGGGATTGGATCCTCCTATTTAATACTTTTAAGTAATTAGGTTGGCTGATTTTATTCCAAAAATAGGACCAAAAGCTTGCATTTCTCAATTTTTTTTTTATGATCCATATATAAGCTAAAAACTTTAAACTTGATAGAATTTGAGTCCAATGATCTTAACGGTAAGTAATTAAATATTTTCTTTAGTTACTCACTTCATTATCCATTCACCGAAAAGTTTGGGGTCCTTTGTAATTTATTCTGTAATTTATGGTATATATAGAAAAAAAAAAGTTTGTAATTAAAACCTCAACTATTTTGACACCGTAAAACTATCATTAAACTCAAAAGTTCAGCGTTATATGTTAAATTGTGATTTACATGTCAGAGCATGTTAAATTGATTGATATGCCTTCTCTGTTTACAGTTTGCGCATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCAGTTAGAACCAAGCCTAAGGTACCATTGACATCTGATAAATTAAATATACTGCAGGTTTTGTTAGGATAAAAGACACTTTCAGATTTGCATATTCTTCGCTACTACAGTTCAATGAAGCGTATGGTCTCAAGTCTCGCAACAGTCATTCACTAACAGGAATAGCTGCAACAAAAACACAATCAAACTCAGTAGATACAATCACCAAAACTGAAATTAGCAAAAGAGGTGTTACTACAACGCCGTCCTCGACTTCAGTACGTCACATGAACATTAAGCCAAGCCTTATTTCCACCATTTCCATCATTGATTGGTCACCTGAAGATGATGGCATTAAAATTGTTGTCCCCAAAACAGAGTCCACAAAAAGAGAAGATGTAAACCAACACATCCATGGAGTTCTTTATGGTTCCACCACTGAGATGACCAAAAAAAGACTCCCAGTTTTCACTCAACTCTGCTCTGGAAAACTCCAACAAGAATAAGCAGCACCAAGCTTTTTCCCATCATTCTCTTAAAACCTACTTCTCTAATTGGTTACACCATTTTTGTTTAGAAACACTCAGTCAACTTTGTAATAGGAGCTTTCATGGGTCATATAGTACTCATCAGTAATAAAC ATGGAAGATCGTCAAGGAAAGAGGAGCTCCAAAACACCCATTATCAAAGGCCTAAATGCTTCGGTTCGACCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACCAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACGATCATAGATCGTTACACTATTATGAATCACTATGCTAGCAGCACTTCTGGAAGCAATAGCTTTAGTTCTCGGGGTGCAGGATCGCCGTTATCACCACTTTCGGCTATTGAGAATTTGGAAACACCGCGTGTAAGGTCTCCACAAATCTATGGAACCCCGGTGAAGGTCGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAATTCAATCCCTGGAGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTCATCAGGCAAAAATCAATACAGAACGGACATTTGCCGCTACTGGGAGGATTCTGGAAGCTGCCGCTTTGGCCACAAATGCCAGTTTGCGCATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCAGTTAGAACCAAGCCTAAGTTCAATGAAGCGTATGGTCTCAAGTCTCGCAACAGTCATTCACTAACAGGAATAGCTGCAACAAAAACACAATCAAACTCAGTAGATACAATCACCAAAACTGAAATTAGCAAAAGAGGTGTTACTACAACGCCGTCCTCGACTTCAGTACGTCACATGAACATTAAGCCAAGCCTTATTTCCACCATTTCCATCATTGATTGGTCACCTGAAGATGATGGCATTAAAATTGTTGTCCCCAAAACAGAGTCCACAAAAAGAGAAGATGTAAACCAACACATCCATGGAGTTCTTTATGGTTCCACCACTGAGATGACCAAAAAAAGACTCCCAGTTTTCACTCAACTCTGCTCTGGAAAACTCCAACAAGAATAAGCAGCACCAAGCTTTTTCCCATCATTCTCTTAAAACCTACTTCTCTAATTGGTTACACCATTTTTGTTTAGAAACACTCAGTCAACTTTGTAATAGGAGCTTTCATGGGTCATATAGTACTCATCAGTAATAAAC ATGGAAGATCGTCAAGGAAAGAGGAGCTCCAAAACACCCATTATCAAAGGCCTAAATGCTTCGGTTCGACCGATCAACATTCAAATGGACAATCACTTGGTAATTGGGGGAACCAGACACTATCACCAGGAAACAAACTGTAAAAGTCCGACGATCATAGATCGTTACACTATTATGAATCACTATGCTAGCAGCACTTCTGGAAGCAATAGCTTTAGTTCTCGGGGTGCAGGATCGCCGTTATCACCACTTTCGGCTATTGAGAATTTGGAAACACCGCGTGTAAGGTCTCCACAAATCTATGGAACCCCGGTGAAGGTCGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAATTCAATCCCTGGAGGAGCGAAGACAGTGAGGTCTCCTTTAGATTCTGGAAGTGGTGGAGGTTTGTCATCAGGCAAAAATCAATACAGAACGGACATTTGCCGCTACTGGGAGGATTCTGGAAGCTGCCGCTTTGGCCACAAATGCCAGTTTGCGCATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCAGTTAGAACCAAGCCTAAGTTCAATGAAGCGTATGGTCTCAAGTCTCGCAACAGTCATTCACTAACAGGAATAGCTGCAACAAAAACACAATCAAACTCAGTAGATACAATCACCAAAACTGAAATTAGCAAAAGAGGTGTTACTACAACGCCGTCCTCGACTTCAGTACGTCACATGAACATTAAGCCAAGCCTTATTTCCACCATTTCCATCATTGATTGGTCACCTGAAGATGATGGCATTAAAATTGTTGTCCCCAAAACAGAGTCCACAAAAAGAGAAGATGTAAACCAACACATCCATGGAGTTCTTTATGGTTCCACCACTGAGATGACCAAAAAAAGACTCCCAGTTTTCACTCAACTCTGCTCTGGAAAACTCCAACAAGAATAA MEDRQGKRSSKTPIIKGLNASVRPINIQMDNHLVIGGTRHYHQETNCKSPTIIDRYTIMNHYASSTSGSNSFSSRGAGSPLSPLSAIENLETPRVRSPQIYGTPVKVDEEVIVMDGILINSIPGGAKTVRSPLDSGSGGGLSSGKNQYRTDICRYWEDSGSCRFGHKCQFAHGKEDLRPGRLPVRTKPKFNEAYGLKSRNSHSLTGIAATKTQSNSVDTITKTEISKRGVTTTPSSTSVRHMNIKPSLISTISIIDWSPEDDGIKIVVPKTESTKREDVNQHIHGVLYGSTTEMTKKRLPVFTQLCSGKLQQE Homology
BLAST of CaUC09G177710 vs. NCBI nr
Match: XP_038897010.1 (uncharacterized protein LOC120085195 [Benincasa hispida] >XP_038897011.1 uncharacterized protein LOC120085195 [Benincasa hispida]) HSP 1 Score: 550.1 bits (1416), Expect = 1.3e-152 Identity = 279/314 (88.85%), Postives = 292/314 (92.99%), Query Frame = 0
BLAST of CaUC09G177710 vs. NCBI nr
Match: XP_004148935.1 (uncharacterized protein LOC101215865 [Cucumis sativus] >XP_011658933.1 uncharacterized protein LOC101215865 [Cucumis sativus] >XP_031744249.1 uncharacterized protein LOC116404958 [Cucumis sativus] >XP_031744250.1 uncharacterized protein LOC116404958 [Cucumis sativus] >KAE8645918.1 hypothetical protein Csa_011889 [Cucumis sativus]) HSP 1 Score: 504.6 bits (1298), Expect = 6.1e-139 Identity = 262/316 (82.91%), Postives = 280/316 (88.61%), Query Frame = 0
BLAST of CaUC09G177710 vs. NCBI nr
Match: TYK07952.1 (tristetraprolin-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 491.1 bits (1263), Expect = 7.0e-135 Identity = 259/327 (79.20%), Postives = 278/327 (85.02%), Query Frame = 0
BLAST of CaUC09G177710 vs. NCBI nr
Match: XP_022154583.1 (uncharacterized protein LOC111021811 [Momordica charantia] >XP_022154584.1 uncharacterized protein LOC111021811 [Momordica charantia]) HSP 1 Score: 426.0 bits (1094), Expect = 2.8e-115 Identity = 232/363 (63.91%), Postives = 264/363 (72.73%), Query Frame = 0
BLAST of CaUC09G177710 vs. NCBI nr
Match: XP_023536031.1 (uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023536040.1 uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 400.6 bits (1028), Expect = 1.2e-107 Identity = 226/360 (62.78%), Postives = 255/360 (70.83%), Query Frame = 0
BLAST of CaUC09G177710 vs. ExPASy Swiss-Prot
Match: P47974 (mRNA decay activator protein ZFP36L2 OS=Homo sapiens OX=9606 GN=ZFP36L2 PE=1 SV=3) HSP 1 Score: 55.8 bits (133), Expect = 9.9e-07 Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 0
BLAST of CaUC09G177710 vs. ExPASy Swiss-Prot
Match: Q5ISE2 (mRNA decay activator protein ZFP36L3 OS=Mus musculus OX=10090 GN=Zfp36l3 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06 Identity = 21/42 (50.00%), Postives = 31/42 (73.81%), Query Frame = 0
BLAST of CaUC09G177710 vs. ExPASy Swiss-Prot
Match: P47979 (Zinc finger protein zfs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=zfs1 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06 Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 0
BLAST of CaUC09G177710 vs. ExPASy Swiss-Prot
Match: P47980 (Protein TIS11 OS=Drosophila melanogaster OX=7227 GN=Tis11 PE=2 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 4.9e-06 Identity = 24/59 (40.68%), Postives = 37/59 (62.71%), Query Frame = 0
BLAST of CaUC09G177710 vs. ExPASy Swiss-Prot
Match: P23949 (mRNA decay activator protein ZFP36L2 OS=Mus musculus OX=10090 GN=Zfp36l2 PE=1 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 4.9e-06 Identity = 20/41 (48.78%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of CaUC09G177710 vs. ExPASy TrEMBL
Match: A0A5D3C9H3 (Tristetraprolin-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00710 PE=4 SV=1) HSP 1 Score: 491.1 bits (1263), Expect = 3.4e-135 Identity = 259/327 (79.20%), Postives = 278/327 (85.02%), Query Frame = 0
BLAST of CaUC09G177710 vs. ExPASy TrEMBL
Match: A0A6J1DKP7 (uncharacterized protein LOC111021811 OS=Momordica charantia OX=3673 GN=LOC111021811 PE=4 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 1.3e-115 Identity = 232/363 (63.91%), Postives = 264/363 (72.73%), Query Frame = 0
BLAST of CaUC09G177710 vs. ExPASy TrEMBL
Match: A0A6J1IEX1 (uncharacterized protein LOC111472616 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472616 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 8.7e-107 Identity = 223/360 (61.94%), Postives = 254/360 (70.56%), Query Frame = 0
BLAST of CaUC09G177710 vs. ExPASy TrEMBL
Match: A0A0A0K529 (C3H1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G103290 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 8.7e-107 Identity = 210/258 (81.40%), Postives = 225/258 (87.21%), Query Frame = 0
BLAST of CaUC09G177710 vs. ExPASy TrEMBL
Match: A0A6J1ICU5 (uncharacterized protein LOC111472626 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472626 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 1.1e-106 Identity = 223/360 (61.94%), Postives = 254/360 (70.56%), Query Frame = 0
BLAST of CaUC09G177710 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.5e-05 Identity = 24/61 (39.34%), Postives = 32/61 (52.46%), Query Frame = 0
BLAST of CaUC09G177710 vs. TAIR 10
Match: AT1G66810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.5e-05 Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of CaUC09G177710 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 47.0 bits (110), Expect = 3.3e-05 Identity = 23/65 (35.38%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of CaUC09G177710 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein ) HSP 1 Score: 47.0 bits (110), Expect = 3.3e-05 Identity = 23/65 (35.38%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of CaUC09G177710 vs. TAIR 10
Match: AT1G01350.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein ) HSP 1 Score: 43.9 bits (102), Expect = 2.8e-04 Identity = 24/81 (29.63%), Postives = 43/81 (53.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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