Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCTCCTCTGTAATGCTCTCCTCGTTTTCCTCGCAAATTACTCTGGTCTCTTCAAATCTTTGTCTTCTTCCCCAAAGAACTTTGACCCAAATTTCAGACTCTTTGACTTTGGCCTTGACTTCCTTCATCAGAAACCACCATTGATTCACTCTGAAACTGCAGAAGAAAAGAAAGATGACCCACAAGAAAACAGAGCAAATTTGCAAGAAGAAGAAGAAAAAGAAGATGAAGATGAAGATGAAGATGAAGAAATGTTAGTGGAGAGGTTTTTTGGAGGTGAAACAGGGGAACTTGAGGAGATGATAGAAGAGGAAGAAGAAGGGAATTGTGGAGTGATGAGTGATGAAGAATTGAATAGAAAGTTTGATGAATTCATCAAAAGAATGAAGGAAGAAATCATTCTAGATGATGCTCCAAGGACTCTAGTTGTAGTTTGA
mRNA sequence
ATGTTCCTCCTCTGTAATGCTCTCCTCGTTTTCCTCGCAAATTACTCTGGTCTCTTCAAATCTTTGTCTTCTTCCCCAAAGAACTTTGACCCAAATTTCAGACTCTTTGACTTTGGCCTTGACTTCCTTCATCAGAAACCACCATTGATTCACTCTGAAACTGCAGAAGAAAAGAAAGATGACCCACAAGAAAACAGAGCAAATTTGCAAGAAGAAGAAGAAAAAGAAGATGAAGATGAAGATGAAGATGAAGAAATGTTAGTGGAGAGGTTTTTTGGAGGTGAAACAGGGGAACTTGAGGAGATGATAGAAGAGGAAGAAGAAGGGAATTGTGGAGTGATGAGTGATGAAGAATTGAATAGAAAGTTTGATGAATTCATCAAAAGAATGAAGGAAGAAATCATTCTAGATGATGCTCCAAGGACTCTAGTTGTAGTTTGA
Coding sequence (CDS)
ATGTTCCTCCTCTGTAATGCTCTCCTCGTTTTCCTCGCAAATTACTCTGGTCTCTTCAAATCTTTGTCTTCTTCCCCAAAGAACTTTGACCCAAATTTCAGACTCTTTGACTTTGGCCTTGACTTCCTTCATCAGAAACCACCATTGATTCACTCTGAAACTGCAGAAGAAAAGAAAGATGACCCACAAGAAAACAGAGCAAATTTGCAAGAAGAAGAAGAAAAAGAAGATGAAGATGAAGATGAAGATGAAGAAATGTTAGTGGAGAGGTTTTTTGGAGGTGAAACAGGGGAACTTGAGGAGATGATAGAAGAGGAAGAAGAAGGGAATTGTGGAGTGATGAGTGATGAAGAATTGAATAGAAAGTTTGATGAATTCATCAAAAGAATGAAGGAAGAAATCATTCTAGATGATGCTCCAAGGACTCTAGTTGTAGTTTGA
Protein sequence
MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKDDPQENRANLQEEEEKEDEDEDEDEEMLVERFFGGETGELEEMIEEEEEGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Homology
BLAST of CaUC09G177640 vs. NCBI nr
Match:
XP_038896510.1 (uncharacterized protein LOC120084761 [Benincasa hispida])
HSP 1 Score: 224.6 bits (571), Expect = 5.7e-55
Identity = 123/146 (84.25%), Postives = 133/146 (91.10%), Query Frame = 0
Query: 1 MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKD 60
MF+LCNALLVFLANYSGLFKSLSSSPKNFDPNFR+FDFGLD L KPPLIHSE AEEKKD
Sbjct: 1 MFILCNALLVFLANYSGLFKSLSSSPKNFDPNFRIFDFGLDIL-PKPPLIHSEAAEEKKD 60
Query: 61 DPQENRANLQEEEEKEDEDEDEDEEMLVERFFGGETGELEEMIEEEEEGNCGVMSDEELN 120
DPQENR NLQEEE+ E+++ +ML E FFGGETGE+EE+IEEEEEGNCGV+SDEELN
Sbjct: 61 DPQENRPNLQEEEQ-----EEQETQMLGEMFFGGETGEVEEIIEEEEEGNCGVLSDEELN 120
Query: 121 RKFDEFIKRMKEEIILDDAPRTLVVV 147
RKFDEFIKRMKEEIILDDAPRTLVVV
Sbjct: 121 RKFDEFIKRMKEEIILDDAPRTLVVV 140
BLAST of CaUC09G177640 vs. NCBI nr
Match:
TYK07937.1 (uncharacterized protein E5676_scaffold265G00530 [Cucumis melo var. makuwa])
HSP 1 Score: 188.0 bits (476), Expect = 5.9e-44
Identity = 112/155 (72.26%), Postives = 119/155 (76.77%), Query Frame = 0
Query: 1 MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKD 60
MFLLCNALLVFLANYSGLFKSLSSSPK+ D NFR FDFGLD L QKP HSET EEKKD
Sbjct: 1 MFLLCNALLVFLANYSGLFKSLSSSPKHLDTNFRFFDFGLDLL-QKPSSTHSETPEEKKD 60
Query: 61 DPQENRANLQEEEEKEDEDEDEDEEMLVERFFGGETGELEEMI---------EEEEEGNC 120
D Q+N + +++EE EE L ER FG ETGE+ EMI EEEEEGNC
Sbjct: 61 DAQQNTPSFEQQEE---------EEALGERLFGSETGEVVEMIQAEEEEDDEEEEEEGNC 120
Query: 121 GVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 147
GVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Sbjct: 121 GVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 145
BLAST of CaUC09G177640 vs. NCBI nr
Match:
XP_008462992.1 (PREDICTED: uncharacterized protein LOC103501239 [Cucumis melo])
HSP 1 Score: 186.4 bits (472), Expect = 1.7e-43
Identity = 112/159 (70.44%), Postives = 119/159 (74.84%), Query Frame = 0
Query: 1 MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKD 60
MFLLCNALLVFLANYSGLFKSLSSSPK+ D NFR FDFGLD L QKP HSET EEKKD
Sbjct: 70 MFLLCNALLVFLANYSGLFKSLSSSPKHLDTNFRFFDFGLDLL-QKPSSTHSETPEEKKD 129
Query: 61 DPQENRANLQEEEEKEDEDEDEDEEMLVERFFGGETGELEEMI-------------EEEE 120
D Q+N + +++EE EE L ER FG ETGE+ EMI EEEE
Sbjct: 130 DAQQNTPSFEQQEE---------EEALGERLFGSETGEVVEMIQAEEEEEDDEEEEEEEE 189
Query: 121 EGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 147
EGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Sbjct: 190 EGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 218
BLAST of CaUC09G177640 vs. NCBI nr
Match:
KGN44005.1 (hypothetical protein Csa_018201 [Cucumis sativus])
HSP 1 Score: 177.9 bits (450), Expect = 6.1e-41
Identity = 109/153 (71.24%), Postives = 119/153 (77.78%), Query Frame = 0
Query: 1 MFLLCNALLVFLANYSGLFKSL----SSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAE 60
MFLLCNALLVFLANYSGLFKSL SSSPK+ D NFR FDFGLD L QKP IHSET E
Sbjct: 72 MFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLL-QKPSSIHSETPE 131
Query: 61 EKKDDPQENRANLQEEEEKEDEDEDEDEEMLVERFFGGETGELEEMI---EEEEEGNCGV 120
EKKDD +N NL++++++ E+L E FG ETGEL EMI EEE+E NCGV
Sbjct: 132 EKKDDALQNPPNLEQQQQQ--------AEVLGETLFGSETGELVEMIQEEEEEDEENCGV 191
Query: 121 MSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 147
MSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Sbjct: 192 MSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 215
BLAST of CaUC09G177640 vs. NCBI nr
Match:
XP_011659727.1 (uncharacterized protein LOC105436244 [Cucumis sativus])
HSP 1 Score: 177.9 bits (450), Expect = 6.1e-41
Identity = 109/153 (71.24%), Postives = 119/153 (77.78%), Query Frame = 0
Query: 1 MFLLCNALLVFLANYSGLFKSL----SSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAE 60
MFLLCNALLVFLANYSGLFKSL SSSPK+ D NFR FDFGLD L QKP IHSET E
Sbjct: 1 MFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLL-QKPSSIHSETPE 60
Query: 61 EKKDDPQENRANLQEEEEKEDEDEDEDEEMLVERFFGGETGELEEMI---EEEEEGNCGV 120
EKKDD +N NL++++++ E+L E FG ETGEL EMI EEE+E NCGV
Sbjct: 61 EKKDDALQNPPNLEQQQQQ--------AEVLGETLFGSETGELVEMIQEEEEEDEENCGV 120
Query: 121 MSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 147
MSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Sbjct: 121 MSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 144
BLAST of CaUC09G177640 vs. ExPASy TrEMBL
Match:
A0A5D3C7J6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00530 PE=4 SV=1)
HSP 1 Score: 188.0 bits (476), Expect = 2.9e-44
Identity = 112/155 (72.26%), Postives = 119/155 (76.77%), Query Frame = 0
Query: 1 MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKD 60
MFLLCNALLVFLANYSGLFKSLSSSPK+ D NFR FDFGLD L QKP HSET EEKKD
Sbjct: 1 MFLLCNALLVFLANYSGLFKSLSSSPKHLDTNFRFFDFGLDLL-QKPSSTHSETPEEKKD 60
Query: 61 DPQENRANLQEEEEKEDEDEDEDEEMLVERFFGGETGELEEMI---------EEEEEGNC 120
D Q+N + +++EE EE L ER FG ETGE+ EMI EEEEEGNC
Sbjct: 61 DAQQNTPSFEQQEE---------EEALGERLFGSETGEVVEMIQAEEEEDDEEEEEEGNC 120
Query: 121 GVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 147
GVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Sbjct: 121 GVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 145
BLAST of CaUC09G177640 vs. ExPASy TrEMBL
Match:
A0A1S3CI71 (uncharacterized protein LOC103501239 OS=Cucumis melo OX=3656 GN=LOC103501239 PE=4 SV=1)
HSP 1 Score: 186.4 bits (472), Expect = 8.4e-44
Identity = 112/159 (70.44%), Postives = 119/159 (74.84%), Query Frame = 0
Query: 1 MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAEEKKD 60
MFLLCNALLVFLANYSGLFKSLSSSPK+ D NFR FDFGLD L QKP HSET EEKKD
Sbjct: 70 MFLLCNALLVFLANYSGLFKSLSSSPKHLDTNFRFFDFGLDLL-QKPSSTHSETPEEKKD 129
Query: 61 DPQENRANLQEEEEKEDEDEDEDEEMLVERFFGGETGELEEMI-------------EEEE 120
D Q+N + +++EE EE L ER FG ETGE+ EMI EEEE
Sbjct: 130 DAQQNTPSFEQQEE---------EEALGERLFGSETGEVVEMIQAEEEEEDDEEEEEEEE 189
Query: 121 EGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 147
EGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Sbjct: 190 EGNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 218
BLAST of CaUC09G177640 vs. ExPASy TrEMBL
Match:
A0A0A0K300 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G098730 PE=4 SV=1)
HSP 1 Score: 177.9 bits (450), Expect = 3.0e-41
Identity = 109/153 (71.24%), Postives = 119/153 (77.78%), Query Frame = 0
Query: 1 MFLLCNALLVFLANYSGLFKSL----SSSPKNFDPNFRLFDFGLDFLHQKPPLIHSETAE 60
MFLLCNALLVFLANYSGLFKSL SSSPK+ D NFR FDFGLD L QKP IHSET E
Sbjct: 72 MFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLL-QKPSSIHSETPE 131
Query: 61 EKKDDPQENRANLQEEEEKEDEDEDEDEEMLVERFFGGETGELEEMI---EEEEEGNCGV 120
EKKDD +N NL++++++ E+L E FG ETGEL EMI EEE+E NCGV
Sbjct: 132 EKKDDALQNPPNLEQQQQQ--------AEVLGETLFGSETGELVEMIQEEEEEDEENCGV 191
Query: 121 MSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 147
MSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Sbjct: 192 MSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 215
BLAST of CaUC09G177640 vs. ExPASy TrEMBL
Match:
A0A6J1F6C4 (uncharacterized protein LOC111442742 OS=Cucurbita moschata OX=3662 GN=LOC111442742 PE=4 SV=1)
HSP 1 Score: 149.8 bits (377), Expect = 8.7e-33
Identity = 98/157 (62.42%), Postives = 111/157 (70.70%), Query Frame = 0
Query: 1 MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFG------LDFLHQKPPLIHSET 60
MFLLCNALLVFLANYSGLFKSLSSS ++FDP RL+DFG L QKPPLI +ET
Sbjct: 80 MFLLCNALLVFLANYSGLFKSLSSSSRSFDPCSRLYDFGPLSEPITTELVQKPPLIPTET 139
Query: 61 -AEEKKDDPQENRANLQEEEEKEDEDEDEDEEMLVERFFGGETGELEEMI----EEEEEG 120
A+EK DDP E + E E+++ L RFF ETGE+E+ EEEEEG
Sbjct: 140 AADEKNDDPDERIVSAPE------NGEEDESYGLAARFFAAETGEVEDTAAATEEEEEEG 199
Query: 121 NCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 147
N GV+SDEEL RKFDEFIKRMKEEI+LDDA RTLVVV
Sbjct: 200 NGGVLSDEELKRKFDEFIKRMKEEIVLDDATRTLVVV 230
BLAST of CaUC09G177640 vs. ExPASy TrEMBL
Match:
A0A6J1IEZ8 (uncharacterized protein LOC111475827 OS=Cucurbita maxima OX=3661 GN=LOC111475827 PE=4 SV=1)
HSP 1 Score: 148.3 bits (373), Expect = 2.5e-32
Identity = 100/158 (63.29%), Postives = 110/158 (69.62%), Query Frame = 0
Query: 1 MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFG------LDFLHQKPPLIHSE- 60
MFLLCNALLVFLANYSGLFKSLSSS ++FDP RL+DFG L QKPPLI +E
Sbjct: 61 MFLLCNALLVFLANYSGLFKSLSSSSRSFDPCSRLYDFGPLCEPITAELVQKPPLIPTEA 120
Query: 61 TAEEKKDDPQENRANLQEEEEKEDEDEDEDEEM-LVERFFGGETGELEE----MIEEEEE 120
A+EK DDP E + E E EDE L RFF ETGE+E+ EEEEE
Sbjct: 121 AADEKNDDPDERIVSAPENSE-------EDESYGLAARFFAAETGEVEDTTAAAAEEEEE 180
Query: 121 GNCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 147
GN GV+SDEEL RKFDEFIKRMKEEI+LDDA RTLVVV
Sbjct: 181 GNGGVLSDEELKRKFDEFIKRMKEEIVLDDATRTLVVV 211
BLAST of CaUC09G177640 vs. TAIR 10
Match:
AT3G13130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). )
HSP 1 Score: 60.1 bits (144), Expect = 1.7e-09
Identity = 57/154 (37.01%), Postives = 85/154 (55.19%), Query Frame = 0
Query: 1 MFLLCNALLVFLANYSGLFKSLSSSPKNFDPNFRLFDFGLDF------LHQKPPLIHSET 60
MFLLCN L+V +A SGL S K + + FD+G DF L + H
Sbjct: 50 MFLLCNGLVVVVAKCSGLVASSKPIEKIWSNTDKTFDYG-DFESYTTILELEYKSDHGIG 109
Query: 61 AEEKKDDPQENRANLQEEEEKEDEDEDEDEEMLVERFFGGETGELEEMIEEEEEGNCGVM 120
E + + + +E +++E+ED+D+ L + E G I EEEEGN GVM
Sbjct: 110 TESFLAEEVTVEEDTKHQETEDNEEEDDDDNTLADNDGEEECGLRGGSINEEEEGNVGVM 169
Query: 121 --SDEELNRKFDEFIKRMKEEIILDDAPRTLVVV 147
++EE+N+KFDEFI++MKEE+ + +A R L++V
Sbjct: 170 TSTEEEMNKKFDEFIRKMKEELRI-EAKRHLILV 201
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038896510.1 | 5.7e-55 | 84.25 | uncharacterized protein LOC120084761 [Benincasa hispida] | [more] |
TYK07937.1 | 5.9e-44 | 72.26 | uncharacterized protein E5676_scaffold265G00530 [Cucumis melo var. makuwa] | [more] |
XP_008462992.1 | 1.7e-43 | 70.44 | PREDICTED: uncharacterized protein LOC103501239 [Cucumis melo] | [more] |
KGN44005.1 | 6.1e-41 | 71.24 | hypothetical protein Csa_018201 [Cucumis sativus] | [more] |
XP_011659727.1 | 6.1e-41 | 71.24 | uncharacterized protein LOC105436244 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3C7J6 | 2.9e-44 | 72.26 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3CI71 | 8.4e-44 | 70.44 | uncharacterized protein LOC103501239 OS=Cucumis melo OX=3656 GN=LOC103501239 PE=... | [more] |
A0A0A0K300 | 3.0e-41 | 71.24 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G098730 PE=4 SV=1 | [more] |
A0A6J1F6C4 | 8.7e-33 | 62.42 | uncharacterized protein LOC111442742 OS=Cucurbita moschata OX=3662 GN=LOC1114427... | [more] |
A0A6J1IEZ8 | 2.5e-32 | 63.29 | uncharacterized protein LOC111475827 OS=Cucurbita maxima OX=3661 GN=LOC111475827... | [more] |
Match Name | E-value | Identity | Description | |
AT3G13130.1 | 1.7e-09 | 37.01 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |