CaUC09G175760 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC09G175760
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionEmsy N Terminus/ plant Tudor-like domains-containing protein isoform 1
LocationCiama_Chr09: 35073929 .. 35076627 (+)
RNA-Seq ExpressionCaUC09G175760
SyntenyCaUC09G175760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGCCATTACATCAGGGTCATCAGGGTTGTCTTCAAGCGCCACCTACACCGGCCGTAGCAATCCTGCCATAATACGCCCCAGAACGCGCGGCAGCCGCGGGAGGATGAGGCAGATCAGGTACCGGAGTCGCAACAGGTGGCTGTGCTGCGCAGACTACCCTTACTAATCTGAACATAAACAAAAATTTAAATAAATAAATAAATAAAAATAAAGGGAGACGGAGGAAAAATTTTGTGCACTTAAATGTACAATGTATTATATTATAACTGTATATGTAACATACATTTACTCAAATAGATGGTTATACCATTCAAAACTTTTAATATAACAGTATCGAACATATATTGTTTGATCAAATTTTTTTCATCAGTTATACCACACTATATAAATCACAAATGAATTCAATGTTCAACCTAAAACATATATACAAGCGTATATATATGTATCTCACAGTATAAAATAAACAAATATATATCATAGTGTATATATATATATATATATATATATATAAAATAAACAAATATATATCACAAAATATATATGTACATTTATTCATCTCCTCTTCTCTGTTAAGCACTTGCCATTGTCGCCTATCCCCACCTTCTTTACGAAGCCTTAAATCTACCATTGTGCCTTCCACCTTAACCACAAACCCCTATGCTATGTATGGGGGAGATACACGAAACCTAGGTATTTTTTCTAATTTTTGTATTTTATAAAAATCATGCGACCTTAATGGTAAATAAACACTAACATTAATGAAAATTTTGTAGTCTATTCGGCTATTTCTAAAATAAATTGAAGGTAGACAATAATGTAATATAGACCTATAATCAAGGATATCTATGTAATATAGAACTATAATAAATTGTATGGTTTTAATACTTTTTTTGGAAAAAATATTAAAACCATACAATTTTTTAAAATATCCACAACTTTCCATCTTCTTCAATTTCTCTCTCAAAACCCTATCTTAGATCTTTATGTGTTTCCATATGCTGTCGTCTCAGATCTGGACCGTTGCTCAAGTCTTCGACATGCAGATCATGTCATTGTGCATTTTTGTCAACCTTTCTCTCATGCATCTGATTGCCGCGCAGCCTGTAGTTGCTGCCATGCACCGCTATTCATAATCATTTGCAAGTCATCGCCTCAAAACCGTTCAATCGCGTCGCTCAGCCAACCGTCAGTCGCATGCCCCTTTCTATCAAGCACCGGCACCGTGAACTGCCGTGTCTCATATATACTGTAATATATATTTTTTTTATCATATAAACTATAATATATATTCGAGTATTAAGATGGTTTGAGATTTAGGCTTTAGGTTTTAAGGTAAATACCCTGTCATATGATCCTATTTGGTGGTTTTATGGTATATATCTTGTCATATATATGTTTTATGTTAGAGTCCATCTTTGATTTATAGACGGTGGCATATACTATGAATTTGTAGAAAATTGAGTTCATTTGGGATTTATATATACTATGGTAAATATTTCTGTTTATATCTGACTAATTTGAATTAATAATATATACTATGATATAAATAGAATTTATGATATATACTGTGATTCAAATGGTACAACCATCCATTTGAGTACATTTATATTTCATATATTGGTTAGAATATTTGCAAACATATAATATAATGTTGGTATATATTTAAAAATAACCTTGATCTAGTATATTTCAATATTGGTTAGAACAATGCAAACATATAATACAATCTTCTATGGAATACTTAAAAATATCAATGAATCTACCAGTATCGCCTTCATATGTTAAATGAAAAATAAAATTATATTAAATGCATTTTTCTCTTTCCCATTAAAAATAGAAATAAATTTTAACATAATTAATAGTATATAATAAATACATTTTATCTCTCCAACATTAAACATATTTCATAAATATAACAAAATATATAATAAATTAGTTTTCTCTCTCCAACTACCCACTATCTAGGATATTTTTGTCTGAAAATGAAAGTTAAATTCTTTATATAAAAATATCCAAATATTTAAACATTTATAAAAATAAGTTTTAAAAAACGATTGAATCTAATAATCCCGGGGGGAAAACTTTCTTTTAATTAACATTTTCATAATACATAATCTATTTTTTTTAAAAAAAATCATGTACACCATTGAGGTAAGAGGCCAACTTCAATAATTGAAAATATATATATATATATATATATATATATATATATATATATATATTATATTTATAATTAAGAAAGAGAAAATACAAACTTTGGTAATATGACATAATCACATCACAAACCCATCATTAAAAAACAGACCCAAAAGAAAATAAAAGATTTGAATCCAAATGTAATTAAAGAGCAATTGAAATTCCTCTTCAATTACAAAACCACATCGTTCTCCATTCCATTTATTAAACATAGAGAGAGAAATGAAGAAGAAGGGTTTAAGGTTGAGTTGCAAAGGTTGGAGTGGATTTGCCATTTTTCTTCTGATTCTGATTCAGATCTTCACAATCAGCTCTTCATTCTGTTTCGGCGACGAAGAGATGGAAAGAAAAAGCTTAGAAAGAAGAAGAATGGTTGATTCCATGGCGGACTCTGTTTCTGGAAATGGAAGATCCGCCATTGAAGAGCCCAAGAAAGCTGTGGAACAGAGCTTCAGAAAGGCGCCGCCCACCGGAGCAAATCCCATTCAGAATAAGTAG

mRNA sequence

ATGGTCGCCATTACATCAGGGTCATCAGGGTTGTCTTCAAGCGCCACCTACACCGGCCGTAGCAATCCTGCCATAATACGCCCCAGAACGCGCGGCAGCCGCGGGAGGATGAGGCAGATCAGGTACCGGAGTCGCAACAGGTATCTGGACCGTTGCTCAAGTCTTCGACATGCAGATCATGTCATTGTGCATTTTTGTCAACCTTTCTCTCATGCATCTGATTGCCGCGCAGCCTGTAGTTGCTGCCATGCACCGCTATTCATAATCATTTGCAAGTCATCGCCTCAAAACCGTTCAATCGCGTCGCTCAGCCAACCGTCAGTCGCATGCCCCTTTCTATCAAGCACCGGCACCGTGAACTGCCGTGTCTCATATATACTGTTGAGTTGCAAAGGTTGGAGTGGATTTGCCATTTTTCTTCTGATTCTGATTCAGATCTTCACAATCAGCTCTTCATTCTGTTTCGGCGACGAAGAGATGGAAAGAAAAAGCTTAGAAAGAAGAAGAATGGTTGATTCCATGGCGGACTCTGTTTCTGGAAATGGAAGATCCGCCATTGAAGAGCCCAAGAAAGCTGTGGAACAGAGCTTCAGAAAGGCGCCGCCCACCGGAGCAAATCCCATTCAGAATAAGTAG

Coding sequence (CDS)

ATGGTCGCCATTACATCAGGGTCATCAGGGTTGTCTTCAAGCGCCACCTACACCGGCCGTAGCAATCCTGCCATAATACGCCCCAGAACGCGCGGCAGCCGCGGGAGGATGAGGCAGATCAGGTACCGGAGTCGCAACAGGTATCTGGACCGTTGCTCAAGTCTTCGACATGCAGATCATGTCATTGTGCATTTTTGTCAACCTTTCTCTCATGCATCTGATTGCCGCGCAGCCTGTAGTTGCTGCCATGCACCGCTATTCATAATCATTTGCAAGTCATCGCCTCAAAACCGTTCAATCGCGTCGCTCAGCCAACCGTCAGTCGCATGCCCCTTTCTATCAAGCACCGGCACCGTGAACTGCCGTGTCTCATATATACTGTTGAGTTGCAAAGGTTGGAGTGGATTTGCCATTTTTCTTCTGATTCTGATTCAGATCTTCACAATCAGCTCTTCATTCTGTTTCGGCGACGAAGAGATGGAAAGAAAAAGCTTAGAAAGAAGAAGAATGGTTGATTCCATGGCGGACTCTGTTTCTGGAAATGGAAGATCCGCCATTGAAGAGCCCAAGAAAGCTGTGGAACAGAGCTTCAGAAAGGCGCCGCCCACCGGAGCAAATCCCATTCAGAATAAGTAG

Protein sequence

MVAITSGSSGLSSSATYTGRSNPAIIRPRTRGSRGRMRQIRYRSRNRYLDRCSSLRHADHVIVHFCQPFSHASDCRAACSCCHAPLFIIICKSSPQNRSIASLSQPSVACPFLSSTGTVNCRVSYILLSCKGWSGFAIFLLILIQIFTISSSFCFGDEEMERKSLERRRMVDSMADSVSGNGRSAIEEPKKAVEQSFRKAPPTGANPIQNK
Homology
[Close]
BLAST of CaUC09G175760 vs. NCBI nr
Match: ONH95523.1 (hypothetical protein PRUPE_7G075600 [Prunus persica] >CAB4286843.1 unnamed protein product [Prunus armeniaca] >CAB4317213.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 58.5 bits (140), Expect = 7.8e-05
Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 0 

Query: 137 AIFLLILIQIFTISSSFCFGDE-----EMERKSLERRRM---VDSMADSVSGNGRSAIEE 196
           ++F LILI+I  + SSFC   E       ER+SL RR +   V S++ S       A++E
Sbjct: 5   SLFALILIEIL-LCSSFCLCHEVKIFQGRERRSLSRRLLSIPVVSVSPSRLSTSSGAMKE 64

Query: 197 PKKAVEQSFRKAPPTGANPIQNK 212
           PKKAVE S R+ PP+G+NPIQNK
Sbjct: 65  PKKAVESSMRRKPPSGSNPIQNK 86

[Close]
BLAST of CaUC09G175760 vs. NCBI nr
Match: KAB2608119.1 (hypothetical protein D8674_011287 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-04
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 0 

Query: 137 AIFLLILIQIFTISSSFCFGDE-----EMERKSLERRRMVDSMADSVSGNGRSAIEEPKK 196
           ++F LILI+I  +  SFC   E       ERK+L R+ ++  MA S+SG+ R A++EPKK
Sbjct: 6   SLFALILIEIL-LCCSFCLCREVQIFPRRERKTLSRKLLLIPMA-SLSGSSR-AMKEPKK 65

Query: 197 AVEQSFRKAPPTGANPIQNK 212
           AVE S R+ PP+ +NPIQN+
Sbjct: 66  AVESSMRRKPPSTSNPIQNR 82

[Close]
BLAST of CaUC09G175760 vs. NCBI nr
Match: TXG57946.1 (hypothetical protein EZV62_015775 [Acer yangbiense])

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-04
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 0 

Query: 129 SCKGWSGFAIFLLILIQIFTISSSFCFGDE----EMER-KSLERRRMVDSMADSVSGNGR 188
           +CK  SG  +  LI+I I  +SSS C   E    + ER + +  R+M+ SMA   +G  +
Sbjct: 9   NCKNVSG--LIWLIVIHILIMSSSLCMSKEISSVKRERNQQVVSRKMLLSMASISAGLNK 68

Query: 189 ---SAIEEPKKAVEQSFRKAPPTGANPIQNK 212
              +  +EPKKAVE S RKAPP+ ANPIQNK
Sbjct: 69  LKAAIFKEPKKAVEPSLRKAPPSLANPIQNK 97

[Close]
BLAST of CaUC09G175760 vs. ExPASy TrEMBL
Match: M5W792 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G075600 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.8e-05
Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 0 

Query: 137 AIFLLILIQIFTISSSFCFGDE-----EMERKSLERRRM---VDSMADSVSGNGRSAIEE 196
           ++F LILI+I  + SSFC   E       ER+SL RR +   V S++ S       A++E
Sbjct: 5   SLFALILIEIL-LCSSFCLCHEVKIFQGRERRSLSRRLLSIPVVSVSPSRLSTSSGAMKE 64

Query: 197 PKKAVEQSFRKAPPTGANPIQNK 212
           PKKAVE S R+ PP+G+NPIQNK
Sbjct: 65  PKKAVESSMRRKPPSGSNPIQNK 86

[Close]
BLAST of CaUC09G175760 vs. ExPASy TrEMBL
Match: A0A6J5VFA8 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS44578 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.8e-05
Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 0 

Query: 137 AIFLLILIQIFTISSSFCFGDE-----EMERKSLERRRM---VDSMADSVSGNGRSAIEE 196
           ++F LILI+I  + SSFC   E       ER+SL RR +   V S++ S       A++E
Sbjct: 5   SLFALILIEIL-LCSSFCLCHEVKIFQGRERRSLSRRLLSIPVVSVSPSRLSTSSGAMKE 64

Query: 197 PKKAVEQSFRKAPPTGANPIQNK 212
           PKKAVE S R+ PP+G+NPIQNK
Sbjct: 65  PKKAVESSMRRKPPSGSNPIQNK 86

[Close]
BLAST of CaUC09G175760 vs. ExPASy TrEMBL
Match: A0A5N5FYA0 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_011287 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-04
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 0 

Query: 137 AIFLLILIQIFTISSSFCFGDE-----EMERKSLERRRMVDSMADSVSGNGRSAIEEPKK 196
           ++F LILI+I  +  SFC   E       ERK+L R+ ++  MA S+SG+ R A++EPKK
Sbjct: 6   SLFALILIEIL-LCCSFCLCREVQIFPRRERKTLSRKLLLIPMA-SLSGSSR-AMKEPKK 65

Query: 197 AVEQSFRKAPPTGANPIQNK 212
           AVE S R+ PP+ +NPIQN+
Sbjct: 66  AVESSMRRKPPSTSNPIQNR 82

[Close]
BLAST of CaUC09G175760 vs. ExPASy TrEMBL
Match: A0A5C7HNR9 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015775 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-04
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 0 

Query: 129 SCKGWSGFAIFLLILIQIFTISSSFCFGDE----EMER-KSLERRRMVDSMADSVSGNGR 188
           +CK  SG  +  LI+I I  +SSS C   E    + ER + +  R+M+ SMA   +G  +
Sbjct: 9   NCKNVSG--LIWLIVIHILIMSSSLCMSKEISSVKRERNQQVVSRKMLLSMASISAGLNK 68

Query: 189 ---SAIEEPKKAVEQSFRKAPPTGANPIQNK 212
              +  +EPKKAVE S RKAPP+ ANPIQNK
Sbjct: 69  LKAAIFKEPKKAVEPSLRKAPPSLANPIQNK 97

[Close]
BLAST of CaUC09G175760 vs. ExPASy TrEMBL
Match: A0A6A2YML8 (Emsy N Terminus/ plant Tudor-like domains-containing protein isoform 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111377pilonHSYRG00015 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.5e-04
Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 0 

Query: 141 LILIQIFTISSSFCFGD-----EEMERKSLERRRMVDSMADSVSGNGRSAIEEPKKAVEQ 200
           LIL+ I    SS C GD      E +R ++ R+ +  S+A   +GNG +A++EPKKAV  
Sbjct: 11  LILLHILISCSSSCLGDVVVSSGETDRIAISRKVLSSSVASFSAGNG-AAVKEPKKAVLP 70

Query: 201 SFRKAPPTGANPIQN 211
           S RKAPP+  NP QN
Sbjct: 71  SLRKAPPSVPNPTQN 84

The following BLAST results are available for this feature:
BLAST of CaUC09G175760 vs. NCBI nr
Match NameE-valueIdentityDescription
ONH95523.17.8e-0546.99hypothetical protein PRUPE_7G075600 [Prunus persica] >CAB4286843.1 unnamed prote... [more]
KAB2608119.12.3e-0447.50hypothetical protein D8674_011287 [Pyrus ussuriensis x Pyrus communis][more]
TXG57946.13.0e-0445.05hypothetical protein EZV62_015775 [Acer yangbiense][more]
BLAST of CaUC09G175760 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC09G175760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
M5W7923.8e-0546.99Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G075600 PE=4 SV=1[more]
A0A6J5VFA83.8e-0546.99Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS44578 PE=4 S... [more]
A0A5N5FYA01.1e-0447.50Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
A0A5C7HNR91.4e-0445.05Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015775 PE=4 SV=1[more]
A0A6A2YML85.5e-0445.33Emsy N Terminus/ plant Tudor-like domains-containing protein isoform 1 OS=Hibisc... [more]
BLAST of CaUC09G175760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC09G175760.1CaUC09G175760.1mRNA