CaUC09G175460 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGATAACAACCTCCACAGGGTTCATTCAGCATCGTTGAATCCATTCCGCCGGGGTCTCTGATTTCCCGGTCGCCGGAGTTTCTGTTTCCGATCAACCGTTTGTATTCTCTCTATTTCTCTTTAATCTTTCATTTCTTCTCCGATTTTCTCTGATGCCAGGTTTTTTTTGGGGTTTTCTTATCAGAGGTTTTCGAGACTGACGAAGAGCTGGGTAATAACAGAGCTGGTGGTGTGATGGGGTTTTGTATTTCTCCATTGGGAACACCGGCTAGGTTACTTTGGAGCACCAGTTTCTTCCGCCACAAGCTCATGATTTTCTAATTTTCAGCCTTATTGCTGAAAATACCAAAGCCCATCTAATTCGTTTCTCGTTTTAATAAAGATCTCCCTCGATTTCGTGTCGCTGTGGCCAATCAGCCGCCGCCGTAAATCGCCGGTGATCCCTTGCTCACGATTCCTGTTTCAGATTAAAGAGAATAATTAATGATGTCGGACGGTTTGATCTTTAACCGATCTCCAGGTCACGCCAACATGTTGTTTTTCGGAAGTGGTGATTCCATTCTTCGAGGTAATTTTGATGAATTTTGCATTTGAGGGGTCTTTAACTAGGATTATATCGATCGTTATACTGTATTTCTGCTAATGTTAGGACCAAGTTTCACGATGGGGATGGAGGAAACTTCAAAGAGGCGACCCTTTTTCAGCTCTCCGGATGACCTGTTTGACGATGACTACTACGATGATCAGCCACCTGAGAAGAAGCGCCGGCTAACTCAAGAGCAGGTAATTAAGTTATCCTATTATGATAAGGTATTTGTTTCTGGTTTACTTGGTGGGTGGGGATGGAACTGTCGAATCTGAACCCTGAAATGGATGCATTTTACTTGTAGCATATTCCTTATATTCATTCTATGTTGTTGCTTTAATGTGATTACCTTTGAATCAATGCTGGTCTCCCTGCTTATGATATCTGTTGTGAAAAAGAAAGAATAGCATAATTCTCAGATTCTGAAAGATAAATACTAAAGGAAAATTCCCATGGAGGAATGGTTTACATGGCTAATATAGGTTCTGTTTAGAATGACTTTTTAAGTGTAAAACAATTTCAAATAAACCCATGATTGGGTACAATACATCAAGTTCATCTTGAGATTATAGTTTGTTTCTGTTTTGTTTTTCATTTATTTTATTGTAGTTATTTTTCATCTTCCAGTGTTCTCATTTCTTACTAATAAGTGAGGTTCACCATCTTAGATGTTACTGCAAAAAGAGGAAAAGAGAGAAAAAAATGATGTGACAGTCTATGCTGCTGAATGACTTTTATTCATGGCCAATGATTAGGTGCATCTGCTGGAGATTAGCTTTGAGTCAGAAAACAAACTGGAGCCAGAGCGCAAGACTGAGCTAGCAAAGAAGCTGGGTCTGCAGCCAAGGCAAGTGGCTGTGTGGTTTCAAAACCGCCGAGCTAGATGGAAGACAAAGCAGCTTGAAAGGGACTATGATCTTCTCAAATCTTCATATGATTCCTTTCGTTCAAGCTACGACTTTATTGCTAAGGAGAATGAAAGGCTCAAAGCCGAGGTATCTATCTATGCCCACTGAAAGCTATATAGCTTGACGCTTCAACAATTTGGTTTTACAGTGGAGATTCTCCCTTTTGCTCAAAATCTATTATTAATTGTCCATTAACCTTTGATATGCTATGCTAAGTCGTATAGATACTGAAAGCTCAACATTTTCTGATATTTCCTTGCTTGGCTGTCTTTGATGTGACATATCTTCTGAACATAAATTCAAGTAGAATTTTTTGTAAACCTTTAGGATGGTGGTCGGTGGACCGTTTATCTTAGTTCCTTAAGATGACTTGGGTAATTTCTAGTTAATCTTACAAGTTTCATCATCATATTTAGTCTAATGATGTCTTGTAAACTCGTGGTCCTACAATCAAATTGGACTTTTTGGGCTCATCAAGTTAGTCTGGCATAGGTTCTGAACCCAAATTTGTAGGGTCAAGAGAAGATATGGGTTACTTTCCAAGATATGACGGGAATCTTAGGAAGAGGAATGGTGAAATTAGTTAAAAGAGAGACTTGGTATTGTTACTGATTCAGAGTCTCTTATGCATTCTCAATTACTGAACTCAGGTAGCTTCTTTAACTGAGAAACTTCAAGCTAAAGAAGTGGTTGAATCATCGTTTCAAGCTAAGAATCCCGAGCCATTTCTGGAGGATCAACTCCTTGTTCCTGTTGTGCAACATGGCATTAAGATTGAAGACCACCATAGTTGCAGGAGCAACGGAAGTGCTGTGCTGGACGAGGACGGTCCTCAACTCTTAGACAGTGGGGATTCGTACCTCTTGAGCAATGACTATGATGGTTGTGTTTTGCCAGTTTTTGGAGTGAACTCGGAGGAGGAAGATGGGAGTGACGACGGTCAGGGTTACTTCTCGGATGTTTATACAACAGCCGATCAGCAGACTCACGAGGGAGAGCCTTTGACCTGGTGGGACTGGACATCGTAAATGCGTGTTCGAATCATCTCAATATTTAGTAGGGTGGAACTATAATATAAAGTTTACTGTATGATACAGATGAATAAATGTAGTGTGAACATTACTTAGTTTGGAATGAATGTATGTGTATGGATAAAACTTAGATCTTGTACTGTGTTTTACATGATTTGTCTTGAAAAGTTTTGGGCACCTTTAGGACTGGCAAACTTACGAGAACCATCCTAATTTTGAAAATAAGGTTTGGGTCTTTCTTTGTCTTCTAAAAATAATTATGTACATTCTTTCCCATAATATCTTTTTTCATAA CTGATAACAACCTCCACAGGGTTCATTCAGCATCGTTGAATCCATTCCGCCGGGGTCTCTGATTTCCCGGTCGCCGGAGTTTCTGTTTCCGATCAACCAGGTTTTCGAGACTGACGAAGAGCTGGGTAATAACAGAGCTGGTGGTGTGATGGGGTTTTGTATTTCTCCATTGGGAACACCGGCTAGGTTACTTTGGAGCACCAGTTTCTTCCGCCACAAGCTCATGATTTTCTAATTTTCAGCCTTATTGCTGAAAATACCAAAGCCCATCTAATTCGTTTCTCGTTTTAATAAAGATCTCCCTCGATTTCGTGTCGCTGTGGCCAATCAGCCGCCGCCGTAAATCGCCGGTGATCCCTTGCTCACGATTCCTGTTTCAGATTAAAGAGAATAATTAATGATGTCGGACGGTTTGATCTTTAACCGATCTCCAGGTCACGCCAACATGTTGTTTTTCGGAAGTGGTGATTCCATTCTTCGAGGACCAAGTTTCACGATGGGGATGGAGGAAACTTCAAAGAGGCGACCCTTTTTCAGCTCTCCGGATGACCTGTTTGACGATGACTACTACGATGATCAGCCACCTGAGAAGAAGCGCCGGCTAACTCAAGAGCAGGTGCATCTGCTGGAGATTAGCTTTGAGTCAGAAAACAAACTGGAGCCAGAGCGCAAGACTGAGCTAGCAAAGAAGCTGGGTCTGCAGCCAAGGCAAGTGGCTGTGTGGTTTCAAAACCGCCGAGCTAGATGGAAGACAAAGCAGCTTGAAAGGGACTATGATCTTCTCAAATCTTCATATGATTCCTTTCGTTCAAGCTACGACTTTATTGCTAAGGAGAATGAAAGGCTCAAAGCCGAGGGTCAAGAGAAGATATGGGTTACTTTCCAAGATATGACGGGAATCTTAGGAAGAGGAATGGTAGCTTCTTTAACTGAGAAACTTCAAGCTAAAGAAGTGGTTGAATCATCGTTTCAAGCTAAGAATCCCGAGCCATTTCTGGAGGATCAACTCCTTGTTCCTGTTGTGCAACATGGCATTAAGATTGAAGACCACCATAGTTGCAGGAGCAACGGAAGTGCTGTGCTGGACGAGGACGGTCCTCAACTCTTAGACAGTGGGGATTCGTACCTCTTGAGCAATGACTATGATGGTTGTGTTTTGCCAGTTTTTGGAGTGAACTCGGAGGAGGAAGATGGGAGTGACGACGGTCAGGGTTACTTCTCGGATGTTTATACAACAGCCGATCAGCAGACTCACGAGGGAGAGCCTTTGACCTGGTGGGACTGGACATCGTAAATGCGTGTTCGAATCATCTCAATATTTAGTAGGGTGGAACTATAATATAAAGTTTACTGTATGATACAGATGAATAAATGTAGTGTGAACATTACTTAGTTTGGAATGAATGTATGTGTATGGATAAAACTTAGATCTTGTACTGTGTTTTACATGATTTGTCTTGAAAAGTTTTGGGCACCTTTAGGACTGGCAAACTTACGAGAACCATCCTAATTTTGAAAATAAGGTTTGGGTCTTTCTTTGTCTTCTAAAAATAATTATGTACATTCTTTCCCATAATATCTTTTTTCATAA ATGATGTCGGACGGTTTGATCTTTAACCGATCTCCAGGTCACGCCAACATGTTGTTTTTCGGAAGTGGTGATTCCATTCTTCGAGGACCAAGTTTCACGATGGGGATGGAGGAAACTTCAAAGAGGCGACCCTTTTTCAGCTCTCCGGATGACCTGTTTGACGATGACTACTACGATGATCAGCCACCTGAGAAGAAGCGCCGGCTAACTCAAGAGCAGGTGCATCTGCTGGAGATTAGCTTTGAGTCAGAAAACAAACTGGAGCCAGAGCGCAAGACTGAGCTAGCAAAGAAGCTGGGTCTGCAGCCAAGGCAAGTGGCTGTGTGGTTTCAAAACCGCCGAGCTAGATGGAAGACAAAGCAGCTTGAAAGGGACTATGATCTTCTCAAATCTTCATATGATTCCTTTCGTTCAAGCTACGACTTTATTGCTAAGGAGAATGAAAGGCTCAAAGCCGAGGGTCAAGAGAAGATATGGGTTACTTTCCAAGATATGACGGGAATCTTAGGAAGAGGAATGGTAGCTTCTTTAACTGAGAAACTTCAAGCTAAAGAAGTGGTTGAATCATCGTTTCAAGCTAAGAATCCCGAGCCATTTCTGGAGGATCAACTCCTTGTTCCTGTTGTGCAACATGGCATTAAGATTGAAGACCACCATAGTTGCAGGAGCAACGGAAGTGCTGTGCTGGACGAGGACGGTCCTCAACTCTTAGACAGTGGGGATTCGTACCTCTTGAGCAATGACTATGATGGTTGTGTTTTGCCAGTTTTTGGAGTGAACTCGGAGGAGGAAGATGGGAGTGACGACGGTCAGGGTTACTTCTCGGATGTTTATACAACAGCCGATCAGCAGACTCACGAGGGAGAGCCTTTGACCTGGTGGGACTGGACATCGTAA MMSDGLIFNRSPGHANMLFFGSGDSILRGPSFTMGMEETSKRRPFFSSPDDLFDDDYYDDQPPEKKRRLTQEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSFRSSYDFIAKENERLKAEGQEKIWVTFQDMTGILGRGMVASLTEKLQAKEVVESSFQAKNPEPFLEDQLLVPVVQHGIKIEDHHSCRSNGSAVLDEDGPQLLDSGDSYLLSNDYDGCVLPVFGVNSEEEDGSDDGQGYFSDVYTTADQQTHEGEPLTWWDWTS Homology
BLAST of CaUC09G175460 vs. NCBI nr
Match: XP_038890996.1 (homeobox-leucine zipper protein HAT5-like [Benincasa hispida] >XP_038890997.1 homeobox-leucine zipper protein HAT5-like [Benincasa hispida] >XP_038890998.1 homeobox-leucine zipper protein HAT5-like [Benincasa hispida]) HSP 1 Score: 535.8 bits (1379), Expect = 2.4e-148 Identity = 271/298 (90.94%), Postives = 273/298 (91.61%), Query Frame = 0
BLAST of CaUC09G175460 vs. NCBI nr
Match: XP_008458752.1 (PREDICTED: homeobox-leucine zipper protein HAT5-like [Cucumis melo] >KAA0037506.1 homeobox-leucine zipper protein HAT5-like [Cucumis melo var. makuwa] >TYK01981.1 homeobox-leucine zipper protein HAT5-like [Cucumis melo var. makuwa]) HSP 1 Score: 526.2 bits (1354), Expect = 1.9e-145 Identity = 266/298 (89.26%), Postives = 268/298 (89.93%), Query Frame = 0
BLAST of CaUC09G175460 vs. NCBI nr
Match: XP_004142356.2 (homeobox-leucine zipper protein HAT5 [Cucumis sativus] >KAE8648892.1 hypothetical protein Csa_008041 [Cucumis sativus]) HSP 1 Score: 520.4 bits (1339), Expect = 1.0e-143 Identity = 264/298 (88.59%), Postives = 266/298 (89.26%), Query Frame = 0
BLAST of CaUC09G175460 vs. NCBI nr
Match: KAG6602444.1 (Homeobox-leucine zipper protein HAT5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033127.1 Homeobox-leucine zipper protein HAT5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 506.1 bits (1302), Expect = 2.0e-139 Identity = 254/298 (85.23%), Postives = 265/298 (88.93%), Query Frame = 0
BLAST of CaUC09G175460 vs. NCBI nr
Match: XP_022959838.1 (homeobox-leucine zipper protein HAT5-like [Cucurbita moschata]) HSP 1 Score: 505.0 bits (1299), Expect = 4.5e-139 Identity = 253/297 (85.19%), Postives = 264/297 (88.89%), Query Frame = 0
BLAST of CaUC09G175460 vs. ExPASy Swiss-Prot
Match: Q02283 (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=1 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 9.2e-71 Identity = 160/301 (53.16%), Postives = 195/301 (64.78%), Query Frame = 0
BLAST of CaUC09G175460 vs. ExPASy Swiss-Prot
Match: Q6YWR4 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX16 PE=2 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 8.7e-53 Identity = 142/362 (39.23%), Postives = 191/362 (52.76%), Query Frame = 0
BLAST of CaUC09G175460 vs. ExPASy Swiss-Prot
Match: A2X980 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=HOX16 PE=2 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.5e-52 Identity = 142/364 (39.01%), Postives = 191/364 (52.47%), Query Frame = 0
BLAST of CaUC09G175460 vs. ExPASy Swiss-Prot
Match: Q9XH36 (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica OX=39946 GN=HOX5 PE=1 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.4e-42 Identity = 98/205 (47.80%), Postives = 128/205 (62.44%), Query Frame = 0
BLAST of CaUC09G175460 vs. ExPASy Swiss-Prot
Match: Q6ZA74 (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX5 PE=1 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.4e-42 Identity = 98/205 (47.80%), Postives = 128/205 (62.44%), Query Frame = 0
BLAST of CaUC09G175460 vs. ExPASy TrEMBL
Match: A0A5A7T5T2 (Homeobox-leucine zipper protein HAT5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00880 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 9.1e-146 Identity = 266/298 (89.26%), Postives = 268/298 (89.93%), Query Frame = 0
BLAST of CaUC09G175460 vs. ExPASy TrEMBL
Match: A0A1S3C9T9 (homeobox-leucine zipper protein HAT5-like OS=Cucumis melo OX=3656 GN=LOC103498065 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 9.1e-146 Identity = 266/298 (89.26%), Postives = 268/298 (89.93%), Query Frame = 0
BLAST of CaUC09G175460 vs. ExPASy TrEMBL
Match: A0A6J1H729 (homeobox-leucine zipper protein HAT5-like OS=Cucurbita moschata OX=3662 GN=LOC111460778 PE=4 SV=1) HSP 1 Score: 505.0 bits (1299), Expect = 2.2e-139 Identity = 253/297 (85.19%), Postives = 264/297 (88.89%), Query Frame = 0
BLAST of CaUC09G175460 vs. ExPASy TrEMBL
Match: A0A6J1FDM9 (homeobox-leucine zipper protein HAT5-like OS=Cucurbita moschata OX=3662 GN=LOC111444797 PE=4 SV=1) HSP 1 Score: 503.4 bits (1295), Expect = 6.3e-139 Identity = 258/297 (86.87%), Postives = 263/297 (88.55%), Query Frame = 0
BLAST of CaUC09G175460 vs. ExPASy TrEMBL
Match: A0A6J1JZ53 (homeobox-leucine zipper protein HAT5-like OS=Cucurbita maxima OX=3661 GN=LOC111489584 PE=4 SV=1) HSP 1 Score: 500.7 bits (1288), Expect = 4.1e-138 Identity = 255/297 (85.86%), Postives = 263/297 (88.55%), Query Frame = 0
BLAST of CaUC09G175460 vs. TAIR 10
Match: AT3G01470.1 (homeobox 1 ) HSP 1 Score: 268.5 bits (685), Expect = 6.6e-72 Identity = 160/301 (53.16%), Postives = 195/301 (64.78%), Query Frame = 0
BLAST of CaUC09G175460 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 ) HSP 1 Score: 125.9 bits (315), Expect = 5.3e-29 Identity = 71/138 (51.45%), Postives = 93/138 (67.39%), Query Frame = 0
BLAST of CaUC09G175460 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 ) HSP 1 Score: 125.2 bits (313), Expect = 9.0e-29 Identity = 78/197 (39.59%), Postives = 116/197 (58.88%), Query Frame = 0
BLAST of CaUC09G175460 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 ) HSP 1 Score: 125.2 bits (313), Expect = 9.0e-29 Identity = 78/197 (39.59%), Postives = 116/197 (58.88%), Query Frame = 0
BLAST of CaUC09G175460 vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family ) HSP 1 Score: 123.2 bits (308), Expect = 3.4e-28 Identity = 62/102 (60.78%), Postives = 78/102 (76.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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