CaUC09G175370 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC09G175370
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr09: 34684136 .. 34686380 (-)
RNA-Seq ExpressionCaUC09G175370
SyntenyCaUC09G175370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTATGTTTGAAGATTTCAAATTTCCATGAGCTATTTCATCTTGTTCTAAGGCCTTGTGCATGTGTGCTAATGCTTTGGCTATTCTGCCTGCTATCTCCAGCCTGCTCATCCAAGGGAATGATTTCTTGTTCTGGCTTGATCCTGAGATTTCAACAGGACAAAAATTAGTGTTTTTGGGCTTTCTAGCTAATTTTGGACTAAAAGAATAAATCTAATAAATAAGGAAAAACTAAAACTAGATTGAGACCAAGACAAGATCATTATGGGTCAAGGAAGGAAGGGAGTTGACCTCTTGGCCCAACTCTCCTACAACCTCCAAGGCTGAGAAGCCCAATCACCACATAGGGCACGAGTCGGCCTTTGGGTCATCCCACCCCTCGAATGATCATACGAAGCGTGTCCAACACATGCCCCAATCCAATGAAATCATAGATTATCTTATTAGATTATATGTGATAACCGGATTCCAAAAGGGAATAAGAGAAGACTTAGGTCAATCTTCTTTACAAATACATCATTATAGCTCCATATAAGATAGCTTGAATCCTACTTTCAAATTCCTTAGTTTAGACACTCTTTCACTCATCGGAGTGTGTGTGGCAAGCACCTATACTGGTTATGTTCTTCTCCCCGTCAAACAAGTGTACTACTAGTGTCACCTAAAGGCCAGGTACACTTCCCTTATCTAGATTTTGGCATCAACATAATTGATGGATTATGAAACCCAAATGAGATTGATTTAAACAAGAAAAAACAAAGAAACCAGTTAGTTTAAAGTGAACAACGACCATATTTAAAAGTTTTAAATCTTACCATGGAGAAGGCTGAATAAGCTTCCATTAGACTGAAATTCATAGACCAAAAGCTTCTCGTGATCAGAACTATAGAAGGCAAGTGGTGGAAGTACATTAGGATGCTTCACTCTATCAATTGTCCACATTCTTTTCATAAACTCATCTGTTGAAATCCCCCAATCCTTAAACCTCTTTACAGCAAATACCATTCCATAATCAAACATAACCTTGTAAAGACTCCCATGATTCCCTCTTCCAATCAACTCTGCAGGAGCCTTTAGCAAGTCCTCAAACTTCAACCCATTCACCACTGAAGTTGTTGGCACTATCAGTGATGATGACAGCCCTCCACTCTCGGTTGAAAGCATTGAAAACTCTGGCTTGCTAGTTTTGTATTCACTTGACAAAGAAACAGTACTGAACTTATTAATTCCATCATCATCTACTGCTACAACTCTGTTGGTTGAAAGCCTTGAATCCCCTTTGCTTTCCCTTTTCCTCCTTTTACATATCATGAAAATGACTATAACTGTTAAGAAAACACCAAGTATAATGTATCCTGAGTATATCAATATATGGTCTTTATTGTTGTGGTTTGATTCTTCAACTCCTGGTTTGACTTCTTGTAGCTTGATTGAGTGGCATTTTGTTGGTAATGGTTCACCACAAAGCAGAGGATTTCCCATGAAGCTGTTTGAAGCAAAGTAGCTACCGCCGTCGGTCGGAATCGAACCAGAGAAATTGTTGAAGGAAACATTGAAACTCTCAAAATTTGAGAATTCAAACTGGGGTATCTCTCCAGAGAACATGTTGTTCTCAGCAAGGAACATAGTGAGGCCTGAAATCCTTGACAAATCTGGCAAGTTCCCAGATAAGTTGTTGTTTGAAAGTTCAAGTCTTCTAAGGTTCACTAACTTGGATAGAGAACTTGGGAGATTTCCATTGAATTTGTTTCCTCTTATATGAAAGCGAGTTAGTTCCTTACAATTCTCAATGTCATCTGGGATTTCTCCAGAGATGTTGTTGTAATTGATGCTGAGAACATTGAGGGAATCCATTAAAGGCTTTGAATTGCAGAGAAAGCTGGTTTGAAGAGTTCCTGAAAGATTCAACCCATCAAGAAACAGTTTCTTTACAGATTCATTTCTTCCATCACAGACCAAACCAAGCCATCCATCCTTGCAAGGATCAGAAGAAATGTTCCATCCAAGATTATGGTTCTGTAGGCCATTTTGGGAACTGAGTTTTGCAAGAAACTGAATCAGTGAGCTCTTCACAGAATCATCCACAGCATCAGAATTGGGAACGAGGAGTAGAAATGAACAAACAAGGAGCACCCAGAGGGAAATCTGATTCATTTTTTTCAATTTGTTTGGGGAAAATCAACCAGGAGAAGTTAATAGGAGAAGGGTTTCAAAGAAGGGCTAATAAGAAGCAGAGAGGATAA

mRNA sequence

ATGAGAAGGGAGTTGACCTCTTGGCCCAACTCTCCTACAACCTCCAAGGCTGAGAAGCCCAATCACCACATAGGGCACGAGTCGGCCTTTGGGTCATCCCACCCCTCGAATGATCATACGAAGCGTGTCCAACACATGCCCCAATCCAATGAAATCATAGATTATCTTATTAGATTATATGTGATAACCGGATTCCAAAAGGGAATAAGAGAAGACTTAGGAGCCTTTAGCAAGTCCTCAAACTTCAACCCATTCACCACTGAAGTTGTTGGCACTATCAGTGATGATGACAGCCCTCCACTCTCGGTTGAAAGCATTGAAAACTCTGGCTTGCTACTACCGCCGTCGGTCGGAATCGAACCAGAGAAATTGTTGAAGGAAACATTGAAACTCTCAAAATTTGAGAATTCAAACTGGGGTATCTCTCCAGAGAACATGTTGTTCTCAGCAAGGAACATAGTGAGGCCTGAAATCCTTGACAAATCTGGCAAGTTCCCAGATAAGTTGTTGTTTGAAAGTTCAAGTCTTCTAAGAGAAAGCTGGTTTGAAGAGTTCCTGAAAGATTCAACCCATCAAGAAACAGTTTCTTTACAGATTCATTTCTTCCATCACAGACCAAACCAAGCCATCCATCCTTGCAAGGATCAGAAGAAATGTTCCATCCAAGATTATGTGAGCTCTTCACAGAATCATCCACAGCATCAGAATTGGGAACGAGGAGTAGAAATGAACAAACAAGGAGCACCCAGAGGGAAATCTGATTCATTTTTTTCAATTTGTTTGGGGAAAATCAACCAGGAGAAGTTAATAGGAGAAGGGTTTCAAAGAAGGGCTAATAAGAAGCAGAGAGGATAA

Coding sequence (CDS)

ATGAGAAGGGAGTTGACCTCTTGGCCCAACTCTCCTACAACCTCCAAGGCTGAGAAGCCCAATCACCACATAGGGCACGAGTCGGCCTTTGGGTCATCCCACCCCTCGAATGATCATACGAAGCGTGTCCAACACATGCCCCAATCCAATGAAATCATAGATTATCTTATTAGATTATATGTGATAACCGGATTCCAAAAGGGAATAAGAGAAGACTTAGGAGCCTTTAGCAAGTCCTCAAACTTCAACCCATTCACCACTGAAGTTGTTGGCACTATCAGTGATGATGACAGCCCTCCACTCTCGGTTGAAAGCATTGAAAACTCTGGCTTGCTACTACCGCCGTCGGTCGGAATCGAACCAGAGAAATTGTTGAAGGAAACATTGAAACTCTCAAAATTTGAGAATTCAAACTGGGGTATCTCTCCAGAGAACATGTTGTTCTCAGCAAGGAACATAGTGAGGCCTGAAATCCTTGACAAATCTGGCAAGTTCCCAGATAAGTTGTTGTTTGAAAGTTCAAGTCTTCTAAGAGAAAGCTGGTTTGAAGAGTTCCTGAAAGATTCAACCCATCAAGAAACAGTTTCTTTACAGATTCATTTCTTCCATCACAGACCAAACCAAGCCATCCATCCTTGCAAGGATCAGAAGAAATGTTCCATCCAAGATTATGTGAGCTCTTCACAGAATCATCCACAGCATCAGAATTGGGAACGAGGAGTAGAAATGAACAAACAAGGAGCACCCAGAGGGAAATCTGATTCATTTTTTTCAATTTGTTTGGGGAAAATCAACCAGGAGAAGTTAATAGGAGAAGGGTTTCAAAGAAGGGCTAATAAGAAGCAGAGAGGATAA

Protein sequence

MRRELTSWPNSPTTSKAEKPNHHIGHESAFGSSHPSNDHTKRVQHMPQSNEIIDYLIRLYVITGFQKGIREDLGAFSKSSNFNPFTTEVVGTISDDDSPPLSVESIENSGLLLPPSVGIEPEKLLKETLKLSKFENSNWGISPENMLFSARNIVRPEILDKSGKFPDKLLFESSSLLRESWFEEFLKDSTHQETVSLQIHFFHHRPNQAIHPCKDQKKCSIQDYVSSSQNHPQHQNWERGVEMNKQGAPRGKSDSFFSICLGKINQEKLIGEGFQRRANKKQRG
Homology
[Close]
BLAST of CaUC09G175370 vs. NCBI nr
Match: PON34792.1 (hypothetical protein PanWU01x14_341390, partial [Parasponia andersonii])

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-10
Identity = 39/59 (66.10%), Postives = 44/59 (74.58%), Query Frame = 0 

Query: 118 GIEPEKLLKETLKLSKFENSNWGISPENMLFSARNIVRPEILDKSGKFPDKLLFESSSL 177
           GI P +LL ETL   KFE SN GISP + LFSARN VRPEILDKSG  P+ LL E+SS+
Sbjct: 4   GIRPVRLLLETLNSFKFEKSNRGISPPSSLFSARNTVRPEILDKSGNVPNNLLLETSSI 62

[Close]
BLAST of CaUC09G175370 vs. NCBI nr
Match: PON52041.1 (LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_309750, partial [Trema orientale])

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-08
Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 0 

Query: 118 GIEPEKLLKETLKLSKFENSNWGISPENMLFSARNIVRPEILDKSGKFPDKLL 171
           GI P +LL ETL   KFE SN GISP + LFSARN VRPEILDKSG  P+ LL
Sbjct: 4   GIRPVRLLLETLNSFKFEKSNRGISPPSSLFSARNTVRPEILDKSGNVPNNLL 56

[Close]
BLAST of CaUC09G175370 vs. ExPASy TrEMBL
Match: A0A2P5AE34 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_341390 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-10
Identity = 39/59 (66.10%), Postives = 44/59 (74.58%), Query Frame = 0 

Query: 118 GIEPEKLLKETLKLSKFENSNWGISPENMLFSARNIVRPEILDKSGKFPDKLLFESSSL 177
           GI P +LL ETL   KFE SN GISP + LFSARN VRPEILDKSG  P+ LL E+SS+
Sbjct: 4   GIRPVRLLLETLNSFKFEKSNRGISPPSSLFSARNTVRPEILDKSGNVPNNLLLETSSI 62

[Close]
BLAST of CaUC09G175370 vs. ExPASy TrEMBL
Match: A0A2P5BTC1 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_309750 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-08
Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 0 

Query: 118 GIEPEKLLKETLKLSKFENSNWGISPENMLFSARNIVRPEILDKSGKFPDKLL 171
           GI P +LL ETL   KFE SN GISP + LFSARN VRPEILDKSG  P+ LL
Sbjct: 4   GIRPVRLLLETLNSFKFEKSNRGISPPSSLFSARNTVRPEILDKSGNVPNNLL 56

The following BLAST results are available for this feature:
BLAST of CaUC09G175370 vs. NCBI nr
Match NameE-valueIdentityDescription
PON34792.12.9e-1066.10hypothetical protein PanWU01x14_341390, partial [Parasponia andersonii][more]
PON52041.12.1e-0867.92LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_309750, partial [Trema orie... [more]
BLAST of CaUC09G175370 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC09G175370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5AE341.4e-1066.10Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5BTC11.0e-0867.92Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_309... [more]
BLAST of CaUC09G175370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC09G175370.1CaUC09G175370.1mRNA