CaUC09G174670 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC09G174670
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionapidaecins type 14-like isoform X1
LocationCiama_Chr09: 33796943 .. 33797426 (-)
RNA-Seq ExpressionCaUC09G174670
SyntenyCaUC09G174670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAGCCAAGAATTTTATCAATTCTTCTCCTTTCATGCTTTCTTTTTCTCTTTCTCTCTCCTGGTATACTCTTCTCTCTCTTATTCTTTGTAATTCTTTTCTTCATGGATTTTTATTGTATTCATATCCTTATCTCTTCTCTGTTCAAACTTTTTTTTTTTCCAAAGGATTTGGAGTAGAAATGATGGGAACTGTGGAACAACATCCAGCCTCTCTTACTCAAGAAAAGGCAACAATTACAAATACTTTTCTTCTCTGTCTCTCTAATATTGTCTCCAATTTTTTTAAACACAAATGAACCGTACCGGATATAATTAATTTGATGAAGATTATGTTTACGTTTGAGTATTGCAGGAAACGAGTGTAGGAAAATGGAGGAAGATGATGGTTCAATTAGAGGACGACTATCATGATCCAGGACCTAATAACCCAATGGCAATGGTTGCATATGATATGGCTCCTTCTCCTGCAACACCTTGA

mRNA sequence

ATGGATAAGCCAAGAATTTTATCAATTCTTCTCCTTTCATGCTTTCTTTTTCTCTTTCTCTCTCCTGGATTTGGAGTAGAAATGATGGGAACTGTGGAACAACATCCAGCCTCTCTTACTCAAGAAAAGGCAACAATTACAAATACTGAAACGAGTGTAGGAAAATGGAGGAAGATGATGGTTCAATTAGAGGACGACTATCATGATCCAGGACCTAATAACCCAATGGCAATGGTTGCATATGATATGGCTCCTTCTCCTGCAACACCTTGA

Coding sequence (CDS)

ATGGATAAGCCAAGAATTTTATCAATTCTTCTCCTTTCATGCTTTCTTTTTCTCTTTCTCTCTCCTGGATTTGGAGTAGAAATGATGGGAACTGTGGAACAACATCCAGCCTCTCTTACTCAAGAAAAGGCAACAATTACAAATACTGAAACGAGTGTAGGAAAATGGAGGAAGATGATGGTTCAATTAGAGGACGACTATCATGATCCAGGACCTAATAACCCAATGGCAATGGTTGCATATGATATGGCTCCTTCTCCTGCAACACCTTGA

Protein sequence

MDKPRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMMVQLEDDYHDPGPNNPMAMVAYDMAPSPATP
Homology
BLAST of CaUC09G174670 vs. NCBI nr
Match: XP_031741770.1 (probable calcium-binding protein CML47 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 3.3e-13
Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 0

Query: 1  MDKPRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMM 60
          M+  RIL ILL+SCFLFLFLSPGFGVE M T+EQ  ASLT  +      E S GKWR +M
Sbjct: 1  MEDQRILPILLVSCFLFLFLSPGFGVETMRTMEQ-AASLTPHE-----KEMSGGKWRDVM 60

Query: 61 V-QLEDDYHDPGPNNPMAMVAYDMAPSPATP 91
          V QL +DYH PGPN P ++     AP+ ATP
Sbjct: 61 VDQLLEDYHGPGPNKPRSIT----APNSATP 81

BLAST of CaUC09G174670 vs. NCBI nr
Match: KGN52469.1 (hypothetical protein Csa_008670 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 3.3e-13
Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 0

Query: 1  MDKPRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMM 60
          M+  RIL ILL+SCFLFLFLSPGFGVE M T+EQ  ASLT  +      E S GKWR +M
Sbjct: 1  MEDQRILPILLVSCFLFLFLSPGFGVETMRTMEQ-AASLTPHE-----KEMSGGKWRDVM 60

Query: 61 V-QLEDDYHDPGPNNPMAMVAYDMAPSPATP 91
          V QL +DYH PGPN P ++     AP+ ATP
Sbjct: 61 VDQLLEDYHGPGPNKPRSIT----APNSATP 81

BLAST of CaUC09G174670 vs. NCBI nr
Match: KAA0039469.1 (hypothetical protein E6C27_scaffold64G002790 [Cucumis melo var. makuwa] >TYK00659.1 hypothetical protein E5676_scaffold169G002810 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-04
Identity = 34/62 (54.84%), Postives = 40/62 (64.52%), Query Frame = 0

Query: 29 MGTVEQHPASLTQEKATITNTETSVGKWRKMMVQLEDDYHDPGPNNPMAMVAYDMAPSPA 88
          MGT+EQ  ASLT  +      E S GKWR +MVQL +DYH PGPN P A  +Y+MA   A
Sbjct: 1  MGTMEQ-AASLTPHE-----KEISGGKWRDVMVQLREDYHGPGPNKPKA--SYNMAAPSA 54

Query: 89 TP 91
          TP
Sbjct: 61 TP 54

BLAST of CaUC09G174670 vs. NCBI nr
Match: XP_022133549.1 (apidaecins type 14-like isoform X1 [Momordica charantia])

HSP 1 Score: 53.9 bits (128), Expect = 8.2e-04
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0

Query: 1  MDKPRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMM 60
          MD   I S+LL+S  L LF S GFGV++MG+ E HP S+T  K      + S+ K RK  
Sbjct: 1  MDSLTIFSLLLISSLLLLFFSHGFGVDVMGSGE-HPESMTPLK------QESIQKSRK-- 60

Query: 61 VQLEDDYHDPGPNNP 76
          V    +YHDP PN+P
Sbjct: 61 VNEVANYHDPAPNHP 66

BLAST of CaUC09G174670 vs. ExPASy TrEMBL
Match: A0A0A0KU89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636610 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.6e-13
Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 0

Query: 1  MDKPRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMM 60
          M+  RIL ILL+SCFLFLFLSPGFGVE M T+EQ  ASLT  +      E S GKWR +M
Sbjct: 1  MEDQRILPILLVSCFLFLFLSPGFGVETMRTMEQ-AASLTPHE-----KEMSGGKWRDVM 60

Query: 61 V-QLEDDYHDPGPNNPMAMVAYDMAPSPATP 91
          V QL +DYH PGPN P ++     AP+ ATP
Sbjct: 61 VDQLLEDYHGPGPNKPRSIT----APNSATP 81

BLAST of CaUC09G174670 vs. ExPASy TrEMBL
Match: A0A5A7TDZ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002810 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 8.0e-05
Identity = 34/62 (54.84%), Postives = 40/62 (64.52%), Query Frame = 0

Query: 29 MGTVEQHPASLTQEKATITNTETSVGKWRKMMVQLEDDYHDPGPNNPMAMVAYDMAPSPA 88
          MGT+EQ  ASLT  +      E S GKWR +MVQL +DYH PGPN P A  +Y+MA   A
Sbjct: 1  MGTMEQ-AASLTPHE-----KEISGGKWRDVMVQLREDYHGPGPNKPKA--SYNMAAPSA 54

Query: 89 TP 91
          TP
Sbjct: 61 TP 54

BLAST of CaUC09G174670 vs. ExPASy TrEMBL
Match: A0A6J1BWA5 (apidaecins type 14-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006109 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.0e-04
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0

Query: 1  MDKPRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMM 60
          MD   I S+LL+S  L LF S GFGV++MG+ E HP S+T  K      + S+ K RK  
Sbjct: 1  MDSLTIFSLLLISSLLLLFFSHGFGVDVMGSGE-HPESMTPLK------QESIQKSRK-- 60

Query: 61 VQLEDDYHDPGPNNP 76
          V    +YHDP PN+P
Sbjct: 61 VNEVANYHDPAPNHP 66

BLAST of CaUC09G174670 vs. ExPASy TrEMBL
Match: A0A6J1BVK3 (apidaecins type 73-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006109 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.8e-04
Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 0

Query: 1  MDKPRILSILLLSCFLFLFLSPGFGVEMMGTVEQHPASLTQEKATITNTETSVGKWRKMM 60
          MD   I S+LL+S  L LF S GFGV++MG+ E HP S+T  K        S+ K RK  
Sbjct: 1  MDSLTIFSLLLISSLLLLFFSHGFGVDVMGSGE-HPESMTPLK-------ESIQKSRK-- 60

Query: 61 VQLEDDYHDPGPNNP 76
          V    +YHDP PN+P
Sbjct: 61 VNEVANYHDPAPNHP 65

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031741770.13.3e-1358.24probable calcium-binding protein CML47 [Cucumis sativus][more]
KGN52469.13.3e-1358.24hypothetical protein Csa_008670 [Cucumis sativus][more]
KAA0039469.11.7e-0454.84hypothetical protein E6C27_scaffold64G002790 [Cucumis melo var. makuwa] >TYK0065... [more]
XP_022133549.18.2e-0446.67apidaecins type 14-like isoform X1 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KU891.6e-1358.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636610 PE=4 SV=1[more]
A0A5A7TDZ08.0e-0554.84Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1BWA54.0e-0446.67apidaecins type 14-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11100610... [more]
A0A6J1BVK36.8e-0446.67apidaecins type 73-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC11100610... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC09G174670.1CaUC09G174670.1mRNA