
CaUC09G174470 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCACACCCAAAATTCCGCTGTTGATTTGGTTTGTGAAGCTCTGAGAACGTGCCACCCAAATACAAAGAAAACAACCTCCAACTGTCCGTTCCAACGCCTCGCCTCTCTCTTCTCTACGCTCCGCTTTGCAGTTACACCATCTCCGCTTTCCCCACCCATTCAAACTTCAAACTCGCCGGAAAAAACCCACCCACCAATTCGATAGACCCATTCTTCATCCGGACCAAATCTTTTCACTCCCTAATCGAAATGGGTTCTGTTGATTTGGGTTTGTGCGGCCATGGTTGATCATTGCGGCGATTAAGATGAGTGGTTCTAAAGGTAAGAAGAAATGGGGATGTTGCAGAGTTAGGGATTGCTTTCGCCATGGACTCCGTTCCTGGGTCGGTGGGCACCGGTGCCAGTTTCTCTTTAAGATTGGGGCAGACTGTGTTCTCGTCTGCCTCGCTTCTTTTCATGTCATTGGGTGTTGAGTTCTATAGCTACACTGCTTTCTGGTGATTCTCTTTTCTCTGAGATTTTTGGATTAATTTGTTTTGATCTCAACGATTTGTTTGTTTGATTCTGTTTCTCTGGGGTTTTGTTGGATGTTTGTTCTTGGGTTCTCTCTGTTGTTGGGGTTTTGGATGATCCCCGGAAGAAGGGATGATTGGATTTGAAAATCTCTGAAATTAAGTTTTGATGGGATTTGCGTTTGTGTTCTTGAGATGGATGGATTGAGAAGAACTTGATCTTTGTTCCTTTCTGGCCTAATTGATGTTCAAATTGAAGGGTTACTATTCATATGTTTGTTAGGATCTGTGAGTTTAAGAAAATTTTTTAATAACTCGTAGTTGTTGATGATATAATATTAAATTTATCTTTAAATGTAAGCTTAATTTTTTAGGTTAATCTATGATTTAACATTTGCCTACAATATCCTAATAAATTATTGGTTTCTTAAATTTAGTCTTCAACTTTGAGCTGAGTTTATGTAGTTTTTGTTTTTTCTTCCAAAGAAGAAAGTTTCAGTTGCTGTCTGAATTTGATAACATCGTTTTTGATATATATGCCTCATAAGTCTATTTAGCTGTCTATTATTTTATTCTAACTTGACCCAAATTAGTTCAATGGACATATTATGTCAGCTTTGTTTTTGTTAATTGAAATTTTTTAATATTTAGTGACTAAATATACAAACTGTTTAAAGGGTTAGGCTGCGAGTTTATTATTTAAAATTACTTCCTTGTCTTCTTGGATAGAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTGAGTTCAATAATATGTTGGAGTGTAAATTTGAACCTTTGTTTTCTTGGTTGAAGATATTATGTCTTAGCCAGCTGTGCTATGCTTATGCTTAAGTTGGCTTGTTAGAATGTCATTTTGTCTGTGGTGGTCTTCTGTTTGGTGATTCTATTTCATCTGGCATGAGTCTCATACCTCATTCATTCAGTACAATTGAGATTTATCCATTTAACCAAAAACTTTCTTAGGATCTATCTGGAATGTGATTGTTTCAAACATGGGTTATATGCAAAGAACTTCATTCAGAAGATTTACATAACTTGTTATATAGATTTGTGAAAATGTCCTAGGAAAACAAGTGCAGCTTCTATTACTTTACTTGAAAGAAAACCGAATCTCTGCACAAATGTTTCTCTTAGCTTAGCAAGACAAGTCGAGTCCATTACTAAATAGTTTGTGTGATATGTAGGTGATGAGAGTATTCAGTTTAAAGTAATATCATTCATGAGATTAGCCGAACTTGCTCGTCTCTTTGTTTATCACATAGTTTGTTCTGCCGGGTATTCTTGGATTTTTTCTTTTGATGTTCATATTTCCATTGTTGAATTTCATTGCAGCTACCTTGTAACAGTGATGGGTTTGGTCATACCCTGGAGCTTCACTTTAGCATTGGTTGATGGCTACTCTGTTCTCGTAAAATGTCCTCTTCGACAGCCCGGAATACTTGCGATCATCGTCGTTGGAGATTGGGTAAGTACTTGTTGAATAGAATTATACTTTCAGTTTTCGGATGCCTGAGTTGTTGTTTTCAAAATGTATGCATGGAGAACAGGTCCTGTCCCTTCTCACATTAGCTGCTGCTTGCTCGACAGCAAGCGTTGTCGATATTCTTCTTCACTCAGACAGTTCGTATTGCCCGTCGAAGCTCTGCAGGAGATATCAAATATCTGCTGCCATGGCTTTCTTTTCATGGTTTTTGTCTTTTGCTTCTTCCCTTTTCAATCTTTGGTTACTTCCATCCTTATAATCTCTAGTTTTTATGACTCCCAAGTCCTAATTTGCAGAAGCTTTTGTGTTTCTTTCTCTCTCTCTCTTTTTTTTTCTTCCTCTAACAAATGTTCAATATCTATAGACTTTACACATTTTGTTTTGAAGTACAAATTTGTACACTTATATTGTTCAAGTTAAATGATATCTTTCAGTCTTCTCCTCCTTTA GCCACACCCAAAATTCCGCTGTTGATTTGGTTTGTGAAGCTCTGAGAACGTGCCACCCAAATACAAAGAAAACAACCTCCAACTGTCCGTTCCAACGCCTCGCCTCTCTCTTCTCTACGCTCCGCTTTGCAGTTACACCATCTCCGCTTTCCCCACCCATTCAAACTTCAAACTCGCCGGAAAAAACCCACCCACCAATTCGATAGACCCATTCTTCATCCGGACCAAATCTTTTCACTCCCTAATCGAAATGGGTTCTGTTGATTTGGGTTTGTGCGGCCATGGTTGATCATTGCGGCGATTAAGATGAGTGGTTCTAAAGGTAAGAAGAAATGGGGATGTTGCAGAGTTAGGGATTGCTTTCGCCATGGACTCCGTTCCTGGGTCGGTGGGCACCGGTGCCAGTTTCTCTTTAAGATTGGGGCAGACTGTGTTCTCGTCTGCCTCGCTTCTTTTCATGTCATTGGGTGTTGAGTTCTATAGCTACACTGCTTTCTGGATCTATCTGGAATGTGATTGTTTCAAACATGGGTTATATGCAAAGAACTTCATTCAGAAGATTTACATAACTTGTGATGAGAGTATTCAGTTTAAAGTAATATCATTCATGAGATTAGCCGAACTTGCTCGTCTCTTTGTTTATCACATAGTTTGTTCTGCCGGGTATTCTTGGATTTTTTCTTTTGATGTTCATATTTCCATTGTTGAATTTCATTGCAGCTACCTTGTAACAGTGATGGGTTTGGTCATACCCTGGAGCTTCACTTTAGCATTGGTTGATGGCTACTCTGTTCTCGTAAAATGTCCTCTTCGACAGCCCGGAATACTTGCGATCATCGTCGTTGGAGATTGGGTCCTGTCCCTTCTCACATTAGCTGCTGCTTGCTCGACAGCAAGCGTTGTCGATATTCTTCTTCACTCAGACAGTTCGTATTGCCCGTCGAAGCTCTGCAGGAGATATCAAATATCTGCTGCCATGGCTTTCTTTTCATGGTTTTTGTCTTTTGCTTCTTCCCTTTTCAATCTTTGGTTACTTCCATCCTTATAATCTCTAGTTTTTATGACTCCCAAGTCCTAATTTGCAGAAGCTTTTGTGTTTCTTTCTCTCTCTCTCTTTTTTTTTCTTCCTCTAACAAATGTTCAATATCTATAGACTTTACACATTTTGTTTTGAAGTACAAATTTGTACACTTATATTGTTCAAGTTAAATGATATCTTTCAGTCTTCTCCTCCTTTA ATGGACTCCGTTCCTGGGTCGGTGGGCACCGGTGCCAGTTTCTCTTTAAGATTGGGGCAGACTGTGTTCTCGTCTGCCTCGCTTCTTTTCATGTCATTGGGTGTTGAGTTCTATAGCTACACTGCTTTCTGGATCTATCTGGAATGTGATTGTTTCAAACATGGGTTATATGCAAAGAACTTCATTCAGAAGATTTACATAACTTGTGATGAGAGTATTCAGTTTAAAGTAATATCATTCATGAGATTAGCCGAACTTGCTCGTCTCTTTGTTTATCACATAGTTTGTTCTGCCGGGTATTCTTGGATTTTTTCTTTTGATGTTCATATTTCCATTGTTGAATTTCATTGCAGCTACCTTGTAACAGTGATGGGTTTGGTCATACCCTGGAGCTTCACTTTAGCATTGGTTGATGGCTACTCTGTTCTCGTAAAATGTCCTCTTCGACAGCCCGGAATACTTGCGATCATCGTCGTTGGAGATTGGGTCCTGTCCCTTCTCACATTAGCTGCTGCTTGCTCGACAGCAAGCGTTGTCGATATTCTTCTTCACTCAGACAGTTCGTATTGCCCGTCGAAGCTCTGCAGGAGATATCAAATATCTGCTGCCATGGCTTTCTTTTCATGGTTTTTGTCTTTTGCTTCTTCCCTTTTCAATCTTTGGTTACTTCCATCCTTATAA MDSVPGSVGTGASFSLRLGQTVFSSASLLFMSLGVEFYSYTAFWIYLECDCFKHGLYAKNFIQKIYITCDESIQFKVISFMRLAELARLFVYHIVCSAGYSWIFSFDVHISIVEFHCSYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILAIIVVGDWVLSLLTLAAACSTASVVDILLHSDSSYCPSKLCRRYQISAAMAFFSWFLSFASSLFNLWLLPSL Homology
BLAST of CaUC09G174470 vs. NCBI nr
Match: XP_038901622.1 (CASP-like protein 5C1 [Benincasa hispida]) HSP 1 Score: 251.5 bits (641), Expect = 6.8e-63 Identity = 149/226 (65.93%), Postives = 151/226 (66.81%), Query Frame = 0
BLAST of CaUC09G174470 vs. NCBI nr
Match: XP_004145336.1 (CASP-like protein 5C1 [Cucumis sativus] >KGN61776.1 hypothetical protein Csa_006746 [Cucumis sativus]) HSP 1 Score: 248.8 bits (634), Expect = 4.4e-62 Identity = 148/226 (65.49%), Postives = 149/226 (65.93%), Query Frame = 0
BLAST of CaUC09G174470 vs. NCBI nr
Match: XP_008459268.1 (PREDICTED: CASP-like protein 5C1 [Cucumis melo]) HSP 1 Score: 247.3 bits (630), Expect = 1.3e-61 Identity = 147/226 (65.04%), Postives = 148/226 (65.49%), Query Frame = 0
BLAST of CaUC09G174470 vs. NCBI nr
Match: KAA0045942.1 (CASP-like protein 5C1 [Cucumis melo var. makuwa] >TYK13646.1 CASP-like protein 5C1 [Cucumis melo var. makuwa]) HSP 1 Score: 247.3 bits (630), Expect = 1.3e-61 Identity = 147/226 (65.04%), Postives = 148/226 (65.49%), Query Frame = 0
BLAST of CaUC09G174470 vs. NCBI nr
Match: XP_022947184.1 (CASP-like protein 5C1 [Cucurbita moschata] >XP_023533781.1 CASP-like protein 5C1 [Cucurbita pepo subsp. pepo] >KAG6605092.1 CASP-like protein 5C1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 245.4 bits (625), Expect = 4.8e-61 Identity = 145/226 (64.16%), Postives = 147/226 (65.04%), Query Frame = 0
BLAST of CaUC09G174470 vs. ExPASy Swiss-Prot
Match: Q10EJ2 (CASP-like protein 5C1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767900 PE=2 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.5e-38 Identity = 97/220 (44.09%), Postives = 122/220 (55.45%), Query Frame = 0
BLAST of CaUC09G174470 vs. ExPASy Swiss-Prot
Match: B8BPI2 (CASP-like protein 5C1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38237 PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.0e-37 Identity = 96/220 (43.64%), Postives = 121/220 (55.00%), Query Frame = 0
BLAST of CaUC09G174470 vs. ExPASy Swiss-Prot
Match: Q3ECT8 (CASP-like protein 5C3 OS=Arabidopsis thaliana OX=3702 GN=At1g49405 PE=2 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.0e-33 Identity = 94/226 (41.59%), Postives = 117/226 (51.77%), Query Frame = 0
BLAST of CaUC09G174470 vs. ExPASy Swiss-Prot
Match: B6U300 (CASP-like protein 5C1 OS=Zea mays OX=4577 PE=2 SV=2) HSP 1 Score: 143.3 bits (360), Expect = 3.4e-33 Identity = 92/220 (41.82%), Postives = 114/220 (51.82%), Query Frame = 0
BLAST of CaUC09G174470 vs. ExPASy Swiss-Prot
Match: D7LTJ4 (CASP-like protein ARALYDRAFT_485429 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_485429 PE=3 SV=2) HSP 1 Score: 129.0 bits (323), Expect = 6.6e-29 Identity = 83/226 (36.73%), Postives = 107/226 (47.35%), Query Frame = 0
BLAST of CaUC09G174470 vs. ExPASy TrEMBL
Match: A0A0A0LP49 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G239410 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 2.1e-62 Identity = 148/226 (65.49%), Postives = 149/226 (65.93%), Query Frame = 0
BLAST of CaUC09G174470 vs. ExPASy TrEMBL
Match: A0A5D3CT75 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001600 PE=3 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 6.2e-62 Identity = 147/226 (65.04%), Postives = 148/226 (65.49%), Query Frame = 0
BLAST of CaUC09G174470 vs. ExPASy TrEMBL
Match: A0A1S3CB03 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498442 PE=3 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 6.2e-62 Identity = 147/226 (65.04%), Postives = 148/226 (65.49%), Query Frame = 0
BLAST of CaUC09G174470 vs. ExPASy TrEMBL
Match: A0A6J1G621 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111451131 PE=3 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 2.3e-61 Identity = 145/226 (64.16%), Postives = 147/226 (65.04%), Query Frame = 0
BLAST of CaUC09G174470 vs. ExPASy TrEMBL
Match: A0A6J1KXG7 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111499660 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 9.9e-60 Identity = 143/226 (63.27%), Postives = 146/226 (64.60%), Query Frame = 0
BLAST of CaUC09G174470 vs. TAIR 10
Match: AT1G49405.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 144.1 bits (362), Expect = 1.4e-34 Identity = 94/226 (41.59%), Postives = 117/226 (51.77%), Query Frame = 0
BLAST of CaUC09G174470 vs. TAIR 10
Match: AT3G50810.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 125.9 bits (315), Expect = 4.0e-29 Identity = 82/226 (36.28%), Postives = 105/226 (46.46%), Query Frame = 0
BLAST of CaUC09G174470 vs. TAIR 10
Match: AT4G37235.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 112.8 bits (281), Expect = 3.5e-25 Identity = 87/222 (39.19%), Postives = 106/222 (47.75%), Query Frame = 0
BLAST of CaUC09G174470 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 87.8 bits (216), Expect = 1.2e-17 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 0
BLAST of CaUC09G174470 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15 Identity = 51/129 (39.53%), Postives = 77/129 (59.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|