CaUC09G173070 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G173070
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Ty1-copia retrotransposon protein
Location	Ciama_Chr09: 29793173 .. 29794157 (-)
RNA-Seq Expression	CaUC09G173070
Synteny	CaUC09G173070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATCAATAATGGTAAAGTTCTTCAAGGTCTATCAAAGTTGGAGCCTCTGGACGGACCCAATTACCGTCGTTGGTCTTTGAAACTCCTTATATTTTTTGAGCAACTAGAAGTCGATTTCATTCTCACCGGCATCAGATCTGATAACGGTAAGGTTATTGACAAAGGTAAATCTATTATGTTGATTGATCTAAATAGCTCCAAAGTCACGAATCCGGATAGCTCCAAAGTCACAGATCCGTTAGAATCTAGTCAGTCCAGATCCAAATCTACTATAGATCCAGACAAATTTGAGAAAAATAACAAGACAATCAATCATATGACAGACTCTTTATTTTTTTAATTATGAAATTGGAGAGTTGTGCGACACTCTGGAATCTTGGTATGGAGGAGATGATGTAGGCTGTAAGAAGTATGTTGTTGGAAAATGGTTGCAATTCTAGATGATGGATGAGAAACCACATGTGGATCAAGTGAATGAATACGAGAATCTGGTGGTGAATGTTCTGTCCGAAGGTATGCAAATGTGTGAAATTCTCCAAGCGAATGTACTGCTTAAGAAATTTCCATCGTCTGGAGTGATTATAGAAATCACCTGAAACACAAGAAGAAAGATTTGCAGGAATTGATCACTCACATGCGCACAGAGGAAGCAAATCGACATAAAGATATGCTTATCTCTGAAAATTTAAATTTCGTTAATGCTAACCTGGTTGAGTCTTCTGTTGTTAACAAAAATAGATTAAAAAATAATAGCAAGCAATCTATCAAAAATAATTTATATAAGAAGAAGAAACATCACAAAGTTGCTGGTGGGAAGATAGAAAAGAAAAAATTAATATGCTATGTCTGTTGAAAACCAGGACACTAATCCTACCAGTGTAACAAGAGAAAAGGAAGGCCAGATCAACGACCAATCACATAGCCCAATCTTGCTGAGCAGAATGACATCATTGTTGTTGTGGTCGTGGAAGCCCACCTAG

mRNA sequence

ATGTCGATCAATAATGGTAAAGTTCTTCAAGGTCTATCAAAGTTGGAGCCTCTGGACGGACCCAATTACCGTCGTTGGTCTTTGAAACTCCTTATATTTTTTGAGCAACTAGAAGTCGATTTCATTCTCACCGGCATCAGATCTGATAACGGTAAGGTTATTGACAAAGGTAAATCTATTATGTTGATTGATCTAAATAGCTCCAAAGTCACGAATCCGGATAGCTCCAAAACTCTTTATTTTTTTAATTATGAAATTGGAGAGTTGTGCGACACTCTGGAATCTTGGTATGGAGGAGATGATATGATGGATGAGAAACCACATGTGGATCAAGTGAATGAATACGAGAATCTGGTGGTGAATGTTCTGTCCGAAGAAATTTCCATCGTCTGGAGTGATTATAGAAATCACCTGAAACACAAGAAGAAAGATTTGCAGGAATTGATCACTCACATGCGCACAGAGGAAGCAAATCGACATAAAGATATGCTTATCTCTGAAAATTTAAATTTCGTTAATGCTAACCTGGACACTAATCCTACCAGTGTAACAAGAGAAAAGGAAGGCCAGATCAACGACCAATCACATAGCCCAATCTTGCTGAGCAGAATGACATCATTGTTGTTGTGGTCGTGGAAGCCCACCTAG

Coding sequence (CDS)

ATGTCGATCAATAATGGTAAAGTTCTTCAAGGTCTATCAAAGTTGGAGCCTCTGGACGGACCCAATTACCGTCGTTGGTCTTTGAAACTCCTTATATTTTTTGAGCAACTAGAAGTCGATTTCATTCTCACCGGCATCAGATCTGATAACGGTAAGGTTATTGACAAAGGTAAATCTATTATGTTGATTGATCTAAATAGCTCCAAAGTCACGAATCCGGATAGCTCCAAAACTCTTTATTTTTTTAATTATGAAATTGGAGAGTTGTGCGACACTCTGGAATCTTGGTATGGAGGAGATGATATGATGGATGAGAAACCACATGTGGATCAAGTGAATGAATACGAGAATCTGGTGGTGAATGTTCTGTCCGAAGAAATTTCCATCGTCTGGAGTGATTATAGAAATCACCTGAAACACAAGAAGAAAGATTTGCAGGAATTGATCACTCACATGCGCACAGAGGAAGCAAATCGACATAAAGATATGCTTATCTCTGAAAATTTAAATTTCGTTAATGCTAACCTGGACACTAATCCTACCAGTGTAACAAGAGAAAAGGAAGGCCAGATCAACGACCAATCACATAGCCCAATCTTGCTGAGCAGAATGACATCATTGTTGTTGTGGTCGTGGAAGCCCACCTAG

Protein sequence

MSINNGKVLQGLSKLEPLDGPNYRRWSLKLLIFFEQLEVDFILTGIRSDNGKVIDKGKSIMLIDLNSSKVTNPDSSKTLYFFNYEIGELCDTLESWYGGDDMMDEKPHVDQVNEYENLVVNVLSEEISIVWSDYRNHLKHKKKDLQELITHMRTEEANRHKDMLISENLNFVNANLDTNPTSVTREKEGQINDQSHSPILLSRMTSLLLWSWKPT

Homology

[Close]

BLAST of CaUC09G173070 vs. NCBI nr
Match: XP_008456453.1 (PREDICTED: uncharacterized protein LOC103496396 [Cucumis melo])

HSP 1 Score: 157.9 bits (398), Expect = 9.7e-35
Identity = 112/255 (43.92%), Postives = 134/255 (52.55%), Query Frame = 0


Query: 1   MSI-NNGKVLQGLSKLEPLDGPNYRRWSLKLLIFFEQLEVDFILT--------------- 60
           MSI  + K+L  LSKLEPLDG NYRRWS KLLIFFEQLEVD++LT               
Sbjct: 1   MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDPPTTTSTS 60

Query: 61  -GIRSDNG-----KVIDKGKSIMLIDLNSSKVTN-----------PDSSKTLYFFNYEIG 120
               S  G      V D+ K   +ID       N            D    L+       
Sbjct: 61  SNPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121 ELCDTLESWYGGDD---------------MMDEKPHVDQVNEYENLVVNVLSEEISIV-- 180
           ++  TLES YGGDD               M D+KP V+Q++EYENLV NVLSE++ +   
Sbjct: 121 DIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEDMKMCEI 180

Query: 181 -------------WSDYRNHLKHKKKD--LQELITHMRTEEANRHKDMLISENLNFVNAN 191
                        W+DYRNHLKHKKKD  LQELI+HMRTEEANR KD L S+NLN VNAN
Sbjct: 181 LQANVLLENFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNAN 240

[Close]

BLAST of CaUC09G173070 vs. NCBI nr
Match: KAA0040554.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 156.4 bits (394), Expect = 2.8e-34
Identity = 109/256 (42.58%), Postives = 137/256 (53.52%), Query Frame = 0


Query: 1   MSI-NNGKVLQGLSKLEPLDGPNYRRWSLKLLIFFEQLEVDFIL--------------TG 60
           MSI  + K+L  LSKLEPLDG NYRRWS KLLIFFEQLEVD+IL              T 
Sbjct: 1   MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYILTTDLPTSDPPTTTSTS 60

Query: 61  IRSDNGKVIDKGKSIMLIDLNSSKVTNPD----SSKT---------------LYFFNYEI 120
              ++ ++I      +   +   +V +P+     +KT               L+      
Sbjct: 61  SDPESSRIIYGAVLAVTEQVKKDQVIDPEKYAKDNKTVRAHLLNHMSDPMFDLFIIQKSA 120

Query: 121 GELCDTLESWYGGDD---------------MMDEKPHVDQVNEYENLVVNVLSEEISIV- 180
            ++  TLES YGGDD               M D+KP V+Q++EYENLV NVLSE + +  
Sbjct: 121 KDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCE 180

Query: 181 --------------WSDYRNHLKHKKKD--LQELITHMRTEEANRHKDMLISENLNFVNA 191
                         W+DYRNHLKHKKKD  LQELI+HMRTEEANR KD L S+NLN VNA
Sbjct: 181 ILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNA 240

[Close]

BLAST of CaUC09G173070 vs. NCBI nr
Match: KAA0042223.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 156.0 bits (393), Expect = 3.7e-34
Identity = 113/255 (44.31%), Postives = 132/255 (51.76%), Query Frame = 0


Query: 1   MSINNG-KVLQGLSKLEPLDGPNYRRWSLKLLIFFEQLEVDFILT--------------- 60
           MSI    K+L  LSKLEPLDG NYRRWS KLLIFFEQLEVD++LT               
Sbjct: 1   MSIKTSYKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTFDPPTTTSTS 60

Query: 61  -GIRSDNG-----KVIDKGKSIMLIDLNSSKVTN-----------PDSSKTLYFFNYEIG 120
               S  G      V D+ K   +ID       N            D    L+       
Sbjct: 61  SDPESSTGPLTAIAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121 ELCDTLESWYGGDD---------------MMDEKPHVDQVNEYENLVVNVLSEEISIV-- 180
           ++  TLES YGGDD               M D+KP V+Q++EYENLV NVLSE + +   
Sbjct: 121 DIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181 -------------WSDYRNHLKHKKKD--LQELITHMRTEEANRHKDMLISENLNFVNAN 191
                        W+DYRNHLKHKKKD  LQELI+HMRTEEANR KD L S+NLN VNAN
Sbjct: 181 LQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLDSQNLNSVNAN 240

[Close]

BLAST of CaUC09G173070 vs. NCBI nr
Match: TYK26791.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 155.6 bits (392), Expect = 4.8e-34
Identity = 112/255 (43.92%), Postives = 132/255 (51.76%), Query Frame = 0


Query: 1   MSINNG-KVLQGLSKLEPLDGPNYRRWSLKLLIFFEQLEVDFILT--------------- 60
           MSI    K+L  LSKLEPLDG NYRRWS KLLIFFEQLEVD++LT               
Sbjct: 1   MSIKTSYKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTFDPPTTTSTS 60

Query: 61  -GIRSDNG-----KVIDKGKSIMLIDLNSSKVTN-----------PDSSKTLYFFNYEIG 120
               S  G      V D+ K   +ID       N            D    L+       
Sbjct: 61  SDPESSTGPLTAIAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121 ELCDTLESWYGGDD---------------MMDEKPHVDQVNEYENLVVNVLSEEISIV-- 180
           ++  TLES YGGDD               M D+KP V+Q++EYENLV NVLSE + +   
Sbjct: 121 DIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181 -------------WSDYRNHLKHKKKD--LQELITHMRTEEANRHKDMLISENLNFVNAN 191
                        W+DYRNHLKHKKKD  LQELI+HMRTEEANR KD L S+NLN VNAN
Sbjct: 181 LQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNAN 240

[Close]

BLAST of CaUC09G173070 vs. NCBI nr
Match: TYK05597.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 155.2 bits (391), Expect = 6.3e-34
Identity = 108/256 (42.19%), Postives = 137/256 (53.52%), Query Frame = 0


Query: 1   MSI-NNGKVLQGLSKLEPLDGPNYRRWSLKLLIFFEQLEVDFIL--------------TG 60
           MSI  + K+L  LSKLEPLDG NYRRWS KLLIFFEQLEVD+IL              T 
Sbjct: 1   MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYILTTDLPTSDPPTTTSTS 60

Query: 61  IRSDNGKVIDKGKSIMLIDLNSSKVTNPD----SSKT---------------LYFFNYEI 120
              ++ ++I      +   +   +V +P+     +KT               L+      
Sbjct: 61  SDPESSRIIYGAVLAVTEQVKKDQVIDPEKYAKDNKTVRAHLLNHMSDPMFDLFIIQKSA 120

Query: 121 GELCDTLESWYGGDD---------------MMDEKPHVDQVNEYENLVVNVLSEEISIV- 180
            ++  TLES YGGDD               M D+KP V+Q++EYENLV NVLSE + +  
Sbjct: 121 KDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCE 180

Query: 181 --------------WSDYRNHLKHKKKD--LQELITHMRTEEANRHKDMLISENLNFVNA 191
                         W+DYRNHLKHKKKD  LQELI+HMRTEEAN+ KD L S+NLN VNA
Sbjct: 181 ILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANKLKDKLASQNLNSVNA 240

[Close]

BLAST of CaUC09G173070 vs. ExPASy TrEMBL
Match: A0A1S3C3Z1 (uncharacterized protein LOC103496396 OS=Cucumis melo OX=3656 GN=LOC103496396 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.7e-35
Identity = 112/255 (43.92%), Postives = 134/255 (52.55%), Query Frame = 0


Query: 1   MSI-NNGKVLQGLSKLEPLDGPNYRRWSLKLLIFFEQLEVDFILT--------------- 60
           MSI  + K+L  LSKLEPLDG NYRRWS KLLIFFEQLEVD++LT               
Sbjct: 1   MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSDPPTTTSTS 60

Query: 61  -GIRSDNG-----KVIDKGKSIMLIDLNSSKVTN-----------PDSSKTLYFFNYEIG 120
               S  G      V D+ K   +ID       N            D    L+       
Sbjct: 61  SNPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121 ELCDTLESWYGGDD---------------MMDEKPHVDQVNEYENLVVNVLSEEISIV-- 180
           ++  TLES YGGDD               M D+KP V+Q++EYENLV NVLSE++ +   
Sbjct: 121 DIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEDMKMCEI 180

Query: 181 -------------WSDYRNHLKHKKKD--LQELITHMRTEEANRHKDMLISENLNFVNAN 191
                        W+DYRNHLKHKKKD  LQELI+HMRTEEANR KD L S+NLN VNAN
Sbjct: 181 LQANVLLENFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNAN 240

[Close]

BLAST of CaUC09G173070 vs. ExPASy TrEMBL
Match: A0A5A7TAR9 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001180 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.4e-34
Identity = 109/256 (42.58%), Postives = 137/256 (53.52%), Query Frame = 0


Query: 1   MSI-NNGKVLQGLSKLEPLDGPNYRRWSLKLLIFFEQLEVDFIL--------------TG 60
           MSI  + K+L  LSKLEPLDG NYRRWS KLLIFFEQLEVD+IL              T 
Sbjct: 1   MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYILTTDLPTSDPPTTTSTS 60

Query: 61  IRSDNGKVIDKGKSIMLIDLNSSKVTNPD----SSKT---------------LYFFNYEI 120
              ++ ++I      +   +   +V +P+     +KT               L+      
Sbjct: 61  SDPESSRIIYGAVLAVTEQVKKDQVIDPEKYAKDNKTVRAHLLNHMSDPMFDLFIIQKSA 120

Query: 121 GELCDTLESWYGGDD---------------MMDEKPHVDQVNEYENLVVNVLSEEISIV- 180
            ++  TLES YGGDD               M D+KP V+Q++EYENLV NVLSE + +  
Sbjct: 121 KDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCE 180

Query: 181 --------------WSDYRNHLKHKKKD--LQELITHMRTEEANRHKDMLISENLNFVNA 191
                         W+DYRNHLKHKKKD  LQELI+HMRTEEANR KD L S+NLN VNA
Sbjct: 181 ILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNA 240

[Close]

BLAST of CaUC09G173070 vs. ExPASy TrEMBL
Match: A0A5A7TG73 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G007360 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.8e-34
Identity = 113/255 (44.31%), Postives = 132/255 (51.76%), Query Frame = 0


Query: 1   MSINNG-KVLQGLSKLEPLDGPNYRRWSLKLLIFFEQLEVDFILT--------------- 60
           MSI    K+L  LSKLEPLDG NYRRWS KLLIFFEQLEVD++LT               
Sbjct: 1   MSIKTSYKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTFDPPTTTSTS 60

Query: 61  -GIRSDNG-----KVIDKGKSIMLIDLNSSKVTN-----------PDSSKTLYFFNYEIG 120
               S  G      V D+ K   +ID       N            D    L+       
Sbjct: 61  SDPESSTGPLTAIAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121 ELCDTLESWYGGDD---------------MMDEKPHVDQVNEYENLVVNVLSEEISIV-- 180
           ++  TLES YGGDD               M D+KP V+Q++EYENLV NVLSE + +   
Sbjct: 121 DIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181 -------------WSDYRNHLKHKKKD--LQELITHMRTEEANRHKDMLISENLNFVNAN 191
                        W+DYRNHLKHKKKD  LQELI+HMRTEEANR KD L S+NLN VNAN
Sbjct: 181 LQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLDSQNLNSVNAN 240

[Close]

BLAST of CaUC09G173070 vs. ExPASy TrEMBL
Match: A0A5D3DSQ3 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00930 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.3e-34
Identity = 112/255 (43.92%), Postives = 132/255 (51.76%), Query Frame = 0


Query: 1   MSINNG-KVLQGLSKLEPLDGPNYRRWSLKLLIFFEQLEVDFILT--------------- 60
           MSI    K+L  LSKLEPLDG NYRRWS KLLIFFEQLEVD++LT               
Sbjct: 1   MSIKTSYKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTFDPPTTTSTS 60

Query: 61  -GIRSDNG-----KVIDKGKSIMLIDLNSSKVTN-----------PDSSKTLYFFNYEIG 120
               S  G      V D+ K   +ID       N            D    L+       
Sbjct: 61  SDPESSTGPLTAIAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKSAK 120

Query: 121 ELCDTLESWYGGDD---------------MMDEKPHVDQVNEYENLVVNVLSEEISIV-- 180
           ++  TLES YGGDD               M D+KP V+Q++EYENLV NVLSE + +   
Sbjct: 121 DIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCEI 180

Query: 181 -------------WSDYRNHLKHKKKD--LQELITHMRTEEANRHKDMLISENLNFVNAN 191
                        W+DYRNHLKHKKKD  LQELI+HMRTEEANR KD L S+NLN VNAN
Sbjct: 181 LQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANRLKDKLASQNLNSVNAN 240

[Close]

BLAST of CaUC09G173070 vs. ExPASy TrEMBL
Match: A0A5D3C1A6 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00490 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.0e-34
Identity = 108/256 (42.19%), Postives = 137/256 (53.52%), Query Frame = 0


Query: 1   MSI-NNGKVLQGLSKLEPLDGPNYRRWSLKLLIFFEQLEVDFIL--------------TG 60
           MSI  + K+L  LSKLEPLDG NYRRWS KLLIFFEQLEVD+IL              T 
Sbjct: 1   MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYILTTDLPTSDPPTTTSTS 60

Query: 61  IRSDNGKVIDKGKSIMLIDLNSSKVTNPD----SSKT---------------LYFFNYEI 120
              ++ ++I      +   +   +V +P+     +KT               L+      
Sbjct: 61  SDPESSRIIYGAVLAVTEQVKKDQVIDPEKYAKDNKTVRAHLLNHMSDPMFDLFIIQKSA 120

Query: 121 GELCDTLESWYGGDD---------------MMDEKPHVDQVNEYENLVVNVLSEEISIV- 180
            ++  TLES YGGDD               M D+KP V+Q++EYENLV NVLSE + +  
Sbjct: 121 KDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMCE 180

Query: 181 --------------WSDYRNHLKHKKKD--LQELITHMRTEEANRHKDMLISENLNFVNA 191
                         W+DYRNHLKHKKKD  LQELI+HMRTEEAN+ KD L S+NLN VNA
Sbjct: 181 ILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEANKLKDKLASQNLNSVNA 240

The following BLAST results are available for this feature:

BLAST of CaUC09G173070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456453.1	9.7e-35	43.92	PREDICTED: uncharacterized protein LOC103496396 [Cucumis melo]	[more]
KAA0040554.1	2.8e-34	42.58	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0042223.1	3.7e-34	44.31	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK26791.1	4.8e-34	43.92	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK05597.1	6.3e-34	42.19	ty1-copia retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of CaUC09G173070 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC09G173070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C3Z1	4.7e-35	43.92	uncharacterized protein LOC103496396 OS=Cucumis melo OX=3656 GN=LOC103496396 PE=...	[more]
A0A5A7TAR9	1.4e-34	42.58	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TG73	1.8e-34	44.31	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DSQ3	2.3e-34	43.92	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3C1A6	3.0e-34	42.19	Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of CaUC09G173070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 135..155
None	No IPR available	PANTHER	PTHR47592	PBF68 PROTEIN	coord: 93..188
None	No IPR available	PANTHER	PTHR47592:SF14	GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 93..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G173070.1	CaUC09G173070.1	mRNA