CaUC09G160370 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAAGAAAAAAGGGGAAACTGCCGAGCAGCTGAGCGATTCCTGTTTCTAAGAATAAAAGTAAGCTTTTTCGTCTTCCTCCAACCTCTTTTCTATTCCCTTTCTTTATTTCACCAACTTCCCACAGAAGAAGAAGAAGAAGAAACAGCAGCAGCAGCCAGGATAAGAAGAGGAGCTTTCGTTTCCAGAAGGAAGGTCGGAGAGTGATAGACAGTGACATATAATTTCAAGGGTATCTCTTATTTTCCTTTGAACTAACTTCTATTTTTCTCTCTCTCTTTCTCTGTCTTTCCTTTACATTTTCCATTGGGGGGTTTTCAAGTGCGATATACTTATTAACATCATGACTCTTCTGATTCTCAGGAGCTGCTCTTTGATCTTCTTTCCTGGAATCGAATTTTCCTTGGGTTTTGTTTTCCCCTCCAAATCCTTATCACTTGGGGGTTTTTCATTCATGGGGTAAATTTTCTAATTAGCTTAATTGATGGGTTTTTGAAGTCTTCTTGTTATTATAATTTGGGGAGTTTTGATTACATATTTAGATATATGTATATATGTATTGGGAGGAATCAATATGAAATTCAGCAGTTGGGGAGTTTGCTTTTGGCTAGATCGGAATAATGCTGTGATTTAGCTTAGCTTTTTTTATTAAATTTCTATTGGTTTTGTTTGGCTCAAGTATGGATTATTAAGAACTTGTTCGAGCTGATGTCCTGTAGCTGCTGTGTTCTCCATTGTTCATTTAATTTAAAAGCATAAGGTTTCTCTCACTTCTTAGCTACTTTATGTTTATTCTTTAAGTTAATTAAAAGTATTCTCTGGGTATGCTTGATGTTTGTTGACTATGTTGAAAAGCTAACAACTTAAAGCTTCTAAAACTAGTGTTGATTTATTGTGGTATATCTATCTCGAGTTTAGATTTCTGCAATGTTATTCCTTCCACCTTCCATATTGATAATTCATGTGTTTAGGCTTTGTAATATTAATAATTCATATGCTTTGGCCTTGTGTTATTTTCTTATATGTACAAGGCTTGAGTTGACTTAATGGTTAATAATGGCCAATGTAAATGATAAAAGGTTTAAAGGTATTAGGAGGTCATTAGTCAGTCAATATGTTTAGTTAGTTTGTTATCCGTTTGTTTGTTATTCTGTTTGTGCGTTGGACTTATATTTCTCTTATGAAAGCCATTTGCTGACTGATCCATAAAATCAATAATATCGAAGGGTTCAAGCCTCGATAACGGATTTAATATTCTGAGAGTTTTTTTTCCCCCTATAATGAACCATACTTTCGTTGAGGAAAAAAAAAGAGAGAATACAAAAGCATCCAAAAATAACCAATCCCATAAAAAGAGGGATTCTCACTATAAAGAGAAGGAGACCAAGTGAGCAAAATAAGACCTAAATGATAATTACAGAAAGAATTTGACACTGACCCCCACTGAGAAATATGGAACCTAGTAAGGTATCAAATATCCCTACCGTCCTGCTGCTCCACCCCTCTAACAATCCTATTGTCCCAGAGATTTAAATATTGAGATTATATTGAAAAGGTCAAATTTTCTCCGACCTAGAGATTTAAATAGTTTTGGGCCCAATGATGATTTTACAGTCATTATTATGATTATTGCTATGTGAGGCCAGTCCAAATATCAATAGTTATAGAATGTTGTTCATACGCTGCTACTATAAGCTTTGTCATCTGGAAAACTCCAAAGTTCCCGATCATTCAGATTTGTATATTCCACTATTAGTGTTTTATCTTCTGAAAGTCCTGTCAAACTATTTGTAGTCATCTTCTCCATAGCTTACATGGTTTGAACTTTGAAAGGGATTGGCAGGTTAGATCAGATGTATATACGGAGTACACCTACCCATCTAGACAAGATTCTATAAGAATATGTGTGTATATATAGTAATTTCAATTATGAACATATTCTTTGATGCATCTTTTGTCAATAATCTTTGTTTATTCGTTAATAAACCATTTTAATCTGTTAATGCTCAAGTAGCTTGTATTGTGTGCAGTATATAATATAGCTTTCCAGTCAGTATAAATCATCAGGTTTAATTTCCCATCAACCATATCGTGGTATTAGATCTAAGAAGTGATTACTTGTTATGAGACTTAACAATGCTATCATTTAAATTATAAAAATACATTATCTAATTGAATCTGATTCAAGTTTTCTAGTCCCCTCTGAAATGTTTCCTTTGAAATGCAGATCTAGCATAGTGTGTTTAGCATTGATTTGATGACATGAGGTGCTTGCAGGTGTCTTGTGAATATTTTGAGCAGGTATCTATCAGTTATATGATCACGTTTGTTTGTAACAGAACAGTGGTTGTCTTGGATGCTACACAAAGCCGAAACTAAAAACTGAGCTGAATGAACCATCGAAAGGTCAACAAATTCAGTGTCATGGACTAAAGAAACCCAGCATATCAGAGGATTTCTGGACTACTAGTACATTTGATGTGGACAACAGTGCAGGTCAATCACAAGGAAGTATGTCATCAATGAGTACAATCAACCAGATGCACGATCCACATGGTAGCTCGGGCAATGTACACAACCCTTCAGAGTTTATAAATCATGGTGATTATCTCCCCTTCTCACTCTAAACTTTCAGTTACTCAATCGACCATGTCCAAGATAGTTAAGAAGAACAGAAATTATAAGGAAAATTAACTGTACTTCGAGCCTTAGACTGTAAATGGATTATTTGATTACGTTTCTAGTGTGTATTTTGCCAAATTTTTCATTTGCGATACCGTTTTACAACACGATAGGCTCCTTAATTTTTTCTATGTGATTATCCCGTTTCTTTGAAGATCGGCATTGGCACAAGTAACTATATTTGGATCTTGGTTGTAGGCCTTCTTCTGTGGAATCAAACTAGGCAACGCTGGACAGGGAATAAACGATCCGAAAACCGAGCACCGCAGTTTCAAGAACCCAAGTTAGAGTAAGCTGCTCTCTTGTCTGGCTTATTAACATAATCGAACATCAGTACTTCGCAGTGGTAAATCTTACTCGGGTTTCCTCTTTGCAGTTGGAATGCAACCTATGAAAGTTTACTAGGGAGCAACAAGCCATTTCGTCAACCTATTCCGCTCAGCGTAAGTCTTGACCTGTCAAAACTCTTTCATGTGCTGGAAACCAAATCGAATTGAATCATGGATTGATGTTCATTAAAACGTGCAGGAAATGGTAGATTTTCTTGTGGATGTATGGGAACAAGAAGGGTTGTATGATTGATTAATTTGAAGGGTGCACAAGGCTTCGTTTGGAAGAAGTTGAATCATAATCACACTGTCAAGAGCTTCATTTGAACCATTGAAATCTGCCTTGTATTTGCTGAAACGCATTCAAATTAACATTTTCCCTGCTGCCTGCCTATTTTTGGTGCTTGGTTTGTTTTTCTCTTAATGCCTTGGTTTGGTAATTGCTGTAGAGTTTTATATCTTTACTCTGTTGTAGAAAATTCAGCTGTGATGGAAATTACTATTTTTGCAAACTATTTTTCCTTCCTCCAAATACTGATAAACAAATCTCAAGCATAATTTTTCGTTAA AGAAAAGAAAAAAGGGGAAACTGCCGAGCAGCTGAGCGATTCCTGTTTCTAAGAATAAAAGTAAGCTTTTTCGTCTTCCTCCAACCTCTTTTCTATTCCCTTTCTTTATTTCACCAACTTCCCACAGAAGAAGAAGAAGAAGAAACAGCAGCAGCAGCCAGGATAAGAAGAGGAGCTTTCGTTTCCAGAAGGAAGGTCGGAGAGTGATAGACAGTGACATATAATTTCAAGGGAGCTGCTCTTTGATCTTCTTTCCTGGAATCGAATTTTCCTTGGGTTTTGTTTTCCCCTCCAAATCCTTATCACTTGGGGGTTTTTCATTCATGGGCTTACATGGTTTGAACTTTGAAAGGGATTGGCAGAACAGTGGTTGTCTTGGATGCTACACAAAGCCGAAACTAAAAACTGAGCTGAATGAACCATCGAAAGGTCAACAAATTCAGTGTCATGGACTAAAGAAACCCAGCATATCAGAGGATTTCTGGACTACTAGTACATTTGATGTGGACAACAGTGCAGGTCAATCACAAGGAAGTATGTCATCAATGAGTACAATCAACCAGATGCACGATCCACATGGTAGCTCGGGCAATGTACACAACCCTTCAGAGTTTATAAATCATGGCCTTCTTCTGTGGAATCAAACTAGGCAACGCTGGACAGGGAATAAACGATCCGAAAACCGAGCACCGCAGTTTCAAGAACCCAAGTTAGATTGGAATGCAACCTATGAAAGTTTACTAGGGAGCAACAAGCCATTTCGTCAACCTATTCCGCTCAGCGAAATGGTAGATTTTCTTGTGGATGTATGGGAACAAGAAGGGTTGTATGATTGATTAATTTGAAGGGTGCACAAGGCTTCGTTTGGAAGAAGTTGAATCATAATCACACTGTCAAGAGCTTCATTTGAACCATTGAAATCTGCCTTGTATTTGCTGAAACGCATTCAAATTAACATTTTCCCTGCTGCCTGCCTATTTTTGGTGCTTGGTTTGTTTTTCTCTTAATGCCTTGGTTTGGTAATTGCTGTAGAGTTTTATATCTTTACTCTGTTGTAGAAAATTCAGCTGTGATGGAAATTACTATTTTTGCAAACTATTTTTCCTTCCTCCAAATACTGATAAACAAATCTCAAGCATAATTTTTCGTTAA ATGGGCTTACATGGTTTGAACTTTGAAAGGGATTGGCAGAACAGTGGTTGTCTTGGATGCTACACAAAGCCGAAACTAAAAACTGAGCTGAATGAACCATCGAAAGGTCAACAAATTCAGTGTCATGGACTAAAGAAACCCAGCATATCAGAGGATTTCTGGACTACTAGTACATTTGATGTGGACAACAGTGCAGGTCAATCACAAGGAAGTATGTCATCAATGAGTACAATCAACCAGATGCACGATCCACATGGTAGCTCGGGCAATGTACACAACCCTTCAGAGTTTATAAATCATGGCCTTCTTCTGTGGAATCAAACTAGGCAACGCTGGACAGGGAATAAACGATCCGAAAACCGAGCACCGCAGTTTCAAGAACCCAAGTTAGATTGGAATGCAACCTATGAAAGTTTACTAGGGAGCAACAAGCCATTTCGTCAACCTATTCCGCTCAGCGAAATGGTAGATTTTCTTGTGGATGTATGGGAACAAGAAGGGTTGTATGATTGA MGLHGLNFERDWQNSGCLGCYTKPKLKTELNEPSKGQQIQCHGLKKPSISEDFWTTSTFDVDNSAGQSQGSMSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWTGNKRSENRAPQFQEPKLDWNATYESLLGSNKPFRQPIPLSEMVDFLVDVWEQEGLYD Homology
BLAST of CaUC09G160370 vs. NCBI nr
Match: XP_008461113.1 (PREDICTED: uncharacterized protein LOC103499796 isoform X2 [Cucumis melo] >KAA0058757.1 uncharacterized protein E6C27_scaffold339G002290 [Cucumis melo var. makuwa] >TYK10551.1 uncharacterized protein E5676_scaffold459G002040 [Cucumis melo var. makuwa]) HSP 1 Score: 328.2 bits (840), Expect = 4.3e-86 Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0
BLAST of CaUC09G160370 vs. NCBI nr
Match: XP_038899243.1 (uncharacterized protein LOC120086589 [Benincasa hispida] >XP_038899245.1 uncharacterized protein LOC120086589 [Benincasa hispida] >XP_038899246.1 uncharacterized protein LOC120086589 [Benincasa hispida]) HSP 1 Score: 318.2 bits (814), Expect = 4.4e-83 Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of CaUC09G160370 vs. NCBI nr
Match: XP_008461112.1 (PREDICTED: uncharacterized protein LOC103499796 isoform X1 [Cucumis melo]) HSP 1 Score: 312.8 bits (800), Expect = 1.9e-81 Identity = 146/172 (84.88%), Postives = 155/172 (90.12%), Query Frame = 0
BLAST of CaUC09G160370 vs. NCBI nr
Match: XP_008461114.1 (PREDICTED: uncharacterized protein LOC103499796 isoform X3 [Cucumis melo]) HSP 1 Score: 307.8 bits (787), Expect = 6.0e-80 Identity = 141/155 (90.97%), Postives = 149/155 (96.13%), Query Frame = 0
BLAST of CaUC09G160370 vs. NCBI nr
Match: XP_031745028.1 (uncharacterized protein LOC101208775 isoform X1 [Cucumis sativus] >XP_031745029.1 uncharacterized protein LOC101208775 isoform X1 [Cucumis sativus]) HSP 1 Score: 305.1 bits (780), Expect = 3.9e-79 Identity = 143/155 (92.26%), Postives = 147/155 (94.84%), Query Frame = 0
BLAST of CaUC09G160370 vs. ExPASy TrEMBL
Match: A0A5D3CFJ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002040 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 2.1e-86 Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0
BLAST of CaUC09G160370 vs. ExPASy TrEMBL
Match: A0A1S3CF66 (uncharacterized protein LOC103499796 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499796 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 2.1e-86 Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0
BLAST of CaUC09G160370 vs. ExPASy TrEMBL
Match: A0A1S3CEF0 (uncharacterized protein LOC103499796 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499796 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 9.0e-82 Identity = 146/172 (84.88%), Postives = 155/172 (90.12%), Query Frame = 0
BLAST of CaUC09G160370 vs. ExPASy TrEMBL
Match: A0A0A0KBV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432580 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.0e-80 Identity = 145/158 (91.77%), Postives = 150/158 (94.94%), Query Frame = 0
BLAST of CaUC09G160370 vs. ExPASy TrEMBL
Match: A0A1S3CDH9 (uncharacterized protein LOC103499796 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499796 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 2.9e-80 Identity = 141/155 (90.97%), Postives = 149/155 (96.13%), Query Frame = 0
BLAST of CaUC09G160370 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 188.3 bits (477), Expect = 4.9e-48 Identity = 94/155 (60.65%), Postives = 114/155 (73.55%), Query Frame = 0
BLAST of CaUC09G160370 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). ) HSP 1 Score: 188.3 bits (477), Expect = 4.9e-48 Identity = 94/155 (60.65%), Postives = 114/155 (73.55%), Query Frame = 0
BLAST of CaUC09G160370 vs. TAIR 10
Match: AT3G15770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 164.5 bits (415), Expect = 7.6e-41 Identity = 85/162 (52.47%), Postives = 111/162 (68.52%), Query Frame = 0
BLAST of CaUC09G160370 vs. TAIR 10
Match: AT3G15770.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 163.3 bits (412), Expect = 1.7e-40 Identity = 84/160 (52.50%), Postives = 110/160 (68.75%), Query Frame = 0
BLAST of CaUC09G160370 vs. TAIR 10
Match: AT1G15350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 162.5 bits (410), Expect = 2.9e-40 Identity = 89/161 (55.28%), Postives = 106/161 (65.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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