CaUC09G160120 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G160120
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	(6-4)DNA photolyase
Location	Ciama_Chr09: 2408236 .. 2411317 (+)
RNA-Seq Expression	CaUC09G160120
Synteny	CaUC09G160120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCTAATCCCACTGCGTTTTCACCGGGATCGTCTAGGGCTGGACTTCTTCTTCAGAGTCTTGTGGACGATTTGAACCTCAAGAAGCTCGGCTCGTGCTTGTTGCTTCTCCACGGGGAGCCTGGCGAGGTCTTCATTCCCTGCTTGGAAGAGGTATCTATAAGTAACCTCTTACTTCGCCTTAAAGGATATTGCTATAGTAGCTGTTAATTCAACTTCCGCTTACGGTTATTAACTTATCATCTGTGGTCTTGTTCGCTTATTTCTAGTGGAATGTCCACAAGTTCTGCTTTGAGTATGATACAGAACCCTCCTTACTATCAAGTTTAAAGTTAGGCGATTCTTTTGTCAATATTGAGTTAAGAGATGCAAGAGTGACCAGGTACTCGTAGTTCTGGGCAGAGCGAAAGAAGGAAGAAATTTCTACTGCTTAGTTCGTCGCAAATCTGAAAAAGTGTCTATGAAATACTTAAGATCTTATGGTTTTTTCCTCCAATTTTTTCTCATAGAACCTTGAGAATTGAGATCATATTTTCAAGAAATTAGAGTGTTAATTTCCACTATACTAGAAAAATTAGAATGCCAACTTTAGCAGCTTGCTAAAACAATTTCTGGTTATGTTCTGCTTGTATTCTCAGAAAAGGAAATGGAAATTTAGGGCCGTTTGATAACGTTTTTGTTTTTTGTTTCCCGTTTTTTGTTTTTTGTTTTTTGTTTTTTGTTTCTTATTTATTATTTCTTATTTATTATTTCTTGTTTATTGTTTCTTGTTTCTTAAGAACTAAAAACATGAATATGTTTGACATATAAATATAGCAATTTTTTAAAAAATAAAATTTACAAAGAAAACAAATAAATAAATATGAAAGAAATATAAAAACAAACAAAATAAACTTACCTCGAAATCAAACTAGTGATCTGCAAGCAGCAGGATTTGCTTGGCGTGCTGACCTACCAATGGAGCAAAGTTACTTCTTGGTTCATAAAGTGAAATAGTATTTAGAAATAAGAAACAGGAACAGTTACCAAACAAGTATGTTTCTTGAAAAATGAGAAACAATAACAGGAAGCAGAAAACGGGAATGTCATCAAACGGCCTCTTATTGGTCACTTTTGTGTCCATCTGTTTTCTCACAGAACCATGCATCTGCAGTTGGGATTGAAGTCTTCTCTCCTATGAGCCATACTCTATTTTAACCGGCAGACATTAGTCAAAAGGTTGTTTTAAAAGGTCTCTATTATATTGGGACATAAACACTGTTCTAGTGTGGAATTTATTGCTTAATCAGTTGGTATGTTTCCATTTTTCTCATGACGGTTAATTTGGAATGAGAATTAGTTTTGTGCATGATTAATGGGCTCCTTTTAGAGGAGATAAAACGGAAGTCTTGAAGAGGCTGGAATAGTCATTGAGTAACAAGGTACAGATTCTTTTTCTAGAATTCTTTCAGGTTCTAAGCTTCTATCTCCGAGGATCCATCTTTTTTCTCATCTTTCATCATGATCGATTTTGTGTTCTATGTTGCCGGTATGAAAATCAACTTTTGATGCAGATATGCCCAAGCAGTACACATATATGAGCCATGGACAGCTCCTCTCAGCATGCAAAAGAAAGCAAAGGGCATCACTGGTAAACAATACCCAAAGCCAGGTTAGTTCTGCTGACGGTTATTTAGGTTAATTATTATTTATGCCTCCTGACCAGAAGCTTTATATATTATACCTTTTAAGAGAAAATGGCTAACAATATTTGGAAGGGGGAAAAATTGTAACTGGGTGTGGCCATTGGTAGTTGTTAGAACATCTCCTTAAATCATCCAAAATGAAATCATTAGTTGTCTATTCCTCTACTCTGGTTACTATATCAACTGTTTCCATCTACTCTCAGGACATTTTCTCTTCATTTCCTTGTATTTAGTTGATCTTATAATACCTATAATGACAAACCTATTAAACCCTGCAAGCAAGTTGACTTTTGACAACTTCTTGCAAGATCACACTTCTCAAAACAATCTTTTATCAAATTGGTCTTGTCAAGAGATGTATGTAGTCTTATATGAATGAGTTCGGAGAGGCATAAAGTAAGTATGGAAGTTGGGTTCTCAAGAAAGCGAGTGAAACATTTGTCGAAGCTGTTCATGAGAGCATTTCCTTTTCTTATCTTTTAGGAGACAGATAAAATGAGAAATTTTTATAACTGTAAGGATACTCCCTTACTATGTGATATTAAACTTGATAATGAGTAAATACAGGGGATTTGCTTAACAAAACAACAAGAACAAGAACAAAGATAAACCTTCAGCCAAACACAGGAGACTCTCCCTTCCCAGAACTATTGTTCAATACACAAAATTCAAGATAACTAACCCTAGCGAAATAAAACACTTAAATACTGACATTCCCCTGTTGCACGATCTTCTGGGACCACAGCCAGCTATTTGCTTGTCTAGGGTGCAATTCCTTTCCTATCCTTTCTCATATATACCTGCTTAATTGGAGGCTTAGCAATAACACAGTTCAAATTTTGCTGTATCCTCCTGGAAGTAAGGATTCAATTGCTATTATTTGATCTCATCAACTCAATTACTCAGGTCTACCATCTTTCTTTTTCAGTGGTATCCCATGATATAGCTACTGAAGAACGTAGGAGTTAAGTGGCTGAAGCATACGGACTAAACAAAAGAATGAATGATTTGATAAGCAAATAAGATTTGGAGAACTTGAAATGAAGTTCAGAAGAGGAACAGAGCCAAAGGTTCAAAGGAAACAGAAAAGACAAACACTCATTAACTCGGTTCGGCTGCCCTAGTGTTTCTTTTCTGCTAACTCCCTGTTGCAGGAAGCTACAGGTGTTTAGATGTTAAAGATCCAGCTCCATCTACTTCAATTCTTCAACTCCCAGGTTGCGGGAAGTTGCACGAATACACCATTCAATTAAGCCATCTGATCTCTTTGATAGTTCGTAGGCATTATTTATGCAAGCCCTGTTGTTGAACTCTCGAAACTGGTTGATGTTTCTCAGAATTCAGTTCCAAAATGCACTTGTCTAACTCTTCTTTCTGCTGCAACTAGCCAATAG

mRNA sequence

ATGGAGCCTAATCCCACTGCGTTTTCACCGGGATCGTCTAGGGCTGGACTTCTTCTTCAGAGTCTTGTGGACGATTTGAACCTCAAGAAGCTCGGCTCGTGCTTGTTGCTTCTCCACGGGGAGCCTGGCGAGGTCTTCATTCCCTGCTTGGAAGAGTGGAATGTCCACAAGTTCTGCTTTGAGTATGATACAGAACCCTCCTTACTATCAAGTTTAAAGTTAGGCGATTCTTTTGTCAATATTGAGTTAAGAGATGCAAGAGTGACCAGATATGCCCAAGCAGTACACATATATGAGCCATGGACAGCTCCTCTCAGCATGCAAAAGAAAGCAAAGGGCATCACTGGTAAACAATACCCAAAGCCAGTGGTATCCCATGATATAGCTACTGAAGAACGAAGCTACAGGTGTTTAGATGTTAAAGATCCAGCTCCATCTACTTCAATTCTTCAACTCCCAGGCATTATTTATGCAAGCCCTGTTGTTGAACTCTCGAAACTGGTTGATGTTTCTCAGAATTCAGTTCCAAAATGCACTTGTCTAACTCTTCTTTCTGCTGCAACTAGCCAATAG

Coding sequence (CDS)

ATGGAGCCTAATCCCACTGCGTTTTCACCGGGATCGTCTAGGGCTGGACTTCTTCTTCAGAGTCTTGTGGACGATTTGAACCTCAAGAAGCTCGGCTCGTGCTTGTTGCTTCTCCACGGGGAGCCTGGCGAGGTCTTCATTCCCTGCTTGGAAGAGTGGAATGTCCACAAGTTCTGCTTTGAGTATGATACAGAACCCTCCTTACTATCAAGTTTAAAGTTAGGCGATTCTTTTGTCAATATTGAGTTAAGAGATGCAAGAGTGACCAGATATGCCCAAGCAGTACACATATATGAGCCATGGACAGCTCCTCTCAGCATGCAAAAGAAAGCAAAGGGCATCACTGGTAAACAATACCCAAAGCCAGTGGTATCCCATGATATAGCTACTGAAGAACGAAGCTACAGGTGTTTAGATGTTAAAGATCCAGCTCCATCTACTTCAATTCTTCAACTCCCAGGCATTATTTATGCAAGCCCTGTTGTTGAACTCTCGAAACTGGTTGATGTTTCTCAGAATTCAGTTCCAAAATGCACTTGTCTAACTCTTCTTTCTGCTGCAACTAGCCAATAG

Protein sequence

MEPNPTAFSPGSSRAGLLLQSLVDDLNLKKLGSCLLLLHGEPGEVFIPCLEEWNVHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQAVHIYEPWTAPLSMQKKAKGITGKQYPKPVVSHDIATEERSYRCLDVKDPAPSTSILQLPGIIYASPVVELSKLVDVSQNSVPKCTCLTLLSAATSQ

Homology

[Close]

BLAST of CaUC09G160120 vs. NCBI nr
Match: TYK10573.1 ((6-4)DNA photolyase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 112.8 bits (281), Expect = 3.2e-21
Identity = 74/163 (45.40%), Postives = 89/163 (54.60%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEPGEV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEPWTAPLSMQKKAK 120
           V K CFEYDT+P               +  DARV   A A  + ++ P +  L       
Sbjct: 122 VKKLCFEYDTDP-------------YYQALDARVQNLASAAGIEVFSPVSHTLFNPADII 181

Query: 121 GITGKQYPKPVVSHDIATEERSYRCLDVKDPAPSTSILQLPGI 156
              G   P    S      E S+ C  +     ST++  LP +
Sbjct: 182 QKNGGSPPLSYQSFLKLAGEPSWACAPL-----STTVSSLPPV 206

[Close]

BLAST of CaUC09G160120 vs. NCBI nr
Match: TYK10573.1 ((6-4)DNA photolyase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 5.8e-07
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 96  HIYEPWTAPLSMQKKAKGITGKQYPKPVVSHDIATEE 133
           +IYEPWTAPLS+QKKAK I G+ YPKPVVSHDIA +E
Sbjct: 470 YIYEPWTAPLSIQKKAKCIIGEDYPKPVVSHDIAIKE 506

HSP 2 Score: 112.8 bits (281), Expect = 3.2e-21
Identity = 74/163 (45.40%), Postives = 89/163 (54.60%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEPGEV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEPWTAPLSMQKKAK 120
           V K CFEYDT+P               +  DARV   A A  + ++ P +  L       
Sbjct: 122 VKKLCFEYDTDP-------------YYQALDARVQNLASAAGIEVFSPVSHTLFNPADII 181

Query: 121 GITGKQYPKPVVSHDIATEERSYRCLDVKDPAPSTSILQLPGI 156
              G   P    S      E S+ C  +     ST++  LP +
Sbjct: 182 QKNGGSPPLSYQSFLKLAGEPSWACAPL-----STTVSSLPPV 206

[Close]

BLAST of CaUC09G160120 vs. NCBI nr
Match: XP_008461072.1 (PREDICTED: (6-4)DNA photolyase isoform X1 [Cucumis melo])

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-06
Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 96  HIYEPWTAPLSMQKKAKGITGKQYPKPVVSHDIATEE 133
           +IYEPWTAPLS+QKKAK I G+ YPKPV+SHDIA +E
Sbjct: 470 YIYEPWTAPLSIQKKAKCIIGEDYPKPVLSHDIAIKE 506

HSP 2 Score: 112.1 bits (279), Expect = 5.4e-21
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEPGEV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLILHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEP 67
           V+K CFEYDT+P
Sbjct: 122 VNKLCFEYDTDP 133

[Close]

BLAST of CaUC09G160120 vs. NCBI nr
Match: XP_038896172.1 ((6-4)DNA photolyase [Benincasa hispida])

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-07
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 96  HIYEPWTAPLSMQKKAKGITGKQYPKPVVSHDIATEE 133
           +IYEPWTAPLS+QKKAK I GK YPKPVVSHDIA +E
Sbjct: 470 YIYEPWTAPLSIQKKAKCIIGKDYPKPVVSHDIAIKE 506

HSP 2 Score: 111.7 bits (278), Expect = 7.0e-21
Identity = 62/108 (57.41%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           M+PNP+AFSPGSSRAGL     LL+SLVD D+NLKKLGS LL+LHGEPGEV I CLEEWN
Sbjct: 62  MKPNPSAFSPGSSRAGLNRIQFLLESLVDLDMNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEP 101
           V K CFEYDT+P               +  D+RV  +A A  V ++ P
Sbjct: 122 VKKLCFEYDTDP-------------YYQALDSRVQNHASAAGVEVFSP 156

[Close]

BLAST of CaUC09G160120 vs. NCBI nr
Match: XP_022959592.1 ((6-4)DNA photolyase [Cucurbita moschata] >KAG7025764.1 (6-4)DNA photolyase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-07
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 0


Query: 96  HIYEPWTAPLSMQKKAKGITGKQYPKPVVSHDIATEE 133
           +IYEPWTAPLS+QKKAK I GK YP+PVVSHDIAT++
Sbjct: 470 YIYEPWTAPLSIQKKAKCIIGKDYPEPVVSHDIATKD 506

HSP 2 Score: 110.9 bits (276), Expect = 1.2e-20
Identity = 56/72 (77.78%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEPGEV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEP 67
           V K CFEYDT+P
Sbjct: 122 VKKLCFEYDTDP 133

[Close]

BLAST of CaUC09G160120 vs. ExPASy Swiss-Prot
Match: O48652 ((6-4)DNA photolyase OS=Arabidopsis thaliana OX=3702 GN=UVR3 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-17
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           ME +P+AFSPGSSRAG+     LL+SL D D +LKKLGS LL+  GEPGEV + CL+EW 
Sbjct: 63  MESDPSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWK 122

Query: 61  VHKFCFEYDTEP 67
           V + CFEYDT+P
Sbjct: 123 VKRLCFEYDTDP 134

HSP 2 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0


Query: 96  HIYEPWTAPLSMQKKAKGITGKQYPKPVVSHDIATEE 133
           +IYEPWTAPLS+Q KA  I GK YPKP+V HD A++E
Sbjct: 471 YIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSASKE 507

[Close]

BLAST of CaUC09G160120 vs. ExPASy Swiss-Prot
Match: Q0E2Y1 ((6-4)DNA photolyase OS=Oryza sativa subsp. japonica OX=39947 GN=UVR3 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-08
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0


Query: 96  HIYEPWTAPLSMQKKAKGITGKQYPKPVVSHDIATEE 133
           +IYEPWTAPLS+QKKA  I GK YPKPVV H IA++E
Sbjct: 463 YIYEPWTAPLSIQKKANCIIGKDYPKPVVDHAIASKE 499

[Close]

BLAST of CaUC09G160120 vs. ExPASy Swiss-Prot
Match: Q70AD6 (Cryptochrome-1 OS=Spalax judaei OX=134510 GN=CRY1 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.7e-07
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 11  GSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWNVHKFCFEYDT 67
           GSS  G+     LLQ L D D NL+KL S LL++ G+P +VF    +EWN+ K   EYD+
Sbjct: 43  GSSNVGINRWRFLLQCLEDLDANLRKLNSRLLVIRGQPADVFPRLFKEWNITKLSIEYDS 102

HSP 2 Score: 45.1 bits (105), Expect = 1.1e-03
Identity = 20/39 (51.28%), Postives = 26/39 (66.67%), Query Frame = 0


Query: 88  VTRYAQAVHIYEPWTAPLSMQKKAKGITGKQYPKPVVSH 127
           V R   A +IY+PW AP  +QK AK + G  YPKP+V+H
Sbjct: 435 VLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNH 473

[Close]

BLAST of CaUC09G160120 vs. ExPASy Swiss-Prot
Match: Q5IZC5 (Cryptochrome-1 OS=Erithacus rubecula OX=37610 GN=CRY1 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 7.8e-07
Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 11  GSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWNVHKFCFEYDT 67
           GSS  G+     LLQ L D D NL+KL S L ++ G+P +VF    +EWN+ K   EYD+
Sbjct: 43  GSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNIAKLSIEYDS 102

HSP 2 Score: 47.8 bits (112), Expect = 1.6e-04
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 0


Query: 88  VTRYAQAVHIYEPWTAPLSMQKKAKGITGKQYPKPVVSH 127
           V R   A +IY+PW AP S+QK AK I G  YPKP+V+H
Sbjct: 435 VLRGFPAKYIYDPWNAPESIQKAAKCIIGVNYPKPMVNH 473

[Close]

BLAST of CaUC09G160120 vs. ExPASy Swiss-Prot
Match: Q16526 (Cryptochrome-1 OS=Homo sapiens OX=9606 GN=CRY1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.8e-07
Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 11  GSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWNVHKFCFEYDT 67
           GSS  G+     LLQ L D D NL+KL S L ++ G+P +VF    +EWN+ K   EYD+
Sbjct: 43  GSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDS 102

HSP 2 Score: 45.1 bits (105), Expect = 1.1e-03
Identity = 20/39 (51.28%), Postives = 26/39 (66.67%), Query Frame = 0


Query: 88  VTRYAQAVHIYEPWTAPLSMQKKAKGITGKQYPKPVVSH 127
           V R   A +IY+PW AP  +QK AK + G  YPKP+V+H
Sbjct: 435 VLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNH 473

[Close]

BLAST of CaUC09G160120 vs. ExPASy TrEMBL
Match: A0A5D3CFB1 ((6-4)DNA photolyase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002270 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 74/163 (45.40%), Postives = 89/163 (54.60%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEPGEV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEPWTAPLSMQKKAK 120
           V K CFEYDT+P               +  DARV   A A  + ++ P +  L       
Sbjct: 122 VKKLCFEYDTDP-------------YYQALDARVQNLASAAGIEVFSPVSHTLFNPADII 181

Query: 121 GITGKQYPKPVVSHDIATEERSYRCLDVKDPAPSTSILQLPGI 156
              G   P    S      E S+ C  +     ST++  LP +
Sbjct: 182 QKNGGSPPLSYQSFLKLAGEPSWACAPL-----STTVSSLPPV 206

[Close]

BLAST of CaUC09G160120 vs. ExPASy TrEMBL
Match: A0A5D3CFB1 ((6-4)DNA photolyase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002270 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.8e-07
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 96  HIYEPWTAPLSMQKKAKGITGKQYPKPVVSHDIATEE 133
           +IYEPWTAPLS+QKKAK I G+ YPKPVVSHDIA +E
Sbjct: 470 YIYEPWTAPLSIQKKAKCIIGEDYPKPVVSHDIAIKE 506

HSP 2 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 74/163 (45.40%), Postives = 89/163 (54.60%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEPGEV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEPWTAPLSMQKKAK 120
           V K CFEYDT+P               +  DARV   A A  + ++ P +  L       
Sbjct: 122 VKKLCFEYDTDP-------------YYQALDARVQNLASAAGIEVFSPVSHTLFNPADII 181

Query: 121 GITGKQYPKPVVSHDIATEERSYRCLDVKDPAPSTSILQLPGI 156
              G   P    S      E S+ C  +     ST++  LP +
Sbjct: 182 QKNGGSPPLSYQSFLKLAGEPSWACAPL-----STTVSSLPPV 206

[Close]

BLAST of CaUC09G160120 vs. ExPASy TrEMBL
Match: A0A1S3CDW6 ((6-4)DNA photolyase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499773 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.2e-07
Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 96  HIYEPWTAPLSMQKKAKGITGKQYPKPVVSHDIATEE 133
           +IYEPWTAPLS+QKKAK I G+ YPKPV+SHDIA +E
Sbjct: 470 YIYEPWTAPLSIQKKAKCIIGEDYPKPVLSHDIAIKE 506

HSP 2 Score: 111.7 bits (278), Expect = 3.4e-21
Identity = 62/108 (57.41%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           M+PNP+AFSPGSSRAGL     LL+SLVD D+NLKKLGS LL+LHGEPGEV I CLEEWN
Sbjct: 62  MKPNPSAFSPGSSRAGLNRIQFLLESLVDLDMNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEP 101
           V K CFEYDT+P               +  D+RV  +A A  V ++ P
Sbjct: 122 VKKLCFEYDTDP-------------YYQALDSRVQNHASAAGVEVFSP 156

[Close]

BLAST of CaUC09G160120 vs. ExPASy TrEMBL
Match: A0A6J1H4Z1 ((6-4)DNA photolyase OS=Cucurbita moschata OX=3662 GN=LOC111460621 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-07
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 0


Query: 96  HIYEPWTAPLSMQKKAKGITGKQYPKPVVSHDIATEE 133
           +IYEPWTAPLS+QKKAK I GK YP+PVVSHDIAT++
Sbjct: 470 YIYEPWTAPLSIQKKAKCIIGKDYPEPVVSHDIATKD 506

HSP 2 Score: 110.9 bits (276), Expect = 5.8e-21
Identity = 56/72 (77.78%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           MEP+P+AFSPGSSRAGL     LL+SLVD DLNLKKLGS LL+LHGEPGEV I CLEEWN
Sbjct: 62  MEPDPSAFSPGSSRAGLNRIRFLLESLVDLDLNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEP 67
           V K CFEYDT+P
Sbjct: 122 VKKLCFEYDTDP 133

[Close]

BLAST of CaUC09G160120 vs. ExPASy TrEMBL
Match: A0A6J1KRI5 ((6-4)DNA photolyase OS=Cucurbita maxima OX=3661 GN=LOC111498021 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-20
Identity = 61/108 (56.48%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           M+P+P+AFSPGSSRAGL     LL+SLVD D+NLKKLGS LL+LHGEPGEV I CLEEWN
Sbjct: 62  MKPDPSAFSPGSSRAGLNRIQFLLESLVDLDMNLKKLGSRLLVLHGEPGEVLIRCLEEWN 121

Query: 61  VHKFCFEYDTEPSLLSSLKLGDSFVNIELRDARVTRYAQA--VHIYEP 101
           V K CFEYDT+P               +  D+RV  +A A  V ++ P
Sbjct: 122 VKKLCFEYDTDP-------------YYQALDSRVQNHASAAGVEVFSP 156

[Close]

BLAST of CaUC09G160120 vs. TAIR 10
Match: AT3G15620.1 (DNA photolyase family protein )

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-18
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           ME +P+AFSPGSSRAG+     LL+SL D D +LKKLGS LL+  GEPGEV + CL+EW 
Sbjct: 63  MESDPSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWK 122

Query: 61  VHKFCFEYDTEP 67
           V + CFEYDT+P
Sbjct: 123 VKRLCFEYDTDP 134

HSP 2 Score: 58.2 bits (139), Expect = 8.6e-09
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0


Query: 96  HIYEPWTAPLSMQKKAKGITGKQYPKPVVSHDIATEE 133
           +IYEPWTAPLS+Q KA  I GK YPKP+V HD A++E
Sbjct: 471 YIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSASKE 507

[Close]

BLAST of CaUC09G160120 vs. TAIR 10
Match: AT3G15620.2 (DNA photolyase family protein )

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-18
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 0


Query: 1   MEPNPTAFSPGSSRAGL-----LLQSLVD-DLNLKKLGSCLLLLHGEPGEVFIPCLEEWN 60
           ME +P+AFSPGSSRAG+     LL+SL D D +LKKLGS LL+  GEPGEV + CL+EW 
Sbjct: 63  MESDPSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWK 122

Query: 61  VHKFCFEYDTEP 67
           V + CFEYDT+P
Sbjct: 123 VKRLCFEYDTDP 134

The following BLAST results are available for this feature:

BLAST of CaUC09G160120 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10573.1	3.2e-21	45.40	(6-4)DNA photolyase isoform X1 [Cucumis melo var. makuwa]	[more]
TYK10573.1	5.8e-07	78.38	(6-4)DNA photolyase isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008461072.1	1.3e-06	75.68	PREDICTED: (6-4)DNA photolyase isoform X1 [Cucumis melo]	[more]
XP_038896172.1	2.0e-07	81.08	(6-4)DNA photolyase [Benincasa hispida]	[more]
XP_022959592.1	2.6e-07	78.38	(6-4)DNA photolyase [Cucurbita moschata] >KAG7025764.1 (6-4)DNA photolyase, part...	[more]

BLAST of CaUC09G160120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48652	2.9e-17	62.50	(6-4)DNA photolyase OS=Arabidopsis thaliana OX=3702 GN=UVR3 PE=1 SV=2	[more]
Q0E2Y1	1.4e-08	72.97	(6-4)DNA photolyase OS=Oryza sativa subsp. japonica OX=39947 GN=UVR3 PE=3 SV=1	[more]
Q70AD6	2.7e-07	48.39	Cryptochrome-1 OS=Spalax judaei OX=134510 GN=CRY1 PE=2 SV=1	[more]
Q5IZC5	7.8e-07	46.77	Cryptochrome-1 OS=Erithacus rubecula OX=37610 GN=CRY1 PE=2 SV=2	[more]
Q16526	7.8e-07	46.77	Cryptochrome-1 OS=Homo sapiens OX=9606 GN=CRY1 PE=1 SV=1	[more]

BLAST of CaUC09G160120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFB1	1.5e-21	45.40	(6-4)DNA photolyase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3CFB1	2.8e-07	78.38	(6-4)DNA photolyase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CDW6	6.2e-07	75.68	(6-4)DNA photolyase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499773 PE=3 SV=1	[more]
A0A6J1H4Z1	1.3e-07	78.38	(6-4)DNA photolyase OS=Cucurbita moschata OX=3662 GN=LOC111460621 PE=3 SV=1	[more]
A0A6J1KRI5	1.3e-20	56.48	(6-4)DNA photolyase OS=Cucurbita maxima OX=3661 GN=LOC111498021 PE=3 SV=1	[more]

Pages

BLAST of CaUC09G160120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15620.1	2.0e-18	62.50	DNA photolyase family protein	[more]
AT3G15620.2	2.0e-18	62.50	DNA photolyase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005101	Cryptochrome/DNA photolyase, FAD-binding domain	PFAM	PF03441	FAD_binding_7	coord: 93..132 e-value: 6.9E-5 score: 22.4
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 1..73 e-value: 6.8E-7 score: 31.3
None	No IPR available	GENE3D	1.10.579.10	DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3	coord: 84..150 e-value: 3.0E-8 score: 35.1
None	No IPR available	PANTHER	PTHR11455:SF52	CRYPTOCHROME CIRCADIAN REGULATOR 5	coord: 14..67
None	No IPR available	PANTHER	PTHR11455:SF52	CRYPTOCHROME CIRCADIAN REGULATOR 5	coord: 93..132
IPR002081	Cryptochrome/DNA photolyase class 1	PANTHER	PTHR11455	CRYPTOCHROME	coord: 93..132 coord: 14..67
IPR036134	Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily	SUPERFAMILY	48173	Cryptochrome/photolyase FAD-binding domain	coord: 95..134
IPR036155	Cryptochrome/photolyase, N-terminal domain superfamily	SUPERFAMILY	52425	Cryptochrome/photolyase, N-terminal domain	coord: 9..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G160120.1	CaUC09G160120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032922	circadian regulation of gene expression
biological_process	GO:0043153	entrainment of circadian clock by photoperiod
biological_process	GO:0009411	response to UV
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003914	DNA (6-4) photolyase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0071949	FAD binding