CaUC08G157430 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G157430
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Plant protein 1589 of unknown function
Location	Ciama_Chr08: 28662302 .. 28663572 (-)
RNA-Seq Expression	CaUC08G157430
Synteny	CaUC08G157430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGTAAATGAGTGCACAAATCAGCCCCATTGTTCAAAGATCCGCTCCATTTCATATGTATGTTAAATTTGGAGACAACGTGGCTTTATGAGTATACACTAAAAACTTATCCATCACAAGGCTCACAATTCAATCACCCAACAGCACCGCATATGATTATGTTGACTGCTTTCCAATCTGTATGTTACTCTTTCAATATTATTGTGGCCATTTATTTATTTGATGGCAGCTCTTAAATAATAAATAATAAATATTGGGATGATCTACAACCTCACTTCCTTTTTTGTCCCCCTTTCAATTTCACCTATATCTATCAACCATCAGTCTATAGTTGTAATTTGAATGGCACTGGGAAAACAGTAGATTATGAATAATGAGTTATTGGCAGTGACAGGAATTTAAAGAGGTTGTTCATTGTTGGGGCCAAAGGGGAAGAGAGATTAGATTTGTCAAAATCAGTCACCATTATATTGCAATAACCATCCATTCCATACTGCAACTCCATCCTTCTTATCTGCTTGGAGATGGGTTTGGATTTCTTGTGCTCTTTTGGCCCTTCACTCAGATATCTGTGGATAATATTTCTTCCTTTTTAGCTATAAAAAGCTCACAAATATCTTCTCCTGTTTGGCGCTTATGAGGGTTTTTAATTTGTTCTCTTCTCCTATTCTCTGTTGATTGGTTTGGTTTTTTTTTTCGCTGAATGTACTTGTTTTTGTCCAATTTCTAAGCTAATTTATAAACAGATATACATATATAAATATATACTATGTACAGCCACCCGTTTCTTCCTTGTTTTTATTGCCATCCCCATGCCTATATCCGGATGGTACTGCTGCTAACGTAACTGCTTCTCTCTCTTTCACTCATCTTGTCGTAGTTGCGGTTAAGACTCTTTGCATTATTATTTTGCAGGTCCAACATCTGATAGAGAGATGCTTGCTGTTTCATATGAGTCGAGATGAGTGCGTAAAGGCATTGGCTCACCATGCAAACATTCGCCCTCTCATAACACTTACAGGTCCATACAAACACTTCCTTAACTTTAATTCTTCTCTCTCTTTCTCTAGATCAAATTAATTATTCAATAATCTAATTAAGCTTTTATGGTTTTTTTTGACCTCCCAGTGTGGAAAGAGCTCCAGAAAGAGAACTCTGAATTCTTCCGGGCATATTTCCATACTATTTCTCCCAACCCATTCCTCGGTATCATCCCTTCTAATTTCACTAAAATAATTATTCAATCAATTCTTGGATGTTTATTCTAA

mRNA sequence

ATGGTTCCACCCGTTTCTTCCTTGTTTTTATTGCCATCCCCATGCCTATATCCGGATGGTACTGCTGCTAACGTCCAACATCTGATAGAGAGATGCTTGCTGTTTCATATGAGTCGAGATGAGTGCGTAAAGGCATTGGCTCACCATGCAAACATTCGCCCTCTCATAACACTTACAGTGTGGAAAGAGCTCCAGAAAGAGAACTCTGAATTCTTCCGGGCATATTTCCATACTATTTCTCCCAACCCATTCCTCGGTATCATCCCTTCTAATTTCACTAAAATAATTATTCAATCAATTCTTGGATGTTTATTCTAA

Coding sequence (CDS)

ATGGTTCCACCCGTTTCTTCCTTGTTTTTATTGCCATCCCCATGCCTATATCCGGATGGTACTGCTGCTAACGTCCAACATCTGATAGAGAGATGCTTGCTGTTTCATATGAGTCGAGATGAGTGCGTAAAGGCATTGGCTCACCATGCAAACATTCGCCCTCTCATAACACTTACAGTGTGGAAAGAGCTCCAGAAAGAGAACTCTGAATTCTTCCGGGCATATTTCCATACTATTTCTCCCAACCCATTCCTCGGTATCATCCCTTCTAATTTCACTAAAATAATTATTCAATCAATTCTTGGATGTTTATTCTAA

Protein sequence

MVPPVSSLFLLPSPCLYPDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVWKELQKENSEFFRAYFHTISPNPFLGIIPSNFTKIIIQSILGCLF

Homology

[Close]

BLAST of CaUC08G157430 vs. NCBI nr
Match: XP_038884418.1 (uncharacterized protein LOC120075271 isoform X1 [Benincasa hispida])

HSP 1 Score: 133.3 bits (334), Expect = 1.2e-27
Identity = 63/74 (85.14%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 14 PCL--YPDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVWKELQKENSEF 73
          PC   +P      VQHLIERCLL HMSRDECVKALAHHANIRPLITLTVWKELQKENSEF
Sbjct: 13 PCFHCHPHAYIRMVQHLIERCLLLHMSRDECVKALAHHANIRPLITLTVWKELQKENSEF 72

Query: 74 FRAYFHTISPNPFL 86
          FRAYFHTISPNPFL
Sbjct: 73 FRAYFHTISPNPFL 86

[Close]

BLAST of CaUC08G157430 vs. NCBI nr
Match: XP_038884419.1 (uncharacterized protein LOC120075271 isoform X2 [Benincasa hispida])

HSP 1 Score: 133.3 bits (334), Expect = 1.2e-27
Identity = 63/74 (85.14%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 14 PCL--YPDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVWKELQKENSEF 73
          PC   +P      VQHLIERCLL HMSRDECVKALAHHANIRPLITLTVWKELQKENSEF
Sbjct: 13 PCFHCHPHAYIRMVQHLIERCLLLHMSRDECVKALAHHANIRPLITLTVWKELQKENSEF 72

Query: 74 FRAYFHTISPNPFL 86
          FRAYFHTISPNPFL
Sbjct: 73 FRAYFHTISPNPFL 86

[Close]

BLAST of CaUC08G157430 vs. NCBI nr
Match: XP_008444348.1 (PREDICTED: uncharacterized protein LOC103487701 [Cucumis melo])

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-27
Identity = 64/90 (71.11%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 14  PCLY--PDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVWKELQKENSEF 73
           PC +  P      VQHLIERCLL HMSRDECVKALAHHANIRPLITLTVWKELQKENS+F
Sbjct: 11  PCFHCQPHAYIRMVQHLIERCLLLHMSRDECVKALAHHANIRPLITLTVWKELQKENSDF 70

Query: 74  FRAYFHTISPNPFLGIIPSNFTKIIIQSIL 102
           FRAYFHTISPNPFL     +   I+ +  L
Sbjct: 71  FRAYFHTISPNPFLAKFTGSERSIVRRQYL 100

[Close]

BLAST of CaUC08G157430 vs. NCBI nr
Match: XP_004143067.2 (uncharacterized protein LOC101211262 [Cucumis sativus] >KGN62299.1 hypothetical protein Csa_018552 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 3.1e-26
Identity = 66/87 (75.86%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 1  MVPPVSSLFLLPSPCLY--PDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITL 60
          M  P S  FL   PC +  P      VQHLIERCLL HMSRDECVKALA HANIRPLITL
Sbjct: 1  MYRPNSHHFL---PCFHCQPHAYIRMVQHLIERCLLLHMSRDECVKALADHANIRPLITL 60

Query: 61 TVWKELQKENSEFFRAYFHTISPNPFL 86
          TVWKELQKENS+FFRAYFHTISPNPFL
Sbjct: 61 TVWKELQKENSDFFRAYFHTISPNPFL 84

[Close]

BLAST of CaUC08G157430 vs. NCBI nr
Match: XP_022961647.1 (uncharacterized protein LOC111462356 isoform X1 [Cucurbita moschata])

HSP 1 Score: 128.6 bits (322), Expect = 3.1e-26
Identity = 65/89 (73.03%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 4  PVSSLFLLPSPCL--YPDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVW 63
          P S  FL   PC   +P      VQHLIERCLL HMSRDECVKALAHHANIRPLIT TVW
Sbjct: 3  PYSHQFL---PCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHTVW 62

Query: 64 KELQKENSEFFRAYFHTISPNPFLGIIPS 91
          KELQKEN EFFRAYF TIS +PFL +IPS
Sbjct: 63 KELQKENPEFFRAYFRTISRHPFLSMIPS 88

[Close]

BLAST of CaUC08G157430 vs. ExPASy TrEMBL
Match: A0A1S3BA39 (uncharacterized protein LOC103487701 OS=Cucumis melo OX=3656 GN=LOC103487701 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.0e-27
Identity = 64/90 (71.11%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 14  PCLY--PDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVWKELQKENSEF 73
           PC +  P      VQHLIERCLL HMSRDECVKALAHHANIRPLITLTVWKELQKENS+F
Sbjct: 11  PCFHCQPHAYIRMVQHLIERCLLLHMSRDECVKALAHHANIRPLITLTVWKELQKENSDF 70

Query: 74  FRAYFHTISPNPFLGIIPSNFTKIIIQSIL 102
           FRAYFHTISPNPFL     +   I+ +  L
Sbjct: 71  FRAYFHTISPNPFLAKFTGSERSIVRRQYL 100

[Close]

BLAST of CaUC08G157430 vs. ExPASy TrEMBL
Match: A0A0A0LMP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348860 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-26
Identity = 66/87 (75.86%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 1  MVPPVSSLFLLPSPCLY--PDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITL 60
          M  P S  FL   PC +  P      VQHLIERCLL HMSRDECVKALA HANIRPLITL
Sbjct: 1  MYRPNSHHFL---PCFHCQPHAYIRMVQHLIERCLLLHMSRDECVKALADHANIRPLITL 60

Query: 61 TVWKELQKENSEFFRAYFHTISPNPFL 86
          TVWKELQKENS+FFRAYFHTISPNPFL
Sbjct: 61 TVWKELQKENSDFFRAYFHTISPNPFL 84

[Close]

BLAST of CaUC08G157430 vs. ExPASy TrEMBL
Match: A0A6J1HAR0 (uncharacterized protein LOC111462356 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462356 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-26
Identity = 65/89 (73.03%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 4  PVSSLFLLPSPCL--YPDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVW 63
          P S  FL   PC   +P      VQHLIERCLL HMSRDECVKALAHHANIRPLIT TVW
Sbjct: 3  PYSHQFL---PCFHCHPQAYIRKVQHLIERCLLLHMSRDECVKALAHHANIRPLITHTVW 62

Query: 64 KELQKENSEFFRAYFHTISPNPFLGIIPS 91
          KELQKEN EFFRAYF TIS +PFL +IPS
Sbjct: 63 KELQKENPEFFRAYFRTISRHPFLSMIPS 88

[Close]

BLAST of CaUC08G157430 vs. ExPASy TrEMBL
Match: A0A6J1KA89 (uncharacterized protein LOC111492501 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492501 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.1e-25
Identity = 65/98 (66.33%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 4  PVSSLFLLPSPCL--YPDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVW 63
          P S  FL   PC   +P      VQHLIERCLL HMSRDECVKALAHHANIRPLIT TVW
Sbjct: 3  PYSHQFL---PCFHCHPQAYIRMVQHLIERCLLLHMSRDECVKALAHHANIRPLITHTVW 62

Query: 64 KELQKENSEFFRAYFHTISPNPFLGII-----PSNFTK 95
          KELQKEN EFFRAYF TIS +PFL +      P N++K
Sbjct: 63 KELQKENPEFFRAYFRTISRHPFLSMFLPFLPPKNYSK 97

[Close]

BLAST of CaUC08G157430 vs. ExPASy TrEMBL
Match: A0A6J1K802 (uncharacterized protein LOC111492501 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492501 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-24
Identity = 65/100 (65.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 4   PVSSLFLLPSPCL--YPDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVW 63
           P S  FL   PC   +P      VQHLIERCLL HMSRDECVKALAHHANIRPLIT TVW
Sbjct: 3   PYSHQFL---PCFHCHPQAYIRMVQHLIERCLLLHMSRDECVKALAHHANIRPLITHTVW 62

Query: 64  KELQKENSEFFRAYFHTISPNPFLGIIPSNFTKIIIQSIL 102
           KELQKEN EFFRAYF TIS +PFL    + FT+  +  I+
Sbjct: 63  KELQKENPEFFRAYFRTISRHPFL----TKFTRRSVSRIM 95

[Close]

BLAST of CaUC08G157430 vs. TAIR 10
Match: AT1G10657.2 (Plant protein 1589 of unknown function )

HSP 1 Score: 101.7 bits (252), Expect = 3.7e-22
Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 14 PCLY--PDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVWKELQKENSEF 73
          PCL+  P      VQH+IERC+L  M+RDECVKAL HHA+I PL+TLTVW+ LQ+EN +F
Sbjct: 14 PCLHCQPHSYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQRENKDF 73

Query: 74 FRAYFHTISPNPFL 86
          F  Y H +SP PFL
Sbjct: 74 FETYGHFVSPRPFL 87

[Close]

BLAST of CaUC08G157430 vs. TAIR 10
Match: AT1G10657.3 (Plant protein 1589 of unknown function )

HSP 1 Score: 101.7 bits (252), Expect = 3.7e-22
Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 14 PCLY--PDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVWKELQKENSEF 73
          PCL+  P      VQH+IERC+L  M+RDECVKAL HHA+I PL+TLTVW+ LQ+EN +F
Sbjct: 14 PCLHCQPHSYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQRENKDF 73

Query: 74 FRAYFHTISPNPFL 86
          F  Y H +SP PFL
Sbjct: 74 FETYGHFVSPRPFL 87

[Close]

BLAST of CaUC08G157430 vs. TAIR 10
Match: AT3G55240.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-18
Identity = 37/51 (72.55%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 25 VQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVWKELQKENSEFFRAY 76
          VQH+IE+CL+FHMS++ECV+AL+ HANI P+IT TVWKEL+KEN EFF+AY
Sbjct: 13 VQHMIEKCLIFHMSKEECVEALSKHANITPVITSTVWKELEKENKEFFKAY 63

[Close]

BLAST of CaUC08G157430 vs. TAIR 10
Match: AT1G10657.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 88.2 bits (217), Expect = 4.3e-18
Identity = 45/98 (45.92%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 14  PCLY--PDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLT------------ 73
           PCL+  P      VQH+IERC+L  M+RDECVKAL HHA+I PL+TLT            
Sbjct: 14  PCLHCQPHSYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVFSYILGFASVL 73

Query: 74  ------------VWKELQKENSEFFRAYFHTISPNPFL 86
                       VW+ LQ+EN +FF  Y H +SP PFL
Sbjct: 74  QKKLHDIFPPPAVWRGLQRENKDFFETYGHFVSPRPFL 111

[Close]

BLAST of CaUC08G157430 vs. TAIR 10
Match: AT1G10657.4 (Plant protein 1589 of unknown function )

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-17
Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 14 PCLY--PDGTAANVQHLIERCLLFHMSRDECVKALAHHANIRPLITLTVWKELQKENSEF 73
          PCL+  P      VQH+IERC+L  M+RDECVKAL HHA+I PL+TLTVW+ LQ+EN +F
Sbjct: 14 PCLHCQPHSYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQRENKDF 73

The following BLAST results are available for this feature:

BLAST of CaUC08G157430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884418.1	1.2e-27	85.14	uncharacterized protein LOC120075271 isoform X1 [Benincasa hispida]	[more]
XP_038884419.1	1.2e-27	85.14	uncharacterized protein LOC120075271 isoform X2 [Benincasa hispida]	[more]
XP_008444348.1	2.1e-27	71.11	PREDICTED: uncharacterized protein LOC103487701 [Cucumis melo]	[more]
XP_004143067.2	3.1e-26	75.86	uncharacterized protein LOC101211262 [Cucumis sativus] >KGN62299.1 hypothetical ...	[more]
XP_022961647.1	3.1e-26	73.03	uncharacterized protein LOC111462356 isoform X1 [Cucurbita moschata]	[more]

BLAST of CaUC08G157430 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC08G157430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BA39	1.0e-27	71.11	uncharacterized protein LOC103487701 OS=Cucumis melo OX=3656 GN=LOC103487701 PE=...	[more]
A0A0A0LMP2	1.5e-26	75.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348860 PE=4 SV=1	[more]
A0A6J1HAR0	1.5e-26	73.03	uncharacterized protein LOC111462356 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KA89	2.1e-25	66.33	uncharacterized protein LOC111492501 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1K802	1.4e-24	65.00	uncharacterized protein LOC111492501 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CaUC08G157430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10657.2	3.7e-22	60.81	Plant protein 1589 of unknown function	[more]
AT1G10657.3	3.7e-22	60.81	Plant protein 1589 of unknown function	[more]
AT3G55240.1	1.1e-18	72.55	Plant protein 1589 of unknown function	[more]
AT1G10657.1	4.3e-18	45.92	Plant protein 1589 of unknown function	[more]
AT1G10657.4	2.1e-17	62.30	Plant protein 1589 of unknown function	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006476	Conserved hypothetical protein CHP01589, plant	TIGRFAM	TIGR01589	TIGR01589	coord: 25..75 e-value: 3.9E-23 score: 79.2
IPR006476	Conserved hypothetical protein CHP01589, plant	PFAM	PF09713	A_thal_3526	coord: 25..75 e-value: 3.9E-26 score: 91.1
IPR006476	Conserved hypothetical protein CHP01589, plant	PANTHER	PTHR31871	OS02G0137100 PROTEIN	coord: 13..85
None	No IPR available	PANTHER	PTHR31871:SF25	SUBFAMILY NOT NAMED	coord: 13..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G157430.1	CaUC08G157430.1	mRNA