CaUC08G157420 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC08G157420
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionaxial regulator YABBY 4-like
LocationCiama_Chr08: 28656247 .. 28657465 (+)
RNA-Seq ExpressionCaUC08G157420
SyntenyCaUC08G157420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTTGATATGTCGACAGTGGAGCAGCTCCTGGCCGATTCCTCTGAACAGATTCGTTATGTGCAATGTGGTCTTTGTAGCACCATATTGTTGGTAAGATCACACGTATTTGTATAACACAACACACAAAACTAAAACAAGCTAATTAAATTAGTGATAATGCATAATTTGGTTTTATTTGGATGATGATTTCAAATTGTTGAATAATGAAGTAATATTAAGCACGCACAGGTAAATGTGCCCTACAGCAACTTGTCGATGGTGGTGAGCGTAAGATGTGGGAACTGCAGTGGCCTCCTCTCTGTCAACATGGCTAAGCCCTCTTTTATCCCTTTCGATCTTCTTACTTCCCTCTCACATAATTTGGTACCTAACGCTCCTAAATTTACTCTTTCTCTCGTCATCTATCTCTCTAAATTTAATTTTGAATTGGGTTTAAATTGTTATTATTATTATTATTATTATTATATATGTTTTTGTGACAGCCAAAGGAACCTTTCGCCCAAGAGTTTAACGTCGGCCAGAAACACTACTGCTTGGACAGCCTCAGCAACACATCCGACCTCATAACCTCCTACCATAACATTATTCACAATCATGAAGATGATGATGATGTCATCATTATTCCTCCCACTCCAGTTGTTAACAAGCGTAAGCCACCATCTGTATAATAAGTTAATTATTATGCCTTTAAATTCTTTTCTTATTATTGTACGTAACATTTGTTATTCTCTTTTAAATTAGCCCCGGAGAAGAAACAGCGAGCCCCATCAGCTTATAACCAATTCATCAAGTAAGATAAATATTTGCTATTAGTATTAACTGTGCACGTAAGAGATGAGAGGTGTTTAGAAAAGGGTTGGGAGGCTGAATTGGTTTCATGCAAATATTATATTATATTGCGCAGGGAAGAGATTCGGAGGCTGAAGGCGGAGAATCCAGCAATGGCTCATAAAGAGGCATTCAAGACAGCTGCAAAAAATGTAAGCTTTGTGTTGTTCCATAAATGATGAGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTAGAGAGTAGAGAGTAGAGAGTAGAGAGAATTACATTGTTAGCTTAAACATATATATTGTGGTTGAGGGTTTGCAGTGGGCTCATCTTCCTCCAGTCAATGCCGCAGCTGGAGTTGATCACATGACGATGAGAAAGAAAAACGTAATG

mRNA sequence

GTGTTGATATGTCGACAGTGGAGCAGCTCCTGGCCGATTCCTCTGAACAGATTCGTTATGTGCAATGTGGTCTTTGTAGCACCATATTGTTGGTAAGATCACACGTAAATGTGCCCTACAGCAACTTGTCGATGGTGGTGAGCGTAAGATGTGGGAACTGCAGTGGCCTCCTCTCTGTCAACATGGCTAAGCCCTCTTTTATCCCTTTCGATCTTCTTACTTCCCTCTCACATAATTTGGTACCTAACGCTCCTAAATTTACTCTTTCTCTCCCAAAGGAACCTTTCGCCCAAGAGTTTAACGTCGGCCAGAAACACTACTGCTTGGACAGCCTCAGCAACACATCCGACCTCATAACCTCCTACCATAACATTATTCACAATCATGAAGATGATGATGATGTCATCATTATTCCTCCCACTCCAGTTGTTAACAAGCCCCCGGAGAAGAAACAGCGAGCCCCATCAGCTTATAACCAATTCATCAAGGAAGAGATTCGGAGGCTGAAGGCGGAGAATCCAGCAATGGCTCATAAAGAGGCATTCAAGACAGCTGCAAAAAATTGGGCTCATCTTCCTCCAGTCAATGCCGCAGCTGGAGTTGATCACATGACGATGAGAAAGAAAAACGTAATG

Coding sequence (CDS)

ATGTCGACAGTGGAGCAGCTCCTGGCCGATTCCTCTGAACAGATTCGTTATGTGCAATGTGGTCTTTGTAGCACCATATTGTTGGTAAGATCACACGTAAATGTGCCCTACAGCAACTTGTCGATGGTGGTGAGCGTAAGATGTGGGAACTGCAGTGGCCTCCTCTCTGTCAACATGGCTAAGCCCTCTTTTATCCCTTTCGATCTTCTTACTTCCCTCTCACATAATTTGGTACCTAACGCTCCTAAATTTACTCTTTCTCTCCCAAAGGAACCTTTCGCCCAAGAGTTTAACGTCGGCCAGAAACACTACTGCTTGGACAGCCTCAGCAACACATCCGACCTCATAACCTCCTACCATAACATTATTCACAATCATGAAGATGATGATGATGTCATCATTATTCCTCCCACTCCAGTTGTTAACAAGCCCCCGGAGAAGAAACAGCGAGCCCCATCAGCTTATAACCAATTCATCAAGGAAGAGATTCGGAGGCTGAAGGCGGAGAATCCAGCAATGGCTCATAAAGAGGCATTCAAGACAGCTGCAAAAAATTGGGCTCATCTTCCTCCAGTCAATGCCGCAGCTGGAGTTGATCACATGACGATGAGAAAGAAAAACGTAATG

Protein sequence

MSTVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHEDDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAAAGVDHMTMRKKNVM
Homology
BLAST of CaUC08G157420 vs. NCBI nr
Match: KAA0061079.1 (axial regulator YABBY 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 333.2 bits (853), Expect = 1.6e-87
Identity = 182/212 (85.85%), Postives = 185/212 (87.26%), Query Frame = 0

Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMA 60
           MSTVEQLLADSSEQIRYVQCGLCSTILL    VNVPYSNLSMVVSVRCGNC+GLLSVNMA
Sbjct: 1   MSTVEQLLADSSEQIRYVQCGLCSTILL----VNVPYSNLSMVVSVRCGNCAGLLSVNMA 60

Query: 61  KPSFIPFDLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNT---SDLIT 120
           KPSFIPFDLLTSLSHN           LPKE F QEFNV QKHYCLDSLSNT   SDL+T
Sbjct: 61  KPSFIPFDLLTSLSHN-----------LPKEGFGQEFNV-QKHYCLDSLSNTSSSSDLLT 120

Query: 121 SYHNIIHNHEDDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE 180
           SYHNII NHE DDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE
Sbjct: 121 SYHNIIQNHE-DDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE 180

Query: 181 AFKTAAKNWAHLPPVNAAAGVDHMTMRKKNVM 210
           AFKTAAKNWAHLPPVN A G DHM +RKKNVM
Sbjct: 181 AFKTAAKNWAHLPPVN-AEGADHMMLRKKNVM 194

BLAST of CaUC08G157420 vs. NCBI nr
Match: KAE8652041.1 (hypothetical protein Csa_018647 [Cucumis sativus])

HSP 1 Score: 331.6 bits (849), Expect = 4.8e-87
Identity = 181/212 (85.38%), Postives = 185/212 (87.26%), Query Frame = 0

Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMA 60
           MSTVEQLLADSSEQIRYVQCGLCSTILL    VNVPYSNLSMVVSVRCGNC+GLLSVNMA
Sbjct: 159 MSTVEQLLADSSEQIRYVQCGLCSTILL----VNVPYSNLSMVVSVRCGNCAGLLSVNMA 218

Query: 61  KPSFIPFDLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSN---TSDLIT 120
           KPSFIPFDLLTSLSHN           LPKE F QEFNV QKHYCLDSLSN   +SDL+T
Sbjct: 219 KPSFIPFDLLTSLSHN-----------LPKEGFGQEFNV-QKHYCLDSLSNSSSSSDLLT 278

Query: 121 SYHNIIHNHEDDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE 180
           SYHNII NHE DDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE
Sbjct: 279 SYHNIIQNHE-DDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE 338

Query: 181 AFKTAAKNWAHLPPVNAAAGVDHMTMRKKNVM 210
           AFKTAAKNWAHLPPVN A G DHM +RKKNVM
Sbjct: 339 AFKTAAKNWAHLPPVN-AEGADHMMLRKKNVM 352

BLAST of CaUC08G157420 vs. NCBI nr
Match: XP_004143066.2 (axial regulator YABBY 4 [Cucumis sativus])

HSP 1 Score: 331.6 bits (849), Expect = 4.8e-87
Identity = 181/212 (85.38%), Postives = 185/212 (87.26%), Query Frame = 0

Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMA 60
           MSTVEQLLADSSEQIRYVQCGLCSTILL    VNVPYSNLSMVVSVRCGNC+GLLSVNMA
Sbjct: 1   MSTVEQLLADSSEQIRYVQCGLCSTILL----VNVPYSNLSMVVSVRCGNCAGLLSVNMA 60

Query: 61  KPSFIPFDLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSN---TSDLIT 120
           KPSFIPFDLLTSLSHN           LPKE F QEFNV QKHYCLDSLSN   +SDL+T
Sbjct: 61  KPSFIPFDLLTSLSHN-----------LPKEGFGQEFNV-QKHYCLDSLSNSSSSSDLLT 120

Query: 121 SYHNIIHNHEDDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE 180
           SYHNII NHE DDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE
Sbjct: 121 SYHNIIQNHE-DDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE 180

Query: 181 AFKTAAKNWAHLPPVNAAAGVDHMTMRKKNVM 210
           AFKTAAKNWAHLPPVN A G DHM +RKKNVM
Sbjct: 181 AFKTAAKNWAHLPPVN-AEGADHMMLRKKNVM 194

BLAST of CaUC08G157420 vs. NCBI nr
Match: XP_038886536.1 (axial regulator YABBY 4-like [Benincasa hispida])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 172/210 (81.90%), Postives = 178/210 (84.76%), Query Frame = 0

Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMA 60
           MSTVEQL  DSSEQIRYVQCGLCSTILL    VNVPYSNLSMVVSVRCGNC+GLLSVNMA
Sbjct: 1   MSTVEQLQGDSSEQIRYVQCGLCSTILL----VNVPYSNLSMVVSVRCGNCTGLLSVNMA 60

Query: 61  KPSFIPFDLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYH 120
           KP+FIPFDLLTSLSHN           LPKE   QEFN+ QKHYCLDSLSNTSDL+TSYH
Sbjct: 61  KPTFIPFDLLTSLSHN-----------LPKEGLGQEFNL-QKHYCLDSLSNTSDLVTSYH 120

Query: 121 NIIHNHEDDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFK 180
           NII NHEDDD  II P TPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFK
Sbjct: 121 NIIQNHEDDDVSIIPPTTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFK 180

Query: 181 TAAKNWAHLPPVNA-AAGVDHMTMRKKNVM 210
           TAAKNWAHLPPVNA   G  +M MRK+NVM
Sbjct: 181 TAAKNWAHLPPVNAQGQGAGYMMMRKRNVM 194

BLAST of CaUC08G157420 vs. NCBI nr
Match: XP_022997624.1 (axial regulator YABBY 4-like [Cucurbita maxima] >XP_023545650.1 axial regulator YABBY 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.5 bits (776), Expect = 1.4e-78
Identity = 165/206 (80.10%), Postives = 173/206 (83.98%), Query Frame = 0

Query: 2   STVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMAK 61
           ST+EQLL D SEQIRYVQCGLCSTILL    VNVPYSNLSMVVSVRCGNC+GLLSVNMAK
Sbjct: 3   STLEQLLPDPSEQIRYVQCGLCSTILL----VNVPYSNLSMVVSVRCGNCTGLLSVNMAK 62

Query: 62  PSFIPFDLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHN 121
           PSFIPFDLLTSLSHN           LPKEPF Q+ NV QKH CLD+L+NTSDL+TSYHN
Sbjct: 63  PSFIPFDLLTSLSHN-----------LPKEPF-QDLNV-QKHLCLDNLNNTSDLLTSYHN 122

Query: 122 IIHNHE-DDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFK 181
           II NHE DDDD IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFK
Sbjct: 123 IIQNHEDDDDDAIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFK 182

Query: 182 TAAKNWAHLPPVNAAAGVDHMTMRKK 207
           TAAKNWAHLPPVN     DH+   +K
Sbjct: 183 TAAKNWAHLPPVNGEG--DHVGSGRK 189

BLAST of CaUC08G157420 vs. ExPASy Swiss-Prot
Match: Q9LDT3 (Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 8.5e-39
Identity = 102/208 (49.04%), Postives = 131/208 (62.98%), Query Frame = 0

Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMA 60
           M+T    L D   QI +VQCG C+TILL    V+VP+++LSMVV+VRCG+C+ LLSVN+ 
Sbjct: 7   MTTTLNHLFDLPGQICHVQCGFCTTILL----VSVPFTSLSMVVTVRCGHCTSLLSVNLM 66

Query: 61  KPSFIPFDLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYH 120
           K SFIP  LL SLSH  +    K  ++       + + V Q     +  ++ + L++S  
Sbjct: 67  KASFIPLHLLASLSH--LDETGKEEVAATDGVEEEAWKVNQ-----EKENSPTTLVSSSD 126

Query: 121 NIIHNHEDDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFK 180
           N      +D+DV  +    VVNKPPEK+QRAPSAYN FIKEEIRRLKA+NP+MAHKEAF 
Sbjct: 127 N------EDEDVSRV--YQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFS 186

Query: 181 TAAKNWAHLPPV-NAAAGVDHMTMRKKN 208
            AAKNWAH PP  N  A  D     + N
Sbjct: 187 LAAKNWAHFPPAHNKRAASDQCFCEEDN 195

BLAST of CaUC08G157420 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.1e-29
Identity = 78/204 (38.24%), Postives = 117/204 (57.35%), Query Frame = 0

Query: 11  SSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLL 70
           S++Q+ YV C  C T+L     V+VP S+L   V+VRCG+CS LLSV ++  + +    +
Sbjct: 21  STDQLCYVHCSFCDTVLA----VSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALL-LPSV 80

Query: 71  TSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIH------ 130
           ++L H+ +P  P      P     +E   G ++  ++ +   S   +++H   H      
Sbjct: 81  SNLGHSFLPPPP----PPPPPNLLEEMRSGGQNINMNMM--MSHHASAHHPNEHLVMATR 140

Query: 131 NHEDDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAK 190
           N    D +  +P  P  N+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAK
Sbjct: 141 NGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAK 200

Query: 191 NWAHLPPVNAAAGVDHMTMRKKNV 209
           NWAH P ++     DH   +K NV
Sbjct: 201 NWAHFPHIHFGLMADHPPTKKANV 213

BLAST of CaUC08G157420 vs. ExPASy Swiss-Prot
Match: O22152 (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.8e-28
Identity = 79/200 (39.50%), Postives = 114/200 (57.00%), Query Frame = 0

Query: 12  SEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLLT 71
           S+ + YVQC  C TIL     VNVPY++L   V+VRCG C+ LLSVNM            
Sbjct: 22  SDHLCYVQCNFCQTILA----VNVPYTSLFKTVTVRCGCCTNLLSVNMRS---------- 81

Query: 72  SLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYH---NIIHNHED 131
                ++P + +  L L    +    ++ ++    D+ SN + ++ + H   N I +  D
Sbjct: 82  ----YVLPASNQLQLQLGPHSYFNPQDILEE--LRDAPSNMNMMMMNQHPTMNDIPSFMD 141

Query: 132 DDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAH 191
                 IP  P VN+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH
Sbjct: 142 LHQQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAH 201

Query: 192 LPPVNAAAGVDHMTMRKKNV 209
            P ++     D+  ++K N+
Sbjct: 202 FPHIHFGLVPDNQPVKKTNM 201

BLAST of CaUC08G157420 vs. ExPASy Swiss-Prot
Match: Q8L556 (Protein YABBY 3 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB3 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-25
Identity = 83/236 (35.17%), Postives = 119/236 (50.42%), Query Frame = 0

Query: 9   ADS-SEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPF 68
           ADS  EQ+ YV C  C T+L+    V+VP S+L   V+VRCG+CS LL+VNM +   +P 
Sbjct: 53  ADSEQEQLCYVHCHYCDTVLV----VSVPSSSLFETVTVRCGHCSSLLTVNM-RGLLLP- 112

Query: 69  DLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVG-----QKHYCLDSLS---NTSDLITSY 128
              T+ +    P  P      P   F    N+        H  LD +S   + + L+   
Sbjct: 113 --TTAAAAPPPPPPPPPPPPPPAAHFPHSLNLAPANPPHHHSLLDEISTANSPTQLLLEQ 172

Query: 129 HNI---------IHNHEDDDDVIIIPP-----------------TPVVNKPPEKKQRAPS 188
           H +           N+         PP                 T V+N+PPEK+QR PS
Sbjct: 173 HGLGGLMASAASCRNNNSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVPS 232

Query: 189 AYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAAAGVDHMTMRKKNVM 210
           AYN+FIK+EI+R+KA NP ++H+EAF  AAKNWAH P ++     DH  ++K +++
Sbjct: 233 AYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKKTSLL 280

BLAST of CaUC08G157420 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.6e-24
Identity = 75/190 (39.47%), Postives = 107/190 (56.32%), Query Frame = 0

Query: 11  SSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLL 70
           SSE++ YV C  C+TIL     V+VPY++L  +V+VRCG+C+ LLS+N+           
Sbjct: 6   SSERVCYVHCSFCTTILA----VSVPYASLFTLVTVRCGHCTNLLSLNIG---------- 65

Query: 71  TSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHED-D 130
            SL     P            P  Q+    ++H    SL    D  +S  +  +  E+ D
Sbjct: 66  VSLHQTSAP------------PIHQDLQPHRQH--TTSLVTRKDCASSSRSTNNLSENID 125

Query: 131 DDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHL 190
            +   +PP     +PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF TAAKNWAH 
Sbjct: 126 REAPRMPPI----RPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHF 163

Query: 191 PPVNAAAGVD 200
           P ++    +D
Sbjct: 186 PHIHFGLKLD 163

BLAST of CaUC08G157420 vs. ExPASy TrEMBL
Match: A0A5A7V5T8 (Axial regulator YABBY 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002190 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 7.9e-88
Identity = 182/212 (85.85%), Postives = 185/212 (87.26%), Query Frame = 0

Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMA 60
           MSTVEQLLADSSEQIRYVQCGLCSTILL    VNVPYSNLSMVVSVRCGNC+GLLSVNMA
Sbjct: 1   MSTVEQLLADSSEQIRYVQCGLCSTILL----VNVPYSNLSMVVSVRCGNCAGLLSVNMA 60

Query: 61  KPSFIPFDLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNT---SDLIT 120
           KPSFIPFDLLTSLSHN           LPKE F QEFNV QKHYCLDSLSNT   SDL+T
Sbjct: 61  KPSFIPFDLLTSLSHN-----------LPKEGFGQEFNV-QKHYCLDSLSNTSSSSDLLT 120

Query: 121 SYHNIIHNHEDDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE 180
           SYHNII NHE DDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE
Sbjct: 121 SYHNIIQNHE-DDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE 180

Query: 181 AFKTAAKNWAHLPPVNAAAGVDHMTMRKKNVM 210
           AFKTAAKNWAHLPPVN A G DHM +RKKNVM
Sbjct: 181 AFKTAAKNWAHLPPVN-AEGADHMMLRKKNVM 194

BLAST of CaUC08G157420 vs. ExPASy TrEMBL
Match: A0A0A0LK60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348870 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.3e-87
Identity = 181/212 (85.38%), Postives = 185/212 (87.26%), Query Frame = 0

Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMA 60
           MSTVEQLLADSSEQIRYVQCGLCSTILL    VNVPYSNLSMVVSVRCGNC+GLLSVNMA
Sbjct: 1   MSTVEQLLADSSEQIRYVQCGLCSTILL----VNVPYSNLSMVVSVRCGNCAGLLSVNMA 60

Query: 61  KPSFIPFDLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSN---TSDLIT 120
           KPSFIPFDLLTSLSHN           LPKE F QEFNV QKHYCLDSLSN   +SDL+T
Sbjct: 61  KPSFIPFDLLTSLSHN-----------LPKEGFGQEFNV-QKHYCLDSLSNSSSSSDLLT 120

Query: 121 SYHNIIHNHEDDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE 180
           SYHNII NHE DDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE
Sbjct: 121 SYHNIIQNHE-DDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKE 180

Query: 181 AFKTAAKNWAHLPPVNAAAGVDHMTMRKKNVM 210
           AFKTAAKNWAHLPPVN A G DHM +RKKNVM
Sbjct: 181 AFKTAAKNWAHLPPVN-AEGADHMMLRKKNVM 194

BLAST of CaUC08G157420 vs. ExPASy TrEMBL
Match: A0A6J1KC10 (axial regulator YABBY 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492500 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 6.7e-79
Identity = 165/206 (80.10%), Postives = 173/206 (83.98%), Query Frame = 0

Query: 2   STVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMAK 61
           ST+EQLL D SEQIRYVQCGLCSTILL    VNVPYSNLSMVVSVRCGNC+GLLSVNMAK
Sbjct: 3   STLEQLLPDPSEQIRYVQCGLCSTILL----VNVPYSNLSMVVSVRCGNCTGLLSVNMAK 62

Query: 62  PSFIPFDLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHN 121
           PSFIPFDLLTSLSHN           LPKEPF Q+ NV QKH CLD+L+NTSDL+TSYHN
Sbjct: 63  PSFIPFDLLTSLSHN-----------LPKEPF-QDLNV-QKHLCLDNLNNTSDLLTSYHN 122

Query: 122 IIHNHE-DDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFK 181
           II NHE DDDD IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFK
Sbjct: 123 IIQNHEDDDDDAIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFK 182

Query: 182 TAAKNWAHLPPVNAAAGVDHMTMRKK 207
           TAAKNWAHLPPVN     DH+   +K
Sbjct: 183 TAAKNWAHLPPVNGEG--DHVGSGRK 189

BLAST of CaUC08G157420 vs. ExPASy TrEMBL
Match: A0A6J1HCV6 (axial regulator YABBY 4-like OS=Cucurbita moschata OX=3662 GN=LOC111462354 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.3e-77
Identity = 162/207 (78.26%), Postives = 170/207 (82.13%), Query Frame = 0

Query: 2   STVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMAK 61
           ST+E LL D SEQIRYVQCGLCSTILL    VNVPYSNLSMVVSVRCGNC+GLLSVNMAK
Sbjct: 3   STLEHLLPDPSEQIRYVQCGLCSTILL----VNVPYSNLSMVVSVRCGNCTGLLSVNMAK 62

Query: 62  PSFIPFDLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHN 121
           PSFIPFDLLTSLSHN           LPKEPF Q+ NV QKH CLD+ +N SDL+TSYHN
Sbjct: 63  PSFIPFDLLTSLSHN-----------LPKEPF-QDLNV-QKHLCLDNRNNASDLLTSYHN 122

Query: 122 IIHNHE--DDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAF 181
           II NHE  DDDD IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAF
Sbjct: 123 IIQNHEDDDDDDAIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAF 182

Query: 182 KTAAKNWAHLPPVNAAAGVDHMTMRKK 207
           KTAAKNWAHLPPVN     DH+   +K
Sbjct: 183 KTAAKNWAHLPPVNGEG--DHVGSGRK 190

BLAST of CaUC08G157420 vs. ExPASy TrEMBL
Match: A0A6J1BTL6 (axial regulator YABBY 4-like OS=Momordica charantia OX=3673 GN=LOC111005217 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.0e-66
Identity = 154/211 (72.99%), Postives = 165/211 (78.20%), Query Frame = 0

Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMA 60
           MSTVE LL DSSE+IRYVQCGLCSTILL    VNVPYSNLSMVVSVRCGNC+GLLSVNMA
Sbjct: 1   MSTVEDLL-DSSEEIRYVQCGLCSTILL----VNVPYSNLSMVVSVRCGNCTGLLSVNMA 60

Query: 61  KPSFIPFDLLTSLSHNLVPNAPKFTLSLPKE-PFAQEFNVGQKHYCLDSLSNTSDLITSY 120
            PSFIPFDLLTSLSHN           LPK+  F Q+F++          + TSDLI S 
Sbjct: 61  MPSFIPFDLLTSLSHN-----------LPKQLAFGQDFDLN---------NVTSDLIASN 120

Query: 121 HNIIHNHEDDDDVII-IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEA 180
           HNII +HEDD D+II IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEA
Sbjct: 121 HNIIQDHEDDPDLIINIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEA 180

Query: 181 FKTAAKNWAHLPPVNAAAGVDHMTMRKKNVM 210
           FKTAAKNWAHLPP   A G +   MRKK V+
Sbjct: 181 FKTAAKNWAHLPP---AHGEEGDQMRKKIVV 183

BLAST of CaUC08G157420 vs. TAIR 10
Match: AT1G23420.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 161.8 bits (408), Expect = 6.1e-40
Identity = 102/208 (49.04%), Postives = 131/208 (62.98%), Query Frame = 0

Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMA 60
           M+T    L D   QI +VQCG C+TILL    V+VP+++LSMVV+VRCG+C+ LLSVN+ 
Sbjct: 7   MTTTLNHLFDLPGQICHVQCGFCTTILL----VSVPFTSLSMVVTVRCGHCTSLLSVNLM 66

Query: 61  KPSFIPFDLLTSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYH 120
           K SFIP  LL SLSH  +    K  ++       + + V Q     +  ++ + L++S  
Sbjct: 67  KASFIPLHLLASLSH--LDETGKEEVAATDGVEEEAWKVNQ-----EKENSPTTLVSSSD 126

Query: 121 NIIHNHEDDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFK 180
           N      +D+DV  +    VVNKPPEK+QRAPSAYN FIKEEIRRLKA+NP+MAHKEAF 
Sbjct: 127 N------EDEDVSRV--YQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFS 186

Query: 181 TAAKNWAHLPPV-NAAAGVDHMTMRKKN 208
            AAKNWAH PP  N  A  D     + N
Sbjct: 187 LAAKNWAHFPPAHNKRAASDQCFCEEDN 195

BLAST of CaUC08G157420 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 129.0 bits (323), Expect = 4.4e-30
Identity = 78/204 (38.24%), Postives = 117/204 (57.35%), Query Frame = 0

Query: 11  SSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLL 70
           S++Q+ YV C  C T+L     V+VP S+L   V+VRCG+CS LLSV ++  + +    +
Sbjct: 21  STDQLCYVHCSFCDTVLA----VSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALL-LPSV 80

Query: 71  TSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIH------ 130
           ++L H+ +P  P      P     +E   G ++  ++ +   S   +++H   H      
Sbjct: 81  SNLGHSFLPPPP----PPPPPNLLEEMRSGGQNINMNMM--MSHHASAHHPNEHLVMATR 140

Query: 131 NHEDDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAK 190
           N    D +  +P  P  N+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAK
Sbjct: 141 NGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAK 200

Query: 191 NWAHLPPVNAAAGVDHMTMRKKNV 209
           NWAH P ++     DH   +K NV
Sbjct: 201 NWAHFPHIHFGLMADHPPTKKANV 213

BLAST of CaUC08G157420 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-29
Identity = 79/200 (39.50%), Postives = 114/200 (57.00%), Query Frame = 0

Query: 12  SEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLLT 71
           S+ + YVQC  C TIL     VNVPY++L   V+VRCG C+ LLSVNM            
Sbjct: 22  SDHLCYVQCNFCQTILA----VNVPYTSLFKTVTVRCGCCTNLLSVNMRS---------- 81

Query: 72  SLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYH---NIIHNHED 131
                ++P + +  L L    +    ++ ++    D+ SN + ++ + H   N I +  D
Sbjct: 82  ----YVLPASNQLQLQLGPHSYFNPQDILEE--LRDAPSNMNMMMMNQHPTMNDIPSFMD 141

Query: 132 DDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAH 191
                 IP  P VN+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH
Sbjct: 142 LHQQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAH 201

Query: 192 LPPVNAAAGVDHMTMRKKNV 209
            P ++     D+  ++K N+
Sbjct: 202 FPHIHFGLVPDNQPVKKTNM 201

BLAST of CaUC08G157420 vs. TAIR 10
Match: AT4G00180.2 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 115.9 bits (289), Expect = 3.8e-26
Identity = 70/182 (38.46%), Postives = 105/182 (57.69%), Query Frame = 0

Query: 33  VNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLLTSLSHNLVPNAPKFTLSLPKEP 92
           V+VP S+L   V+VRCG+CS LLSV ++  + +    +++L H+ +P  P      P   
Sbjct: 8   VSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALL-LPSVSNLGHSFLPPPP----PPPPPN 67

Query: 93  FAQEFNVGQKHYCLDSLSNTSDLITSYHNIIH------NHEDDDDVIIIPPTPVVNKPPE 152
             +E   G ++  ++ +   S   +++H   H      N    D +  +P  P  N+PPE
Sbjct: 68  LLEEMRSGGQNINMNMM--MSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPE 127

Query: 153 KKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAAAGVDHMTMRKK 209
           K+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH P ++     DH   +K 
Sbjct: 128 KRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKA 182

BLAST of CaUC08G157420 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-25
Identity = 75/190 (39.47%), Postives = 107/190 (56.32%), Query Frame = 0

Query: 11  SSEQIRYVQCGLCSTILLVRSHVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLL 70
           SSE++ YV C  C+TIL     V+VPY++L  +V+VRCG+C+ LLS+N+           
Sbjct: 6   SSERVCYVHCSFCTTILA----VSVPYASLFTLVTVRCGHCTNLLSLNIG---------- 65

Query: 71  TSLSHNLVPNAPKFTLSLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHED-D 130
            SL     P            P  Q+    ++H    SL    D  +S  +  +  E+ D
Sbjct: 66  VSLHQTSAP------------PIHQDLQPHRQH--TTSLVTRKDCASSSRSTNNLSENID 125

Query: 131 DDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHL 190
            +   +PP     +PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF TAAKNWAH 
Sbjct: 126 REAPRMPPI----RPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHF 163

Query: 191 PPVNAAAGVD 200
           P ++    +D
Sbjct: 186 PHIHFGLKLD 163

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0061079.11.6e-8785.85axial regulator YABBY 4 isoform X2 [Cucumis melo var. makuwa][more]
KAE8652041.14.8e-8785.38hypothetical protein Csa_018647 [Cucumis sativus][more]
XP_004143066.24.8e-8785.38axial regulator YABBY 4 [Cucumis sativus][more]
XP_038886536.11.1e-8381.90axial regulator YABBY 4-like [Benincasa hispida][more]
XP_022997624.11.4e-7880.10axial regulator YABBY 4-like [Cucurbita maxima] >XP_023545650.1 axial regulator ... [more]
Match NameE-valueIdentityDescription
Q9LDT38.5e-3949.04Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2[more]
Q9XFB16.1e-2938.24Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1[more]
O221521.8e-2839.50Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1[more]
Q8L5564.1e-2535.17Protein YABBY 3 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB3 PE=2 SV=1[more]
Q9XFB01.6e-2439.47Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV... [more]
Match NameE-valueIdentityDescription
A0A5A7V5T87.9e-8885.85Axial regulator YABBY 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A0A0LK602.3e-8785.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348870 PE=3 SV=1[more]
A0A6J1KC106.7e-7980.10axial regulator YABBY 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492500 PE=3 SV... [more]
A0A6J1HCV66.3e-7778.26axial regulator YABBY 4-like OS=Cucurbita moschata OX=3662 GN=LOC111462354 PE=3 ... [more]
A0A6J1BTL61.0e-6672.99axial regulator YABBY 4-like OS=Momordica charantia OX=3673 GN=LOC111005217 PE=3... [more]
Match NameE-valueIdentityDescription
AT1G23420.16.1e-4049.04Plant-specific transcription factor YABBY family protein [more]
AT4G00180.14.4e-3038.24Plant-specific transcription factor YABBY family protein [more]
AT2G45190.11.3e-2939.50Plant-specific transcription factor YABBY family protein [more]
AT4G00180.23.8e-2638.46Plant-specific transcription factor YABBY family protein [more]
AT1G08465.11.1e-2539.47Plant-specific transcription factor YABBY family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006780YABBY proteinPFAMPF04690YABBYcoord: 11..193
e-value: 1.1E-50
score: 172.5
IPR006780YABBY proteinPANTHERPTHR31675PROTEIN YABBY 6-RELATEDcoord: 1..203
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10High mobility group box domaincoord: 139..200
e-value: 1.7E-8
score: 36.6
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 139..191
NoneNo IPR availablePANTHERPTHR31675:SF8AXIAL REGULATOR YABBY 4coord: 1..203
NoneNo IPR availableCDDcd01390HMGB-UBF_HMG-boxcoord: 150..191
e-value: 7.53597E-6
score: 40.3038

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC08G157420.1CaUC08G157420.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045165 cell fate commitment
biological_process GO:0048481 plant ovule development
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0007275 multicellular organism development
cellular_component GO:0005634 nucleus