CaUC08G156700 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G156700
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	Ciama_Chr08: 28141490 .. 28141780 (-)
RNA-Seq Expression	CaUC08G156700
Synteny	CaUC08G156700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCAATTGCTCTGGGTCAGCTTGCCACCGGCCTGAGTTTGCTGGCCGGCGCCGTGGTGGTGAAGTCCGTCATTGAACAGAAACTACCGACGGCAGGGACGATGCCGAGGTGCCCGACTTGTAATGGGTCGGGTCGGGTCACATGTCTATGTGCCCGGTGGTCGGATGGAGATGTTGGGTGCCGATCATGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGTTGCGGTGGTGGGGGAAGAGGGCGGCCGATCACCCTACAATTATCGACTAACCAACTAAACCGTTGA

mRNA sequence

ATGGATCCAATTGCTCTGGGTCAGCTTGCCACCGGCCTGAGTTTGCTGGCCGGCGCCGTGGTGGTGAAGTCCGTCATTGAACAGAAACTACCGACGGCAGGGACGATGCCGAGGTGCCCGACTTGTAATGGGTCGGGTCGGGTCACATGTCTATGTGCCCGGTGGTCGGATGGAGATGTTGGGTGCCGATCATGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGTTGCGGTGGTGGGGGAAGAGGGCGGCCGATCACCCTACAATTATCGACTAACCAACTAAACCGTTGA

Coding sequence (CDS)

ATGGATCCAATTGCTCTGGGTCAGCTTGCCACCGGCCTGAGTTTGCTGGCCGGCGCCGTGGTGGTGAAGTCCGTCATTGAACAGAAACTACCGACGGCAGGGACGATGCCGAGGTGCCCGACTTGTAATGGGTCGGGTCGGGTCACATGTCTATGTGCCCGGTGGTCGGATGGAGATGTTGGGTGCCGATCATGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGTTGCGGTGGTGGGGGAAGAGGGCGGCCGATCACCCTACAATTATCGACTAACCAACTAAACCGTTGA

Protein sequence

MDPIALGQLATGLSLLAGAVVVKSVIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITLQLSTNQLNR

Homology

[Close]

BLAST of CaUC08G156700 vs. NCBI nr
Match: XP_004142934.1 (uncharacterized protein LOC101220122 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 9.9e-40
Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 1  MDPIALGQLATGLSLLAGAVVVKSVIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MD IAL QLATGLS+LAGAVVVKSVIEQKLP AG+MPRCPTC GSGRVTC+C RWSDGDV
Sbjct: 1  MDQIALSQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCICVRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITLQLSTNQLNR 97
          GCRSCSGSGRMSCRSCGGGGRGRPIT+QLS +Q NR
Sbjct: 61 GCRSCSGSGRMSCRSCGGGGRGRPITVQLSMSQSNR 96

[Close]

BLAST of CaUC08G156700 vs. NCBI nr
Match: KAA0061011.1 (uncharacterized protein E6C27_scaffold501G001460 [Cucumis melo var. makuwa])

HSP 1 Score: 172.2 bits (435), Expect = 2.2e-39
Identity = 84/96 (87.50%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1  MDPIALGQLATGLSLLAGAVVVKSVIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MD IAL QLATGLS+LAGAVVVKSVIEQKLP AG+MPRCPTC GSGRVTCLC RWSDGDV
Sbjct: 1  MDQIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITLQLSTNQLNR 97
          GCRSCSGSGRMSCRSCGGGGRGRPI++QLST+Q +R
Sbjct: 61 GCRSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR 96

[Close]

BLAST of CaUC08G156700 vs. NCBI nr
Match: KAG6585227.1 (hypothetical protein SDJN03_17960, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020147.1 hypothetical protein SDJN02_16829, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 164.1 bits (414), Expect = 6.0e-37
Identity = 82/95 (86.32%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 1  MDPIALGQLATGLSLLAGAVVVKSVIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MDPIAL Q+ATGLS+LAGAVVVKSVIEQK P A  MPRC TCNGSGRVTCLC RWSDGDV
Sbjct: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITLQLSTNQLN 96
          GCRSCSGSGRMSCRSCGGGGRGRPIT+QLS +Q N
Sbjct: 61 GCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN 94

[Close]

BLAST of CaUC08G156700 vs. NCBI nr
Match: XP_022132135.1 (uncharacterized protein LOC111005075 [Momordica charantia])

HSP 1 Score: 158.7 bits (400), Expect = 2.5e-35
Identity = 76/96 (79.17%), Postives = 85/96 (88.54%), Query Frame = 0


Query: 1  MDPIALGQLATGLSLLAGAVVVKSVIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MDP+ L QLATGLS++AGAVVVKSV++QK P AG +P CPTCNGSGRVTC+C RWSDGD 
Sbjct: 1  MDPMGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPTCPTCNGSGRVTCICVRWSDGDF 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITLQLSTNQLNR 97
          GCRSC+GSGRMSCRSCGGGGRGRPIT+QLS  Q NR
Sbjct: 61 GCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR 95

[Close]

BLAST of CaUC08G156700 vs. NCBI nr
Match: KGN62638.2 (hypothetical protein Csa_018726 [Cucumis sativus])

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-31
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 1  MDPIALGQLATGLSLLAGAVVVKSVIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MD IAL QLATGLS+LAGAVVVKSVIEQKLP AG+MPRCPTC GSGRVTC+C RWSDGDV
Sbjct: 1  MDQIALSQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCICVRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSCGG 79
          GCRSCSGSGRMSCRSCGG
Sbjct: 61 GCRSCSGSGRMSCRSCGG 78

[Close]

BLAST of CaUC08G156700 vs. ExPASy TrEMBL
Match: A0A0A0LKQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351540 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.8e-40
Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 1  MDPIALGQLATGLSLLAGAVVVKSVIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MD IAL QLATGLS+LAGAVVVKSVIEQKLP AG+MPRCPTC GSGRVTC+C RWSDGDV
Sbjct: 1  MDQIALSQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCICVRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITLQLSTNQLNR 97
          GCRSCSGSGRMSCRSCGGGGRGRPIT+QLS +Q NR
Sbjct: 61 GCRSCSGSGRMSCRSCGGGGRGRPITVQLSMSQSNR 96

[Close]

BLAST of CaUC08G156700 vs. ExPASy TrEMBL
Match: A0A5A7V5E2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001460 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39
Identity = 84/96 (87.50%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1  MDPIALGQLATGLSLLAGAVVVKSVIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MD IAL QLATGLS+LAGAVVVKSVIEQKLP AG+MPRCPTC GSGRVTCLC RWSDGDV
Sbjct: 1  MDQIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITLQLSTNQLNR 97
          GCRSCSGSGRMSCRSCGGGGRGRPI++QLST+Q +R
Sbjct: 61 GCRSCSGSGRMSCRSCGGGGRGRPISVQLSTSQSHR 96

[Close]

BLAST of CaUC08G156700 vs. ExPASy TrEMBL
Match: A0A6J1BRL0 (uncharacterized protein LOC111005075 OS=Momordica charantia OX=3673 GN=LOC111005075 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-35
Identity = 76/96 (79.17%), Postives = 85/96 (88.54%), Query Frame = 0


Query: 1  MDPIALGQLATGLSLLAGAVVVKSVIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          MDP+ L QLATGLS++AGAVVVKSV++QK P AG +P CPTCNGSGRVTC+C RWSDGD 
Sbjct: 1  MDPMGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPTCPTCNGSGRVTCICVRWSDGDF 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITLQLSTNQLNR 97
          GCRSC+GSGRMSCRSCGGGGRGRPIT+QLS  Q NR
Sbjct: 61 GCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR 95

[Close]

BLAST of CaUC08G156700 vs. ExPASy TrEMBL
Match: W9RCB8 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001360 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.2e-30
Identity = 66/95 (69.47%), Postives = 80/95 (84.21%), Query Frame = 0


Query: 1  MDPIALGQLATGLSLLAGAVVVKSVIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M+PI L Q+ATGLS+L GAV+VKSV++QK P AG  PRCP+CNG+GRVTCLC+RWSDGD+
Sbjct: 1  MEPIVLTQVATGLSVLVGAVLVKSVMDQK-PMAGPFPRCPSCNGTGRVTCLCSRWSDGDI 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITLQLSTNQLN 96
          GCR+C+GSGRM C SCGG G GRPIT Q+S  + N
Sbjct: 61 GCRTCAGSGRMGCSSCGGSGTGRPITAQISVRRPN 94

[Close]

BLAST of CaUC08G156700 vs. ExPASy TrEMBL
Match: A0A5N6R398 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009371 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.6e-30
Identity = 69/96 (71.88%), Postives = 79/96 (82.29%), Query Frame = 0


Query: 1  MDPIALGQLATGLSLLAGAVVVKSVIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M PI L QLATGLS+LAGAV+VKSV++QK P AG  PRCP+CNG+GRVTCLC+RWSDGDV
Sbjct: 1  MGPIVLTQLATGLSVLAGAVLVKSVMDQK-PMAGPFPRCPSCNGTGRVTCLCSRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITLQLSTNQLNR 97
          GCR+C+GSGRM CRSCGG G GRP+  QL     NR
Sbjct: 61 GCRACAGSGRMGCRSCGGTGTGRPLPAQLIVRPPNR 95

[Close]

BLAST of CaUC08G156700 vs. TAIR 10
Match: AT5G43260.1 (chaperone protein dnaJ-related )

HSP 1 Score: 135.6 bits (340), Expect = 2.1e-32
Identity = 63/96 (65.62%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 1  MDPIALGQLATGLSLLAGAVVVKSVIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDV 60
          M PI + QLATG+S+LAGAV +KSV++QK P AG  PRCPTCNG+GRVTC C+RWSDGDV
Sbjct: 1  MSPIVITQLATGISVLAGAVFIKSVMDQK-PMAGQFPRCPTCNGTGRVTCFCSRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITLQLSTNQLNR 97
          GCR CSGSGR +C +CGG G GRP+  Q++    NR
Sbjct: 61 GCRRCSGSGRAACSNCGGSGTGRPLPAQITVQPPNR 95

The following BLAST results are available for this feature:

BLAST of CaUC08G156700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142934.1	9.9e-40	87.50	uncharacterized protein LOC101220122 [Cucumis sativus]	[more]
KAA0061011.1	2.2e-39	87.50	uncharacterized protein E6C27_scaffold501G001460 [Cucumis melo var. makuwa]	[more]
KAG6585227.1	6.0e-37	86.32	hypothetical protein SDJN03_17960, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022132135.1	2.5e-35	79.17	uncharacterized protein LOC111005075 [Momordica charantia]	[more]
KGN62638.2	1.7e-31	89.74	hypothetical protein Csa_018726 [Cucumis sativus]	[more]

BLAST of CaUC08G156700 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC08G156700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKQ8	4.8e-40	87.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351540 PE=4 SV=1	[more]
A0A5A7V5E2	1.1e-39	87.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1BRL0	1.2e-35	79.17	uncharacterized protein LOC111005075 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
W9RCB8	1.2e-30	69.47	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001360 PE=4 SV=1	[more]
A0A5N6R398	1.6e-30	71.88	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009371 PE=4 SV=1	[more]

BLAST of CaUC08G156700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43260.1	2.1e-32	65.63	chaperone protein dnaJ-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34687	CHAPERONE PROTEIN DNAJ-LIKE PROTEIN	coord: 1..91
None	No IPR available	PANTHER	PTHR34687:SF4	BNAC09G17400D PROTEIN	coord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G156700.1	CaUC08G156700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane