CaUC08G153290 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G153290
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Eukaryotic translation initiation factor 5A
Location	Ciama_Chr08: 25045395 .. 25047815 (+)
RNA-Seq Expression	CaUC08G153290
Synteny	CaUC08G153290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCTTCATCATCTTCTTGGCTGTTCCCAGAATCTTCAATGTCGGACGAAGAGCATCATTTTGAGTCGAAGGCCGACGCCGGAGCCTCCAAGACCTTCCCTCAGCAGGCCGGAACCATCCGCAAGAATGGCTACATTGTCATCAAGGGCCGTCCCTGTAAGGTAAACCCATTATGATCTTCTCTCTTTTTATTTCATCCAAGGAATTGATCTCCTTTGTTCTTTTTTTTTTTTTTTTTTTTTCTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTCTCTGTATACTCAATTGCTATAGTTTTACTTTTCAGATTAAATTGTGTCTTTGATTTTATTGTTGGGTTTTTAGGGTTAAAATCAGATTTTAATCACTGTTCTTGCTTTTTTGTTTTCAGTAGTTTCCTGTATTATTTAGGAATTTAATGATGTTTTCATTAATACTTTCAGTAGTTTTTTTTTTATTAACTTGCTTTCTGAGTTCTACTGACTTCAATTTTGTAAGCTTGTTATGCAATCAACATGCTGATTGGGTCTTAAATAGCATCCATAATTTGATTCTCAATCTCTAACAACAAGGGTTACTAAATGTTATTTTGTTGTTACTATTTTTCTCTTTCTTTCTTTTTTTCCTGTTATTATTGTCATTGATGTGGTATTTTTTGTTGCTGAATTAAAGGGATCTCTTTCCATACATTATTAGAGCAGTAAACAAATCAGACTCTTATTCTATTGATTTGTTCATTCAAGAGGCAGTGTTTCAGAAGTCTTCTTCATGTGCCATCAAACCAATGGCCAATTGGCATAACTGTATAGGAGCTTTGATCTTCATATTATTCATTTTTAATGATATTATGTTAAAGTAGGTAGTTGAGGTTTCTACATCCAAGACTGGAAAGCATGGGCATGCTAAATGTCACTTTGTGGCAATTGATATCTTCACCTCCAAAAAACTTGAAGATATTGTTCCATCATCCCACAACTGTGATGTGAGTATCCCATCTGTCTTGTTTGCTTACCTTTTTGGCCTGCTAGCACTTTTCCTTCTTTTACTTTGTGTGTGTGTGTGTTTTTAAATCAGGTTTGCATAGCTGCTTTCTGTCTCATATTCTCCCCATTCTGTAGGTCCCTGAGGTTACTCGTACTGACTATCAGCTTATTGACATATCTGAAGATGGATTTGTGAGTTTTTTTTCTCATTACTTTTGATTTGAATAGCCAAATTTTGGTTAACAAGGGATTTTCATCACATATTTGTATGTTGATTCCAACTTCGGCATCATATTTCCTTTACTTAATACTGAATAGATCCTTAAATATTATACTTAAGATAGATTCGCCGTACAAGAATATGATAAGTTCACATCTAACTGAAGTAGTTTGATCTTTACTCTAGTCACATCCTGGATGGTGTCTGCATTTAGGTTTAAAATCAAATAGTTAACACTAAAACATAAATTTAAGAATTGAAGGGATGTGAACAAAATAATTGAAGCTTTACTCTAGTCACATCCTGGATGGTGTCTGCTTTCTCCACTGTATTCTGCGAGTCTGAAGCTTTAGTATTGTAGTTTACGACATTGTGTTGGATTTACTTCGATGCGATGATTGGCCTTACTGAAATCTGGTTTGTTGTTAGGTGAGCCTGTTGACTGACAATGGAAGCACAAAGGATGATTTGAGGCTTCCTACTGATGAAAGTTTACTTGCTCAGGTAAGGCTCTGCACATACTGATTCTCCTAAATTCACAACACACACATATTGCTTGTTATCTTGTCCATCGTATTATCATTGAGCACTAACTAGCTTTCACACGCTTCATGCCTCGGTTCCAGATTAAAGATGGATTTGCAGAAGGAAAGGACCTTGTTGTGAGCGTCATGTCAGCCATGGGAGAGGAACAAATCTGTGGCTTGAAGGATATTGGCCCAAAGAACTAA

mRNA sequence

TTCTTCTTCTTCATCATCTTCTTGGCTGTTCCCAGAATCTTCAATGTCGGACGAAGAGCATCATTTTGAGTCGAAGGCCGACGCCGGAGCCTCCAAGACCTTCCCTCAGCAGGCCGGAACCATCCGCAAGAATGGCTACATTGTCATCAAGGGCCGTCCCTGTAAGGTAGTTGAGGTTTCTACATCCAAGACTGGAAAGCATGGGCATGCTAAATGTCACTTTGTGGCAATTGATATCTTCACCTCCAAAAAACTTGAAGATATTGTTCCATCATCCCACAACTGTGATGTCCCTGAGGTTACTCGTACTGACTATCAGCTTATTGACATATCTGAAGATGGATTTGTGAGCCTGTTGACTGACAATGGAAGCACAAAGGATGATTTGAGGCTTCCTACTGATGAAAGTTTACTTGCTCAGATTAAAGATGGATTTGCAGAAGGAAAGGACCTTGTTGTGAGCGTCATGTCAGCCATGGGAGAGGAACAAATCTGTGGCTTGAAGGATATTGGCCCAAAGAACTAA

Coding sequence (CDS)

ATGTCGGACGAAGAGCATCATTTTGAGTCGAAGGCCGACGCCGGAGCCTCCAAGACCTTCCCTCAGCAGGCCGGAACCATCCGCAAGAATGGCTACATTGTCATCAAGGGCCGTCCCTGTAAGGTAGTTGAGGTTTCTACATCCAAGACTGGAAAGCATGGGCATGCTAAATGTCACTTTGTGGCAATTGATATCTTCACCTCCAAAAAACTTGAAGATATTGTTCCATCATCCCACAACTGTGATGTCCCTGAGGTTACTCGTACTGACTATCAGCTTATTGACATATCTGAAGATGGATTTGTGAGCCTGTTGACTGACAATGGAAGCACAAAGGATGATTTGAGGCTTCCTACTGATGAAAGTTTACTTGCTCAGATTAAAGATGGATTTGCAGAAGGAAAGGACCTTGTTGTGAGCGTCATGTCAGCCATGGGAGAGGAACAAATCTGTGGCTTGAAGGATATTGGCCCAAAGAACTAA

Protein sequence

MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTDESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN

Homology

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BLAST of CaUC08G153290 vs. NCBI nr
Match: XP_008445267.1 (PREDICTED: eukaryotic translation initiation factor 5A-4-like [Cucumis melo] >XP_038884938.1 eukaryotic translation initiation factor 5A-4-like [Benincasa hispida])

HSP 1 Score: 323.9 bits (829), Expect = 7.6e-85
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN 161
           ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN
Sbjct: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN 160

[Close]

BLAST of CaUC08G153290 vs. NCBI nr
Match: XP_004138702.1 (eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN62994.1 hypothetical protein Csa_022421 [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 6.4e-84
Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT KK+EDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD
Sbjct: 61  VAIDIFTGKKVEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN 161
           ESLL QIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN
Sbjct: 121 ESLLTQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN 160

[Close]

BLAST of CaUC08G153290 vs. NCBI nr
Match: XP_022962181.1 (eukaryotic translation initiation factor 5A-2-like [Cucurbita moschata] >XP_023545516.1 eukaryotic translation initiation factor 5A-2-like [Cucurbita pepo subsp. pepo] >KAG6598545.1 Eukaryotic translation initiation factor 5A-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029478.1 Eukaryotic translation initiation factor 5A-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315.5 bits (807), Expect = 2.7e-82
Identity = 154/160 (96.25%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTFPQQAGTIRKNGY+VIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD
Sbjct: 61  VAIDIFTTKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN 161
           +SLL QIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPK+
Sbjct: 121 DSLLTQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKS 160

[Close]

BLAST of CaUC08G153290 vs. NCBI nr
Match: XP_010101033.1 (eukaryotic translation initiation factor 5A-4 [Morus notabilis] >EXB86681.1 Eukaryotic translation initiation factor 5A-4 [Morus notabilis])

HSP 1 Score: 313.2 bits (801), Expect = 1.3e-81
Identity = 152/160 (95.00%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVP V RTDYQLIDISEDGFVSLLTDNG+TKDDLRLPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN 161
           E+LL+QIKDGFAEGKDLVVSVMSAMGEEQIC LKDIGPKN
Sbjct: 121 EALLSQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPKN 160

[Close]

BLAST of CaUC08G153290 vs. NCBI nr
Match: XP_010908239.1 (eukaryotic translation initiation factor 5A-2 [Elaeis guineensis])

HSP 1 Score: 311.6 bits (797), Expect = 3.9e-81
Identity = 151/159 (94.97%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAID+FT+KKLEDIVPSSHNCDVP VTRTDYQLIDISEDGFVSLLTD+G+TKDDLRLPTD
Sbjct: 61  VAIDVFTAKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTDSGNTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPK 160
           E+LLAQIKDGFAEGKDLVV+VMSAMGEEQIC LKDIGPK
Sbjct: 121 ETLLAQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CaUC08G153290 vs. ExPASy Swiss-Prot
Match: P56337 (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum OX=4113 GN=EIF5A5 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.4e-81
Identity = 145/159 (91.19%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAGTIRK+G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT KKLEDIVPSSHNCDVP V RTDYQLIDISEDGFVSLLT+NG+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPK 160
           ++LLAQ+KDGFAEGKDLV+SVMSAMGEEQICG+KDIGPK
Sbjct: 121 DTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159

[Close]

BLAST of CaUC08G153290 vs. ExPASy Swiss-Prot
Match: Q9AXQ6 (Eukaryotic translation initiation factor 5A-1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-81
Identity = 145/159 (91.19%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAGTIRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT KKLEDIVPSSHNCDVP V RTDYQLIDISEDGFVSLLT+NG+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPK 160
           ++LLAQ+KDGFAEGKDLV+SVMSAMGEEQICG+KDIGPK
Sbjct: 121 DTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159

[Close]

BLAST of CaUC08G153290 vs. ExPASy Swiss-Prot
Match: P24922 (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-81
Identity = 147/159 (92.45%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKT+PQQAGTIRKNG+IVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT KKLEDIVPSSHNCDVP V RTDYQLIDISEDGFVSLLT+NG+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPK 160
           ++LL QIKDGFAEGKDLVVSVMSAMGEEQIC LKDIGPK
Sbjct: 121 DNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CaUC08G153290 vs. ExPASy Swiss-Prot
Match: P69039 (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A1 PE=2 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 4.1e-81
Identity = 145/159 (91.19%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAGTIRKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT KKLEDIVPSSHNCDVP V RTDYQLIDISEDGFVSLLT+NG+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPK 160
           ++LLA IKDGFAEGKDLV+SVMSAMGEEQICG+KD+GPK
Sbjct: 121 DNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159

[Close]

BLAST of CaUC08G153290 vs. ExPASy Swiss-Prot
Match: P69040 (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum OX=4097 GN=EIF-5A1 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 4.1e-81
Identity = 145/159 (91.19%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAGTIRKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT KKLEDIVPSSHNCDVP V RTDYQLIDISEDGFVSLLT+NG+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPK 160
           ++LLA IKDGFAEGKDLV+SVMSAMGEEQICG+KD+GPK
Sbjct: 121 DNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159

[Close]

BLAST of CaUC08G153290 vs. ExPASy TrEMBL
Match: A0A1S3BC90 (Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103488350 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 3.7e-85
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN 161
           ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN
Sbjct: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN 160

[Close]

BLAST of CaUC08G153290 vs. ExPASy TrEMBL
Match: A0A0A0LPT1 (Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_2G382670 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.1e-84
Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT KK+EDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD
Sbjct: 61  VAIDIFTGKKVEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN 161
           ESLL QIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN
Sbjct: 121 ESLLTQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN 160

[Close]

BLAST of CaUC08G153290 vs. ExPASy TrEMBL
Match: A0A6J1HCD8 (Eukaryotic translation initiation factor 5A OS=Cucurbita moschata OX=3662 GN=LOC111462714 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82
Identity = 154/160 (96.25%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTFPQQAGTIRKNGY+VIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTFPQQAGTIRKNGYLVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD
Sbjct: 61  VAIDIFTTKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN 161
           +SLL QIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPK+
Sbjct: 121 DSLLTQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKS 160

[Close]

BLAST of CaUC08G153290 vs. ExPASy TrEMBL
Match: W9S3D3 (Eukaryotic translation initiation factor 5A OS=Morus notabilis OX=981085 GN=L484_013212 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 6.5e-82
Identity = 152/160 (95.00%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVP V RTDYQLIDISEDGFVSLLTDNG+TKDDLRLPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPKN 161
           E+LL+QIKDGFAEGKDLVVSVMSAMGEEQIC LKDIGPKN
Sbjct: 121 EALLSQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPKN 160

[Close]

BLAST of CaUC08G153290 vs. ExPASy TrEMBL
Match: B3TLM2 (Eukaryotic translation initiation factor 5A OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105034691 PE=2 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 151/159 (94.97%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAID+FT+KKLEDIVPSSHNCDVP VTRTDYQLIDISEDGFVSLLTD+G+TKDDLRLPTD
Sbjct: 61  VAIDVFTAKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTDSGNTKDDLRLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPK 160
           E+LLAQIKDGFAEGKDLVV+VMSAMGEEQIC LKDIGPK
Sbjct: 121 ETLLAQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of CaUC08G153290 vs. TAIR 10
Match: AT1G13950.1 (eukaryotic elongation factor 5A-1 )

HSP 1 Score: 286.6 bits (732), Expect = 1.3e-77
Identity = 142/159 (89.31%), Postives = 149/159 (93.71%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFES +DAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFTSKKLEDIVPSSHNCDVP V RTDYQLIDISEDG+VSLLTDNGSTKDDL+LP D
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPND 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPK 160
           ++LL QIK GF +GKDLVVSVMSAMGEEQI  LKDIGPK
Sbjct: 121 DTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158

[Close]

BLAST of CaUC08G153290 vs. TAIR 10
Match: AT1G69410.1 (eukaryotic elongation factor 5A-3 )

HSP 1 Score: 286.2 bits (731), Expect = 1.6e-77
Identity = 138/159 (86.79%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFES +DAGASKT+PQQAG IRK G+IVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFTSKKLEDIVPSSHNCDVP V R DYQLIDISEDGFVSLLTDNGSTKDDL+LPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIGPK 160
           E+LL Q+K+GF EGKD+VVSVMSAMGEEQ+C LK++GPK
Sbjct: 121 EALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158

[Close]

BLAST of CaUC08G153290 vs. TAIR 10
Match: AT1G26630.1 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 260.8 bits (665), Expect = 7.4e-70
Identity = 124/157 (78.98%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFE+ +++GASKT+PQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVP V R DYQLIDI+EDGFVSLLTD+G TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 121 ESLLAQIKDGFAEGKDLVVSVMSAMGEEQICGLKDIG 158
           + L AQ++ GF EGKD+VVSVMS+MGEEQIC +K++G
Sbjct: 121 DGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156

[Close]

BLAST of CaUC08G153290 vs. TAIR 10
Match: AT1G26630.2 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 217.2 bits (552), Expect = 9.3e-57
Identity = 103/127 (81.10%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60
           MSD+EHHFE+ +++GASKT+PQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VAIDIFTSKKLEDIVPSSHNCDVPEVTRTDYQLIDISEDGFVSLLTDNGSTKDDLRLPTD 120
           VAIDIFT+KKLEDIVPSSHNCDVP V R DYQLIDI+EDGFVSLLTD+G TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 121 ESLLAQI 128
           + L AQ+
Sbjct: 121 DGLTAQL 126

The following BLAST results are available for this feature:

BLAST of CaUC08G153290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445267.1	7.6e-85	99.38	PREDICTED: eukaryotic translation initiation factor 5A-4-like [Cucumis melo] >XP...	[more]
XP_004138702.1	6.4e-84	98.13	eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN62994.1 hypo...	[more]
XP_022962181.1	2.7e-82	96.25	eukaryotic translation initiation factor 5A-2-like [Cucurbita moschata] >XP_0235...	[more]
XP_010101033.1	1.3e-81	95.00	eukaryotic translation initiation factor 5A-4 [Morus notabilis] >EXB86681.1 Euka...	[more]
XP_010908239.1	3.9e-81	94.97	eukaryotic translation initiation factor 5A-2 [Elaeis guineensis]	[more]

BLAST of CaUC08G153290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P56337	2.4e-81	91.19	Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum OX=4113 GN=EI...	[more]
Q9AXQ6	3.1e-81	91.19	Eukaryotic translation initiation factor 5A-1 OS=Solanum lycopersicum OX=4081 PE...	[more]
P24922	3.1e-81	92.45	Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=40...	[more]
P69039	4.1e-81	91.19	Eukaryotic translation initiation factor 5A-1 OS=Nicotiana plumbaginifolia OX=40...	[more]
P69040	4.1e-81	91.19	Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum OX=4097 GN=EI...	[more]

BLAST of CaUC08G153290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BC90	3.7e-85	99.38	Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103488...	[more]
A0A0A0LPT1	3.1e-84	98.13	Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_2G...	[more]
A0A6J1HCD8	1.3e-82	96.25	Eukaryotic translation initiation factor 5A OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
W9S3D3	6.5e-82	95.00	Eukaryotic translation initiation factor 5A OS=Morus notabilis OX=981085 GN=L484...	[more]
B3TLM2	1.9e-81	94.97	Eukaryotic translation initiation factor 5A OS=Elaeis guineensis var. tenera OX=...	[more]

BLAST of CaUC08G153290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13950.1	1.3e-77	89.31	eukaryotic elongation factor 5A-1	[more]
AT1G69410.1	1.6e-77	86.79	eukaryotic elongation factor 5A-3	[more]
AT1G26630.1	7.4e-70	78.98	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein	[more]
AT1G26630.2	9.3e-57	81.10	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020189	Translation elongation factor, IF5A C-terminal	SMART	SM01376	eIF_5a_2	coord: 85..154 e-value: 1.9E-32 score: 123.8
IPR020189	Translation elongation factor, IF5A C-terminal	PFAM	PF01287	eIF-5a	coord: 86..154 e-value: 6.9E-29 score: 99.8
IPR001884	Translation elongation factor IF5A-like	TIGRFAM	TIGR00037	TIGR00037	coord: 18..152 e-value: 1.2E-40 score: 136.3
IPR001884	Translation elongation factor IF5A-like	PIRSF	PIRSF003025	Transl_init_eIF5A	coord: 1..157 e-value: 2.5E-66 score: 220.0
IPR001884	Translation elongation factor IF5A-like	PANTHER	PTHR11673	TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER	coord: 1..156
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 1..85 e-value: 2.8E-43 score: 147.7
None	No IPR available	GENE3D	2.40.50.140		coord: 86..159 e-value: 8.2E-35 score: 120.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11673:SF42	BNAA07G09420D PROTEIN	coord: 1..156
None	No IPR available	CDD	cd04468	S1_eIF5A	coord: 86..156 e-value: 1.22558E-31 score: 106.468
IPR019769	Translation elongation factor, IF5A, hypusine site	PROSITE	PS00302	IF5A_HYPUSINE	coord: 50..57
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 86..156
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 15..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G153290.1	CaUC08G153290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045901	positive regulation of translational elongation
biological_process	GO:0045905	positive regulation of translational termination
biological_process	GO:0006413	translational initiation
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003723	RNA binding