CaUC08G153070 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAATTGCAGCAATCGTATGGCCCACCCTATTTTCAAAACTACCCTTCAATTTACAACAAAATTACGATCCACCCACACTCCCCACTCCGATCCCGCCTATAAATTCCACCGTCGAGACGAGCTAAGTTTACCGAAACGAATCCGAAATCCCCATTTACAGAGTGAACGAACAAAAACGCAAAATCAACCCAATCCCATGAAGAAGGAAACAAGCGGGCCTGTTCTCCGGCCATTTCCCGCCGCCGCCCGATTCCACTCTCCGATCTCTTCTCCGGGGACTTCTCCGTTCGCCGCCTCAACTAACTTCGGCTTCTCTTCCGGATCCTCAACCTTTTTCCAAAACCACGACGATCACAACCACCATCGACCCACTTCCCCTACTCGAGTCAATATTTCTTCCACTCCACTGTCTCGCTCTGTTCGATTTTCCATCGATCACCGGTCCGGTTCGCCGAGTCGATCCATCACAGTTTCCAACCGAAACTCGCCCGTTTCTCTACCCAAAAAGCCGTGCATGTGTTCGCCGACGACTCACCCCGGTTCCTTCCGGTGCAGTCTACATAAAAAGTCGGGAAGTAGCGGTCACCATCAGGCGTCGTCGGCGTATTCGTCGAGCGGTTTGAACATGCGGAGGTCTGCGATGACGAACTCGCTGGTGAGAATCGGTGGCGTTGAGGGAGACTGGGTCAAGCGAGCGTTGACTGCTTTGATTCGACCGTCTTCACATCAGCTGAGAAGGAGAGCAAATTTCCGACCGCAGCCCAGCCGGCTTTCGGTGATGTCGACGGCCGAAAATCTTCAAAACAAAGATTGA ATGGTGAATTGCAGCAATCGTATGGCCCACCCTATTTTCAAAACTACCCTTCAATTTACAACAAAATTACGATCCACCCACACTCCCCACTCCGATCCCGCCTATAAATTCCACCGTCGAGACGAGCTAAGTTTACCGAAACGAATCCGAAATCCCCATTTACAGAGTGAACGAACAAAAACGCAAAATCAACCCAATCCCATGAAGAAGGAAACAAGCGGGCCTGTTCTCCGGCCATTTCCCGCCGCCGCCCGATTCCACTCTCCGATCTCTTCTCCGGGGACTTCTCCGTTCGCCGCCTCAACTAACTTCGGCTTCTCTTCCGGATCCTCAACCTTTTTCCAAAACCACGACGATCACAACCACCATCGACCCACTTCCCCTACTCGAGTCAATATTTCTTCCACTCCACTGTCTCGCTCTGTTCGATTTTCCATCGATCACCGGTCCGGTTCGCCGAGTCGATCCATCACAGTTTCCAACCGAAACTCGCCCGTTTCTCTACCCAAAAAGCCGTGCATGTGTTCGCCGACGACTCACCCCGGTTCCTTCCGGTGCAGTCTACATAAAAAGTCGGGAAGTAGCGGTCACCATCAGGCGTCGTCGGCGTATTCGTCGAGCGGTTTGAACATGCGGAGGTCTGCGATGACGAACTCGCTGGTGAGAATCGGTGGCGTTGAGGGAGACTGGGTCAAGCGAGCGTTGACTGCTTTGATTCGACCGTCTTCACATCAGCTGAGAAGGAGAGCAAATTTCCGACCGCAGCCCAGCCGGCTTTCGGTGATGTCGACGGCCGAAAATCTTCAAAACAAAGATTGA ATGGTGAATTGCAGCAATCGTATGGCCCACCCTATTTTCAAAACTACCCTTCAATTTACAACAAAATTACGATCCACCCACACTCCCCACTCCGATCCCGCCTATAAATTCCACCGTCGAGACGAGCTAAGTTTACCGAAACGAATCCGAAATCCCCATTTACAGAGTGAACGAACAAAAACGCAAAATCAACCCAATCCCATGAAGAAGGAAACAAGCGGGCCTGTTCTCCGGCCATTTCCCGCCGCCGCCCGATTCCACTCTCCGATCTCTTCTCCGGGGACTTCTCCGTTCGCCGCCTCAACTAACTTCGGCTTCTCTTCCGGATCCTCAACCTTTTTCCAAAACCACGACGATCACAACCACCATCGACCCACTTCCCCTACTCGAGTCAATATTTCTTCCACTCCACTGTCTCGCTCTGTTCGATTTTCCATCGATCACCGGTCCGGTTCGCCGAGTCGATCCATCACAGTTTCCAACCGAAACTCGCCCGTTTCTCTACCCAAAAAGCCGTGCATGTGTTCGCCGACGACTCACCCCGGTTCCTTCCGGTGCAGTCTACATAAAAAGTCGGGAAGTAGCGGTCACCATCAGGCGTCGTCGGCGTATTCGTCGAGCGGTTTGAACATGCGGAGGTCTGCGATGACGAACTCGCTGGTGAGAATCGGTGGCGTTGAGGGAGACTGGGTCAAGCGAGCGTTGACTGCTTTGATTCGACCGTCTTCACATCAGCTGAGAAGGAGAGCAAATTTCCGACCGCAGCCCAGCCGGCTTTCGGTGATGTCGACGGCCGAAAATCTTCAAAACAAAGATTGA MVNCSNRMAHPIFKTTLQFTTKLRSTHTPHSDPAYKFHRRDELSLPKRIRNPHLQSERTKTQNQPNPMKKETSGPVLRPFPAAARFHSPISSPGTSPFAASTNFGFSSGSSTFFQNHDDHNHHRPTSPTRVNISSTPLSRSVRFSIDHRSGSPSRSITVSNRNSPVSLPKKPCMCSPTTHPGSFRCSLHKKSGSSGHHQASSAYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPQPSRLSVMSTAENLQNKD Homology
BLAST of CaUC08G153070 vs. NCBI nr
Match: XP_038885670.1 (uncharacterized protein LOC120075978 [Benincasa hispida]) HSP 1 Score: 350.9 bits (899), Expect = 9.9e-93 Identity = 185/206 (89.81%), Postives = 190/206 (92.23%), Query Frame = 0
BLAST of CaUC08G153070 vs. NCBI nr
Match: XP_008445241.1 (PREDICTED: nuclear transcription factor Y subunit gamma-like [Cucumis melo] >KAA0064910.1 nuclear transcription factor Y subunit gamma-like [Cucumis melo var. makuwa]) HSP 1 Score: 327.8 bits (839), Expect = 8.9e-86 Identity = 180/203 (88.67%), Postives = 182/203 (89.66%), Query Frame = 0
BLAST of CaUC08G153070 vs. NCBI nr
Match: XP_004138717.1 (uncharacterized protein LOC101214709 [Cucumis sativus] >KGN62968.1 hypothetical protein Csa_021857 [Cucumis sativus]) HSP 1 Score: 313.5 bits (802), Expect = 1.7e-81 Identity = 174/205 (84.88%), Postives = 178/205 (86.83%), Query Frame = 0
BLAST of CaUC08G153070 vs. NCBI nr
Match: XP_023547160.1 (uncharacterized protein LOC111806049 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 302.0 bits (772), Expect = 5.3e-78 Identity = 164/201 (81.59%), Postives = 174/201 (86.57%), Query Frame = 0
BLAST of CaUC08G153070 vs. NCBI nr
Match: KAG6598561.1 (Protein MEMO1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 301.2 bits (770), Expect = 9.0e-78 Identity = 164/201 (81.59%), Postives = 174/201 (86.57%), Query Frame = 0
BLAST of CaUC08G153070 vs. ExPASy TrEMBL
Match: A0A5A7VCJ2 (Nuclear transcription factor Y subunit gamma-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002280 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 4.3e-86 Identity = 180/203 (88.67%), Postives = 182/203 (89.66%), Query Frame = 0
BLAST of CaUC08G153070 vs. ExPASy TrEMBL
Match: A0A1S3BC71 (nuclear transcription factor Y subunit gamma-like OS=Cucumis melo OX=3656 GN=LOC103488327 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 4.3e-86 Identity = 180/203 (88.67%), Postives = 182/203 (89.66%), Query Frame = 0
BLAST of CaUC08G153070 vs. ExPASy TrEMBL
Match: A0A0A0LME8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382420 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 8.4e-82 Identity = 174/205 (84.88%), Postives = 178/205 (86.83%), Query Frame = 0
BLAST of CaUC08G153070 vs. ExPASy TrEMBL
Match: A0A6J1HGM5 (uncharacterized protein LOC111462780 OS=Cucurbita moschata OX=3662 GN=LOC111462780 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 8.2e-77 Identity = 163/201 (81.09%), Postives = 172/201 (85.57%), Query Frame = 0
BLAST of CaUC08G153070 vs. ExPASy TrEMBL
Match: A0A6J1K7C8 (uncharacterized protein LOC111491813 OS=Cucurbita maxima OX=3661 GN=LOC111491813 PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 4.2e-73 Identity = 157/202 (77.72%), Postives = 168/202 (83.17%), Query Frame = 0
BLAST of CaUC08G153070 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related ) HSP 1 Score: 196.8 bits (499), Expect = 2.2e-50 Identity = 114/188 (60.64%), Postives = 148/188 (78.72%), Query Frame = 0
BLAST of CaUC08G153070 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related ) HSP 1 Score: 196.8 bits (499), Expect = 2.2e-50 Identity = 114/188 (60.64%), Postives = 148/188 (78.72%), Query Frame = 0
BLAST of CaUC08G153070 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related ) HSP 1 Score: 195.3 bits (495), Expect = 6.5e-50 Identity = 115/210 (54.76%), Postives = 155/210 (73.81%), Query Frame = 0
BLAST of CaUC08G153070 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related ) HSP 1 Score: 80.9 bits (198), Expect = 1.8e-15 Identity = 64/168 (38.10%), Postives = 88/168 (52.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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