CaUC08G145840 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G145840
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein STAY-GREEN LIKE, chloroplastic
Location	Ciama_Chr08: 16765480 .. 16768288 (+)
RNA-Seq Expression	CaUC08G145840
Synteny	CaUC08G145840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAGATGTGTGGACTCAGATTTTGGCCCAAACGCGTAGATCTTTGAATCATTGTCCACATGAACCTCATTTCTTCACATCCGAGAGAGACGACAATGGTTGGTTCTGATTCTGAAAGATGAAGGTGAAGAAGAAGACCCATAAGTTGTTATGCTTCTTCCATGGCCTTTCATTGCGTTCGTTACTCTTTTTCACCGTCGCCAGGCAAACCCAACTTCAAATTAGTTCAGAGGAACAACCCTGTTCTTCTCTTTTCTTCTTTCCCTGCCACTCGGGCTTCCTACAACACTCTCGTCTCTGAGGTACCATTTCTTTTCCCCTATCTTTCTTTCGATTTGTTTTTGGTTTCTGTGGTTTATGGCATTGGTGTATTTTGTGTAATTGGAGACTGATTCAAGTTTGGTAGGTTGAAGTTGCAAGTTTGATTGAAGTGATCTTTTTGGGTGAATGAATCTATTCGGTTCTTTTCAATCCGGTGCTTAGAAATTTGCCCCATCTGATTTTGATTTGCATTGTTGTCCTTAGAGTTAAAAGGATTCTGACGTTGAATCTTGGGTTTCATCCAGATTGCTAGTCTACTTCGGCAGAGGAATCTACTTGCCAAGATTTGTGTGTTTCCTGTTGATTAGAGTTCTAAGTTGTACTCTTCCTTCATTGGCTAAAATTCTCAATGATGAACATGAAATGTGTTGCTGGATTTTCAGTAAGCAATGCACATTATAGTACTCCTATAAACAAGCTAAAAAGTTCAGCAGTTAAGTCTCTACTGTGAACTGTAAATCCTGGATAATGTTTACAGAACCCCTGATAATCATCATACCATTTGTTTACTTGGTCACTTCAAATGAAAATTCTTGTTGAATTAAGTTCAGTTTCAAACCTTGCTTTGATGGTTTTTACAATTATTTGAATCAATCATGGGGTTATCTACCTAGGATTTAATATACTATAGGTTTCCATGACACTCAAATATTGTAGGGTTAGGCGGGTTGTCTCGTAAGATTAGTAGAGGTGTGCGTAAGTCGGCCCAAACACTTTCTGATATAAAAAAAAAAAAAAGAAAAAATTGAATCAAAGCATCCAAAAAGCGACAAGGCTTTTGTCTGTTTTTCTGTCAAATTTGTATTACTCTGTCTTATGATGCATTGATCTTTGGGTAGGCTGTTAGGATATTGGTTCCTCCGGCAAGATTTGAAGCTTCAAAGTTAAAAGTAGTATTCAGTAGAGAGGTGAACAAGTCTGCAGGAATCATTCCAAGAACATATATACTATCACACTGCGACTTCACTGCTAATCTCACCTTAACCATCTCTGACGTTATCAACCTTGATCAGGTACAAGTTTATTGCTACTTCACTGTCTGAATGGAACAACACATTGTTTTTTCCTTCTCATTTTTGGGTCTGTGAATGTATATAGTTGAGAGGGTGGTACAACAAGGACGATGTGGTTGCTGAGTGGAAGAAAGTAAAGGATGAAATGTGTCTTCATGTGCATTGCTATGTGAGTGGTCCTAATTCTTTGCTCGACCTTGCTGCAGAGTTTAGATACCACATATTCTCCAAAGAATTGCCTCTTGTAAGTTTATCTTCTATTACCCTGCCTTGAATATGTCATTCCAATGTAACTAGTATCCAAATCGTCTAGACATGGCTTTTCTTTTCATGTTTGATGTGTGTCATGAAATCGACAATCAAAGATAAATAGAAAACATAAACAGTAGAGACTAGACACAAAGATTAAGTAGTTCACTAATAGTTTCTTAGCTATATCCACGGGCAAAGAAAAAATATATTATATATTCAGAGGCGCCAATAGAGTTAGAGAGTTTATATAGCACATTTCTCTAAACCCTAGGGCCAAAATCGTAATTAACGTAATAGCAAAACTCTCGTGCTTGATCATTTGGAGTGCCATATAACAGATTCAAAACATTCCAAAATGGAACATCATCCATCCTCCAAAGTTCCATAAAACAGAAGATATAGAATTTTTCATCATTGTTAAAATTTGTCCACATTCAGTCTTAAAAAAAGTAAGAACTCCTTAGCTGTTGGAGAAATTTCAGATCTGACTTATAATGATGGAAGTGACTTAGGATACCAATGGTTAAGATTGGTATAACTTATAAGGCTAAAAGCCTCTCTTCTTGTGAGACCAGGTACTTGAATCTGTTGTATATGGAGATTCAATTCTGTTTGGGGAGAACCCAGAGCTCCTAGATGCCGTGGTCAGGGTATATTTTCATTCTAGTTCACAAAAGTACAATCGACTCGAGTGCTGGGGGCCACTTAAGGATGCTGTAATGGTAAACTTATTAACATCTTATGAAAGGATCATTGAATACTTGATCTAGACAACTTGATGTCTTCTTTTTTCAATCTTTTCTTTTGCCTGCATTTTTCAGGGGAGGCATCATCATATGCAAGGGCTCCTAAGGGGAAGCAAGGATGTGTCCTCTCCTAAAAAGTTGAGAAGCCCCAAATCAATCTTTCAAGCTCTCTTTGCTTTCCTTCTCTGAACTGCATTGCATAAACTGGTAAATTGGTATAATGCTAATTTTCAAGAAATGGCTGTCTTTTTAAAGTTTCAACATCCATTTAATGCAATTCCTCTGTGGAAGGAGCAAAAGGGTGCACTCTTGTTTTGTTGAATGTATGAGTAACTCTTTGCTAAGGGAGGGAAGTACTTCTGTGGGTCAGTTTATTGTTTGACCAAAAAAAGGCATATTTGTTCTTGCAATTATTGTGTAAATGAGAACAATTCCTTGAAAATTGTTTGGTGGCTAATCTGCTTGCATCTTGTTTCC

mRNA sequence

GGGAGATGTGTGGACTCAGATTTTGGCCCAAACGCGTAGATCTTTGAATCATTGTCCACATGAACCTCATTTCTTCACATCCGAGAGAGACGACAATGGTTGGTTCTGATTCTGAAAGATGAAGGTGAAGAAGAAGACCCATAAGTTGTTATGCTTCTTCCATGGCCTTTCATTGCGTTCGTTACTCTTTTTCACCGTCGCCAGGCAAACCCAACTTCAAATTAGTTCAGAGGAACAACCCTGTTCTTCTCTTTTCTTCTTTCCCTGCCACTCGGGCTTCCTACAACACTCTCGTCTCTGAGGCTGTTAGGATATTGGTTCCTCCGGCAAGATTTGAAGCTTCAAAGTTAAAAGTAGTATTCAGTAGAGAGGTGAACAAGTCTGCAGGAATCATTCCAAGAACATATATACTATCACACTGCGACTTCACTGCTAATCTCACCTTAACCATCTCTGACGTTATCAACCTTGATCAGTTGAGAGGGTGGTACAACAAGGACGATGTGGTTGCTGAGTGGAAGAAAGTAAAGGATGAAATGTGTCTTCATGTGCATTGCTATGTGAGTGGTCCTAATTCTTTGCTCGACCTTGCTGCAGAGTTTAGATACCACATATTCTCCAAAGAATTGCCTCTTGTACTTGAATCTGTTGTATATGGAGATTCAATTCTGTTTGGGGAGAACCCAGAGCTCCTAGATGCCGTGGTCAGGGTATATTTTCATTCTAGTTCACAAAAGTACAATCGACTCGAGTGCTGGGGGCCACTTAAGGATGCTGTAATGGGGAGGCATCATCATATGCAAGGGCTCCTAAGGGGAAGCAAGGATGTGTCCTCTCCTAAAAAGTTGAGAAGCCCCAAATCAATCTTTCAAGCTCTCTTTGCTTTCCTTCTCTGAACTGCATTGCATAAACTGGTAAATTGGTATAATGCTAATTTTCAAGAAATGGCTGTCTTTTTAAAGTTTCAACATCCATTTAATGCAATTCCTCTGTGGAAGGAGCAAAAGGGTGCACTCTTGTTTTGTTGAATGTATGAGTAACTCTTTGCTAAGGGAGGGAAGTACTTCTGTGGGTCAGTTTATTGTTTGACCAAAAAAAGGCATATTTGTTCTTGCAATTATTGTGTAAATGAGAACAATTCCTTGAAAATTGTTTGGTGGCTAATCTGCTTGCATCTTGTTTCC

Coding sequence (CDS)

ATGGCCTTTCATTGCGTTCGTTACTCTTTTTCACCGTCGCCAGGCAAACCCAACTTCAAATTAGTTCAGAGGAACAACCCTGTTCTTCTCTTTTCTTCTTTCCCTGCCACTCGGGCTTCCTACAACACTCTCGTCTCTGAGGCTGTTAGGATATTGGTTCCTCCGGCAAGATTTGAAGCTTCAAAGTTAAAAGTAGTATTCAGTAGAGAGGTGAACAAGTCTGCAGGAATCATTCCAAGAACATATATACTATCACACTGCGACTTCACTGCTAATCTCACCTTAACCATCTCTGACGTTATCAACCTTGATCAGTTGAGAGGGTGGTACAACAAGGACGATGTGGTTGCTGAGTGGAAGAAAGTAAAGGATGAAATGTGTCTTCATGTGCATTGCTATGTGAGTGGTCCTAATTCTTTGCTCGACCTTGCTGCAGAGTTTAGATACCACATATTCTCCAAAGAATTGCCTCTTGTACTTGAATCTGTTGTATATGGAGATTCAATTCTGTTTGGGGAGAACCCAGAGCTCCTAGATGCCGTGGTCAGGGTATATTTTCATTCTAGTTCACAAAAGTACAATCGACTCGAGTGCTGGGGGCCACTTAAGGATGCTGTAATGGGGAGGCATCATCATATGCAAGGGCTCCTAAGGGGAAGCAAGGATGTGTCCTCTCCTAAAAAGTTGAGAAGCCCCAAATCAATCTTTCAAGCTCTCTTTGCTTTCCTTCTCTGA

Protein sequence

MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPATRASYNTLVSEAVRILVPPARFEASKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGDSILFGENPELLDAVVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSKDVSSPKKLRSPKSIFQALFAFLL

Homology

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BLAST of CaUC08G145840 vs. NCBI nr
Match: XP_038884235.1 (magnesium dechelatase SGRL, chloroplastic [Benincasa hispida])

HSP 1 Score: 490.7 bits (1262), Expect = 7.2e-135
Identity = 237/244 (97.13%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPATRASYNTLVSEAVRILVPPARFEA 60
           MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFP TRASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPTTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLD+AAEFRYHIFSKELPLVLESV+YGDSILFGENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180

Query: 181 VVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSKDVSSPKKLRSPKSIFQALF 240
           +VRVYFHSSS KYNRLECWGPLKDAV+GRHHH+QGLLRGSKDVSSPKKLRSPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHVQGLLRGSKDVSSPKKLRSPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

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BLAST of CaUC08G145840 vs. NCBI nr
Match: XP_022141380.1 (protein STAY-GREEN LIKE, chloroplastic [Momordica charantia])

HSP 1 Score: 471.5 bits (1212), Expect = 4.5e-129
Identity = 226/244 (92.62%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPATRASYNTLVSEAVRILVPPARFEA 60
           MAFHC RYSFSPSPGKP FKLV R+NP +LFSS   TRASY+TLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPGKPKFKLVHRSNPAVLFSSLRTTRASYSTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVV +RE+NKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVLTRELNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESV+YGDS+LFGENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSVLFGENPELLDA 180

Query: 181 VVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSKDVSSPKKLRSPKSIFQALF 240
           +VRVYFHSSSQKYNRLECWGPLKDAV+GRHHHMQGLLRGSKD+SSPKKLRSPKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDMSSPKKLRSPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

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BLAST of CaUC08G145840 vs. NCBI nr
Match: XP_004144252.1 (magnesium dechelatase SGRL, chloroplastic [Cucumis sativus] >KGN47507.1 hypothetical protein Csa_019065 [Cucumis sativus])

HSP 1 Score: 467.6 bits (1202), Expect = 6.5e-128
Identity = 227/244 (93.03%), Postives = 233/244 (95.49%), Query Frame = 0


Query: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPATRASYNTLVSEAVRILVPPARFEA 60
           MA HCVRYSFSPSP KPNFKLVQRNNP LLFSSF  T ASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MALHCVRYSFSPSPAKPNFKLVQRNNPALLFSSFSTTPASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVVFSREV KSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGP+SLLD+AAEFRYHIFSKELPLVLESV+YGDSILFGENPELLD+
Sbjct: 121 KVKDEMCLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS 180

Query: 181 VVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSKDVSSPKKLRSPKSIFQALF 240
           +VRVYFHSSS KYNRLECWGPLKDAV+GRHHHMQGLL GSKDVS  KKLRSPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLSGSKDVSPSKKLRSPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of CaUC08G145840 vs. NCBI nr
Match: XP_022989801.1 (protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 457.6 bits (1176), Expect = 6.7e-125
Identity = 222/244 (90.98%), Postives = 229/244 (93.85%), Query Frame = 0


Query: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPATRASYNTLVSEAVRILVPPARFEA 60
           MAFHC RYSFSPSP KP FKLV  N PV+LFSS  +TRASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPVVLFSSLRSTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKV F+REVNK AGI PRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDL AEFRYHIFSKELPLVLESV+YGDSILF ENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFRENPELLDA 180

Query: 181 VVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSKDVSSPKKLRSPKSIFQALF 240
           +VRVYFHSSSQKYNRLECWGPLKDAV GRHHHMQGLLR S+DVSSPKKLR+PKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKKLRTPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of CaUC08G145840 vs. NCBI nr
Match: XP_022960677.1 (protein STAY-GREEN LIKE, chloroplastic [Cucurbita moschata] >XP_023546959.1 protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6602142.1 Magnesium dechelatase SGRL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032831.1 Protein STAY-GREEN LIKE, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124
Identity = 221/244 (90.57%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPATRASYNTLVSEAVRILVPPARFEA 60
           MAFHC RYSFSPSP KP FKLV  N P +LFSS  +TRASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPAVLFSSLRSTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKV F+REVNK AGI PRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDL AEFRYHIFSKELPLVLESV+YGDSILF ENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFRENPELLDA 180

Query: 181 VVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSKDVSSPKKLRSPKSIFQALF 240
           +VRVYFHSSSQKYNRLECWGPLKDAV GRHHHMQGLLR S+DVSSPKKLR+PKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKKLRTPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of CaUC08G145840 vs. ExPASy Swiss-Prot
Match: Q94AQ9 (Magnesium dechelatase SGRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGRL PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 5.1e-75
Identity = 156/263 (59.32%), Postives = 183/263 (69.58%), Query Frame = 0


Query: 1   MAFHCVRYSFSPSPGKPNFKLVQR---------NNPVLLFSSFPATRA------SYNTLV 60
           MA + V Y   P    PN ++            NN +    S P + A      SYNTLV
Sbjct: 1   MACYIVPYYHHPVLSHPNREIFSHRHHHHHRFCNNLLNRRISVPRSSAISDGGVSYNTLV 60

Query: 61  SEAVRILVPPARFEASKLKVVFSREV--NKSAG--IIPRTYILSHCDFTANLTLTISDVI 120
           SEAVR+LVP A F++SKLKV F  E+  NKS G  I PRTYILSHCDFTANLTLTIS+VI
Sbjct: 61  SEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTISNVI 120

Query: 121 NLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLE 180
           NLDQL GWY KDDVVAEWKKV DE+ LH+HC VSG + L D+AAE RYHIFSKELPLVL+
Sbjct: 121 NLDQLEGWYKKDDVVAEWKKVNDELRLHIHCCVSGMSLLQDVAAELRYHIFSKELPLVLK 180

Query: 181 SVVYGDSILFGENPELLDAVVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSK 240
           +VV+GDS++F ENPEL+DA V VYFHSS+ KYNR+ECWGPLKDA  G+    QG  +G  
Sbjct: 181 AVVHGDSVMFRENPELMDAYVWVYFHSSTPKYNRIECWGPLKDAAKGK---QQGNHQGFL 240

Query: 241 DVSSPKKLRSPKSIFQALFAFLL 245
             ++ +KL   KSIF  LF FLL
Sbjct: 241 SSTTSRKLIRHKSIFHTLFTFLL 260

[Close]

BLAST of CaUC08G145840 vs. ExPASy Swiss-Prot
Match: Q0J8Q3 (Protein STAY-GREEN LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0692600 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-48
Identity = 106/208 (50.96%), Postives = 134/208 (64.42%), Query Frame = 0


Query: 46  SEAVRILVPPARFEASKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQ 105
           S A ++L PP  F+A KL V F+     S+   PR Y L+HCDFTANLTL +SD I  D+
Sbjct: 54  SLAAKLLGPPTSFDAGKLTVEFAHSHGNSSSGFPRAYTLTHCDFTANLTLAVSDTIAADR 113

Query: 106 LRGWYNKDDVVAEWKKVKDE--MCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESV 165
                  DDV AEWK+ + +  M LHVHC+VSG N L  LAA FRY++FSKELPLVL++V
Sbjct: 114 R---LRADDVFAEWKQQQQQEGMALHVHCFVSGANLLHGLAAGFRYYVFSKELPLVLKAV 173

Query: 166 VYGDSILFGENPELLDAVVRVYFHSSSQ-KYNRLECWGPLKDAVMGRHHHMQGLLRGSKD 225
           V+GD++LF E PELL+A V V+FHSSS  KYNRLECWGPL++A      H +  L    +
Sbjct: 174 VHGDALLFAEQPELLEAKVWVHFHSSSNAKYNRLECWGPLREAANAETTHKRHALEQLHN 233

Query: 226 VSSP------KKLRSPKSIFQALFAFLL 245
             +       +K  SP +IF AL A LL
Sbjct: 234 AITKGTRRRRRKWSSPDAIFSALLALLL 258

[Close]

BLAST of CaUC08G145840 vs. ExPASy Swiss-Prot
Match: A2Z3E5 (Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=SGR PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.0e-46
Identity = 93/160 (58.13%), Postives = 117/160 (73.12%), Query Frame = 0


Query: 52  LVPPARFEASKLKVVF---SREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 111
           L  PA FEASKLKV+F     E ++  G +PRTY L+H D TA LTL +S  IN  QL+G
Sbjct: 51  LFGPAIFEASKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSHTINRAQLQG 110

Query: 112 WYNK---DDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVY 171
           WYNK   D+VVAEWKKV+  M LHVHC++SG + LLDL A  RY+IF KELP+VL++ V+
Sbjct: 111 WYNKLQRDEVVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKELPVVLKAFVH 170

Query: 172 GDSILFGENPELLDAVVRVYFHSSSQKYNRLECWGPLKDA 206
           GD  LF  +PEL +A V VYFHS+  ++NR+ECWGPL+DA
Sbjct: 171 GDGNLFSRHPELEEATVWVYFHSNLPRFNRVECWGPLRDA 210

[Close]

BLAST of CaUC08G145840 vs. ExPASy Swiss-Prot
Match: Q652K1 (Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SGR PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.0e-46
Identity = 93/160 (58.13%), Postives = 117/160 (73.12%), Query Frame = 0


Query: 52  LVPPARFEASKLKVVF---SREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 111
           L  PA FEASKLKV+F     E ++  G +PRTY L+H D TA LTL +S  IN  QL+G
Sbjct: 51  LFGPAIFEASKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSHTINRAQLQG 110

Query: 112 WYNK---DDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVY 171
           WYNK   D+VVAEWKKV+  M LHVHC++SG + LLDL A  RY+IF KELP+VL++ V+
Sbjct: 111 WYNKLQRDEVVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKELPVVLKAFVH 170

Query: 172 GDSILFGENPELLDAVVRVYFHSSSQKYNRLECWGPLKDA 206
           GD  LF  +PEL +A V VYFHS+  ++NR+ECWGPL+DA
Sbjct: 171 GDGNLFSRHPELEEATVWVYFHSNLPRFNRVECWGPLRDA 210

[Close]

BLAST of CaUC08G145840 vs. ExPASy Swiss-Prot
Match: A9YF60 (Protein STAY-GREEN homolog, chloroplastic OS=Capsicum annuum OX=4072 GN=SGR PE=1 SV=2)

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-46
Identity = 101/204 (49.51%), Postives = 130/204 (63.73%), Query Frame = 0


Query: 34  FPATRASYNTLVSEAVRILVPPARFEASKLKVVF-SREVNKSAGIIPRTYILSHCDFTAN 93
           +   R S+       V  L  PA FEASKLKV+F   +  K  G +PRTY L+H D T+ 
Sbjct: 25  YKTRRKSHKNQSIVPVARLFGPAIFEASKLKVLFLGVDEKKHPGKLPRTYTLTHSDITSK 84

Query: 94  LTLTISDVINLDQLRGWYN---KDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRY 153
           LTL IS  IN  QL+GWYN   +D+VVAEWKKVK +M LHVHC++SG + +LDL A  RY
Sbjct: 85  LTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFMLDLFARLRY 144

Query: 154 HIFSKELPLVLESVVYGDSILFGENPELLDAVVRVYFHSSSQKYNRLECWGPLKDAVMGR 213
           +IF KELP+VL++ V+GD  L    PEL  A+V VYFHS+ Q++N++ECWGPLKDA    
Sbjct: 145 YIFCKELPVVLKAFVHGDENLLKNYPELQQALVWVYFHSNIQEFNKVECWGPLKDAASPS 204

Query: 214 HHHMQGLLRGSKDVSSPKKLRSPK 234
              + G +  S   +S  K   PK
Sbjct: 205 SSGVGGGMNTSFTSNSNIKWILPK 228

[Close]

BLAST of CaUC08G145840 vs. ExPASy TrEMBL
Match: A0A6J1CHX2 (protein STAY-GREEN LIKE, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011794 PE=3 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.2e-129
Identity = 226/244 (92.62%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPATRASYNTLVSEAVRILVPPARFEA 60
           MAFHC RYSFSPSPGKP FKLV R+NP +LFSS   TRASY+TLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPGKPKFKLVHRSNPAVLFSSLRTTRASYSTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVV +RE+NKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVLTRELNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESV+YGDS+LFGENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSVLFGENPELLDA 180

Query: 181 VVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSKDVSSPKKLRSPKSIFQALF 240
           +VRVYFHSSSQKYNRLECWGPLKDAV+GRHHHMQGLLRGSKD+SSPKKLRSPKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDMSSPKKLRSPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of CaUC08G145840 vs. ExPASy TrEMBL
Match: A0A0A0KGP2 (Staygreen domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G349840 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.1e-128
Identity = 227/244 (93.03%), Postives = 233/244 (95.49%), Query Frame = 0


Query: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPATRASYNTLVSEAVRILVPPARFEA 60
           MA HCVRYSFSPSP KPNFKLVQRNNP LLFSSF  T ASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MALHCVRYSFSPSPAKPNFKLVQRNNPALLFSSFSTTPASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVVFSREV KSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGP+SLLD+AAEFRYHIFSKELPLVLESV+YGDSILFGENPELLD+
Sbjct: 121 KVKDEMCLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDS 180

Query: 181 VVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSKDVSSPKKLRSPKSIFQALF 240
           +VRVYFHSSS KYNRLECWGPLKDAV+GRHHHMQGLL GSKDVS  KKLRSPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLSGSKDVSPSKKLRSPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of CaUC08G145840 vs. ExPASy TrEMBL
Match: A0A6J1JL65 (protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486879 PE=3 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.2e-125
Identity = 222/244 (90.98%), Postives = 229/244 (93.85%), Query Frame = 0


Query: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPATRASYNTLVSEAVRILVPPARFEA 60
           MAFHC RYSFSPSP KP FKLV  N PV+LFSS  +TRASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPVVLFSSLRSTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKV F+REVNK AGI PRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDL AEFRYHIFSKELPLVLESV+YGDSILF ENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFRENPELLDA 180

Query: 181 VVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSKDVSSPKKLRSPKSIFQALF 240
           +VRVYFHSSSQKYNRLECWGPLKDAV GRHHHMQGLLR S+DVSSPKKLR+PKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKKLRTPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of CaUC08G145840 vs. ExPASy TrEMBL
Match: A0A6J1H833 (protein STAY-GREEN LIKE, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111461394 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 9.5e-125
Identity = 221/244 (90.57%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPATRASYNTLVSEAVRILVPPARFEA 60
           MAFHC RYSFSPSP KP FKLV  N P +LFSS  +TRASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPAVLFSSLRSTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKV F+REVNK AGI PRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDL AEFRYHIFSKELPLVLESV+YGDSILF ENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFRENPELLDA 180

Query: 181 VVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSKDVSSPKKLRSPKSIFQALF 240
           +VRVYFHSSSQKYNRLECWGPLKDAV GRHHHMQGLLR S+DVSSPKKLR+PKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKKLRTPKSIFQALF 240

Query: 241 AFLL 245
           AFLL
Sbjct: 241 AFLL 244

[Close]

BLAST of CaUC08G145840 vs. ExPASy TrEMBL
Match: A0A6J1JU75 (protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111489764 PE=3 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.8e-121
Identity = 215/244 (88.11%), Postives = 224/244 (91.80%), Query Frame = 0


Query: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPATRASYNTLVSEAVRILVPPARFEA 60
           MAF C  YS  PSP KP F+ V R  PV+LF SF  T+ASYNTLVSEAVRILVPPARFEA
Sbjct: 62  MAFQCASYSVLPSPTKPKFEFVVRKKPVVLFFSFRTTQASYNTLVSEAVRILVPPARFEA 121

Query: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKV FSREV K AGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 122 SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 181

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGDSILFGENPELLDA 180
           KVKDEMCLH+HCYVSGPNSLLDLAAEFRYHIFSKELPLVLESV+YGDSILFGENPELLDA
Sbjct: 182 KVKDEMCLHIHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 241

Query: 181 VVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSKDVSSPKKLRSPKSIFQALF 240
           +VRVYFHSSS KYNRLECWGPLKDAV+GRHHHMQGLLRGSKDV SPKKL SPKSIFQALF
Sbjct: 242 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 301

Query: 241 AFLL 245
           AF++
Sbjct: 302 AFII 305

[Close]

BLAST of CaUC08G145840 vs. TAIR 10
Match: AT1G44000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 282.3 bits (721), Expect = 3.6e-76
Identity = 156/263 (59.32%), Postives = 183/263 (69.58%), Query Frame = 0


Query: 1   MAFHCVRYSFSPSPGKPNFKLVQR---------NNPVLLFSSFPATRA------SYNTLV 60
           MA + V Y   P    PN ++            NN +    S P + A      SYNTLV
Sbjct: 1   MACYIVPYYHHPVLSHPNREIFSHRHHHHHRFCNNLLNRRISVPRSSAISDGGVSYNTLV 60

Query: 61  SEAVRILVPPARFEASKLKVVFSREV--NKSAG--IIPRTYILSHCDFTANLTLTISDVI 120
           SEAVR+LVP A F++SKLKV F  E+  NKS G  I PRTYILSHCDFTANLTLTIS+VI
Sbjct: 61  SEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTISNVI 120

Query: 121 NLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLE 180
           NLDQL GWY KDDVVAEWKKV DE+ LH+HC VSG + L D+AAE RYHIFSKELPLVL+
Sbjct: 121 NLDQLEGWYKKDDVVAEWKKVNDELRLHIHCCVSGMSLLQDVAAELRYHIFSKELPLVLK 180

Query: 181 SVVYGDSILFGENPELLDAVVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGLLRGSK 240
           +VV+GDS++F ENPEL+DA V VYFHSS+ KYNR+ECWGPLKDA  G+    QG  +G  
Sbjct: 181 AVVHGDSVMFRENPELMDAYVWVYFHSSTPKYNRIECWGPLKDAAKGK---QQGNHQGFL 240

Query: 241 DVSSPKKLRSPKSIFQALFAFLL 245
             ++ +KL   KSIF  LF FLL
Sbjct: 241 SSTTSRKLIRHKSIFHTLFTFLL 260

[Close]

BLAST of CaUC08G145840 vs. TAIR 10
Match: AT4G22920.1 (non-yellowing 1 )

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-45
Identity = 92/169 (54.44%), Postives = 118/169 (69.82%), Query Frame = 0


Query: 52  LVPPARFEASKLKVVF-SREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWY 111
           L  PA FE+SKLKV+F   +  K    +PRTY L+H D TA LTL IS  IN  QL+GW 
Sbjct: 51  LFGPAIFESSKLKVLFLGVDEKKHPSTLPRTYTLTHSDITAKLTLAISQSINNSQLQGWA 110

Query: 112 N---KDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGD 171
           N   +D+VVAEWKKVK +M LHVHC++SG + LLDL A+FRY IF KELP+VL++ V+GD
Sbjct: 111 NRLYRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDLFAKFRYFIFCKELPVVLKAFVHGD 170

Query: 172 SILFGENPELLDAVVRVYFHSSSQKYNRLECWGPLKDAVMGRHHHMQGL 217
             L    PEL +A+V VYFHS+  ++N++ECWGPL +AV    H  + L
Sbjct: 171 GNLLNNYPELQEALVWVYFHSNVNEFNKVECWGPLWEAVSPDGHKTETL 219

[Close]

BLAST of CaUC08G145840 vs. TAIR 10
Match: AT4G11910.1 (INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: non-yellowing 1 (TAIR:AT4G22920.1); Has 206 Blast hits to 202 proteins in 67 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 177.9 bits (450), Expect = 9.6e-45
Identity = 90/165 (54.55%), Postives = 115/165 (69.70%), Query Frame = 0


Query: 52  LVPPARFEASKLKVVF-SREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWY 111
           L  PA FEASKLKV+F   +  K    +PRTY L+H D TA LTL IS  IN  QL+GW 
Sbjct: 47  LFGPAIFEASKLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGWA 106

Query: 112 NK---DDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGD 171
           NK   D+VV EWKKVK +M LHVHC++SG +  L+L A+ RY+IF KELP+VLE+  +GD
Sbjct: 107 NKLFRDEVVGEWKKVKGKMSLHVHCHISGGHFFLNLIAKLRYYIFCKELPVVLEAFAHGD 166

Query: 172 SILFGENPELLDAVVRVYFHSSSQKYNRLECWGPLKDAVMGRHHH 213
             L   +PEL ++ V VYFHS+  +YN++ECWGPL +A M +H H
Sbjct: 167 EYLLNNHPELQESPVWVYFHSNIPEYNKVECWGPLWEA-MSQHQH 210

[Close]

BLAST of CaUC08G145840 vs. TAIR 10
Match: AT4G11911.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 167.9 bits (424), Expect = 9.9e-42
Identity = 96/200 (48.00%), Postives = 122/200 (61.00%), Query Frame = 0


Query: 12  PSPGKPNFKLVQRNNPVLLFSSFPATRASYNTLVSE--AVRILVPPARFEASKLKVVF-S 71
           P+  KP+F   +R+      SS P+T  S          V  L   A FEASKL V F  
Sbjct: 11  PANLKPDFSDKERS------SSIPSTTRSSKRKKQSMFPVARLFGQAIFEASKLNVKFLG 70

Query: 72  REVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYN---KDDVVAEWKKVKDE 131
            +  K    +PRTY  +H D TA LTL IS  IN  QL+GW N   +D+VVAEW+KVK  
Sbjct: 71  VDEKKHPPNLPRTYTFTHSDITAKLTLAISHSINNSQLQGWANRLYRDEVVAEWRKVKSN 130

Query: 132 MCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVVYGDSILFGENPELLDAVVRVY 191
           M LHVHC++SG + LLDL AE RY IF KELP+VL++ V+GD  +    PEL +A V VY
Sbjct: 131 MSLHVHCHISGDHFLLDLIAELRYFIFCKELPMVLKAFVHGDENMLNNYPELHEAFVWVY 190

Query: 192 FHSSSQKYNRLECWGPLKDA 206
           FHS+  K+N++ECWG L +A
Sbjct: 191 FHSNIPKFNKVECWGRLCEA 204

The following BLAST results are available for this feature:

BLAST of CaUC08G145840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884235.1	7.2e-135	97.13	magnesium dechelatase SGRL, chloroplastic [Benincasa hispida]	[more]
XP_022141380.1	4.5e-129	92.62	protein STAY-GREEN LIKE, chloroplastic [Momordica charantia]	[more]
XP_004144252.1	6.5e-128	93.03	magnesium dechelatase SGRL, chloroplastic [Cucumis sativus] >KGN47507.1 hypothet...	[more]
XP_022989801.1	6.7e-125	90.98	protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita maxima]	[more]
XP_022960677.1	2.0e-124	90.57	protein STAY-GREEN LIKE, chloroplastic [Cucurbita moschata] >XP_023546959.1 prot...	[more]

BLAST of CaUC08G145840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AQ9	5.1e-75	59.32	Magnesium dechelatase SGRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGR...	[more]
Q0J8Q3	1.8e-48	50.96	Protein STAY-GREEN LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
A2Z3E5	1.0e-46	58.13	Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=SGR ...	[more]
Q652K1	1.0e-46	58.13	Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SG...	[more]
A9YF60	1.7e-46	49.51	Protein STAY-GREEN homolog, chloroplastic OS=Capsicum annuum OX=4072 GN=SGR PE=1...	[more]

BLAST of CaUC08G145840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHX2	2.2e-129	92.62	protein STAY-GREEN LIKE, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0KGP2	3.1e-128	93.03	Staygreen domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G349840 P...	[more]
A0A6J1JL65	3.2e-125	90.98	protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H833	9.5e-125	90.57	protein STAY-GREEN LIKE, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1JU75	2.8e-121	88.11	protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CaUC08G145840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44000.1	3.6e-76	59.32	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G22920.1	1.5e-45	54.44	non-yellowing 1	[more]
AT4G11910.1	9.6e-45	54.55	INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidops...	[more]
AT4G11911.1	9.9e-42	48.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024438	Staygreen protein	PFAM	PF12638	Staygreen	coord: 57..205 e-value: 2.7E-60 score: 202.5
None	No IPR available	PANTHER	PTHR31750	PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED	coord: 22..244
None	No IPR available	PANTHER	PTHR31750:SF18	PROTEIN STAY-GREEN LIKE, CHLOROPLASTIC	coord: 22..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G145840.1	CaUC08G145840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0016021	integral component of membrane