CaUC08G143100 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTAGACAGTGTGCGACATCGGCAGCGACGAGCAGGTGTGCGACGGCGGCAGCTACGAGCAGGTCTACAACGGCGGCAGCGACAAACAAGTGTGCAACAACGGCAGTGGACGTCCCTAGAGGTGGTAGCGTCTGGTGCGGCAATGGTGATAAAAAAAATTAGGGGGAGATTGAGAAGGGAAGAGAAAACAAAAAAATAGGGGGGTGTTTTAAAGGGAAATTAAAAAGATGGGGGAAATAAAATAAAAAATGTGAGAAAAATAAAGTGGGGGGAGGATTTTAAGAAAGTGTGGGAAAAACTAAAATGTGGGATTTAAGTAATTTTTACCCACAAATTTTAACTTCCCTCCTTTTCTCAAATTAAATTTGAAATATTAAAAAATATTAATGACTATTAAAATTTGTCAATTTTTAATGATGGTTAATTGTAGTCATAATTTGGTGGTGCAAAAAAAAATGTCAAAATAGTAAAAAAAAAATCCGAAAATTCACGTCTTTTCCTGCCAAAACCGTATTTTTCATTTCCTTACATTTAATGACTGTTTTTTCTCTTTCTCCTATATTTCTGCTACTGTACAAGAGTCATGAAAGGTGAAATGTAGTGTCTAAATGAATGGCAACAAGGTCAAACACTAACTTCACTAGAGGAGTTTTTCAACATGAAACATTCTTCTACAAGGAATGTAATTGAAAGGGACTTTGGTCTTCTTAAAGGAAGATGACTATTCTTAGATCAAAGTCATACTATCCCGTCAAAGTTTAGTGTAGAATAATAACAGCCTGTTGTTTGCTCCACAACTTAATTAGAAGAAAAAATGCCCATTAATCCAATAGAAGATGAGTTGGTTCATAACACTTTGAGTGAACCTGAATTAGATCCCATCACTTATGTGGAAACATCGAATGAGTGGAATGCTTGGCGAGATAACTTAGCACAAGAGATGTAAGATGAATGGAGATATAGAATGTATTTAGTGACTGTTTTACAATATAATGAACACCCTACTACTTAAATTTTTAGGCATGTATAGTTTTCCATAATTCATTAGTTTAGATTTCTTAATCAGTTGTTTCGATTGTTAAGTATAATTTTTATAACCAAATGTATTAAAATGTTATTATTGTTTTTTTTTCCTTATGTTATTTATTTTTATATAAAGTTGATCACATGCTTATGTTGTATTCTATATCTTGTTATCAATATATACCTTTGTAATAGTGTTGATACTTTGTTTAGTTGTTAATTTCGAATTCAAACCATGTGATAGATATGGAAGAAAATGATTAATATAGATGGAGTTCAAACAAAAAACATGTTTGGACTAAAGAAAAGGATGGCAAGTTGATCGAGTGTTTAATGGAGTTAGCAAATCTAAGCCAATGACATTGCGATTATGGAACATTTAGATTAGGCTATCTACAAAAAGTGGAGCAAATGATGAAGTTAAAGTTACTAGATGTGAGGTGAAGGTTCAACCTCACATAGAATCAAGAGTAAAACTTTTGAAGAAACAATGTAATGCAATTGCAGAAATGTTGGGACCAAATTGTAGTGGTTTTGGTTGGAACGAAAGAAAGAAGTGTATTGATTGTTCGAAATATGTCTTTGATGATTGATTGGGTTAAGGTATGACAATTATAATTTTTATTACATTCAATAATATACTTTTTGTAATTAATATAACATTACATAATTTTGTTGCAAGGTCACTCAAGTGCAAAGGATTGCTAACAAGTCATTCTCATACTTAGATGAAATGACAATAATATTTGGCAAAGACCGAGCTAACGGCCTAGAGCTGAAGCATCAGAAGATATGGTTGAGACAATAGATATGGAGACAAAAGCAATGGGATGTGGGATAACTTTACTAATTGTTATGTGCTACGCCCACCTGAACAGGTAAATAGGCCCCAAACAGGAGTCGATGAGGTTGATTCTATGTCCATGGATGAACTTGATTCAAGTATTCCAACTCAGTCTGAAACTTCTCGAAAATTATTAAAGAAAAAGGTAAAGAATGAAGATAAATTAGTTGAAATTGTGACTACATCTTTGAATAACATGGGTGCAATGTATGAGAAAACAACTGAGAACATTGGTAAGATAGCCAAGTATTTTGAAACTCAAATTGTTGTTTCTAAAAGGAGAACTCATATATTTATTGAGGTAGTAGAAATGCTCAAAGAGTTGGGGTAGGTGCACTTCTAGCAAAAGATCATGATTAGACCGATTATTTCTTTACGTTGCCACATTATAGGAGGGAATTTATATTACAGCTATTGGCAGGATAAAGTTAGTCAATTGAAAAATATGTGATAGACATGTTTATTTTGTGTCAAGAAGGATCTTCAATTTTTGTGTTTTATTTGTAGAAAGAACTATTGAGATTCAATTTTTTTTTTTTTTTCTCAGCCAGTCTTAGTTATTATTTGAAGAATTAGAAGAATAAAAATGTTTCAAACTTTACTATTTCTTTTGTTTGCACGTGGATAAGAGATATAAAGGAAAATTATTTTATGAAATGAAATAATTTTATTTAAGTTGTATCATAGTTTTTTTAAAATTTCTGTTTAGAAAGATACACAAATACAAATACAAATTCAAATTAATATTTATTTTATAAAATAAAATATTAAATTAATAAAGATAAATCCGTTGAGAAAAATAATATATAAAACAAGTTTAAATCAATAAAAAAAATAAATAAATATGTTACATAAGTTCAAATTATATTAAATTAATGAGAAAATTACATGAATAATCGTATGGACATTATTGAAAAATTATGTAAATTTAAGACATTTTCCATGTGCAAATCGTGCAAAACAAATAAGGTTATCAATTATTTTAAAGTATTTGTAAAATATATTCCTATAAAACAAATATGATTATCTAAAGATGTCAGACATTTACAATTACAATCTATACTTTTAGATATCTAAAGATTTTATCAACATTCCAAAAAAAAAAACATAAAAGGCCCCTAAATGTTTGAGAGTAAAATTGAAACATCGCACAAGTTAATCCAATCCAAGTTGTAGGCATCTTATATAATTTAGCTTAAAATAAACTCTTTATGTCTAAACAAAATCCCTCAAATATCATTTTGGGGCTTAAATTGCCTATTCCATCCCCATACTTCCACGTGTCCACTTTTATCTAATTCAAATAAAGGCATTTTGCACCACAGCAATAAGATAAGCCTTGAATTTTCGACCGTTGATCTCTTATTTCCTTTCAATCCAAGCCGTCCATCTCCACCACATAATCCTTAAGCCTTTCTTTAGGTTTCAATTTACCACAGAAAAACTTCTCAAATCCCCAGAACTCAAAGAGAACTCAAATTCCTCACCGGAGCCATCAATGGCCGCCCTTCACCAAACCGCCGCCTCTCTCCAGGCCAAGCTCCTTCCAACCGTCCGATTCTCCCGAACCACTCCCGTAAACCTCTCCTTCTCCGCCACTTTTCCTTCCCGCGGACTCCGCCTCAGCCACCACCGCTCTCACGGCGGCGCTAAAATGTCCGCCACAGCCGCTGGAAGCTACGCCGCAGCGCTGGCCGAAGTCGCTTCCTCGAATAACACGCTGGAAGCCACAAGCGGCGACGTGGAGAAGATTGAGAGCTTGTTCGCGGATCCGCAGGTGCTCAATTTCTTCGCGAACCCAACGATTAGCATCGAGAAGAAACTGGCAGTGGTGGATGAAATCGCTTCGTCCTCATCTCTACAGCCGCATTCAGCGAATTTCTTGAAGATCCTGGTGGACGCGAAGAGGATCGACATCCTGAAGGAGATCGTGACGGAGTTTGAATTGGTGTACAACAAGATTACGAACACGGAGCTTGCGGTGGTGAGTTCGGTTGTGCAGTTGGAGCAGCAGCATTTGGCGCAGATCGCGAAGCAGGTGCAGAAATTGAGCGGAGCGAAGAATGTGAGGATAAAGACGCAGATCGATCCGAGTCTGGTGGCTGGATTCACAGTCAGGTTTGGGAATTCTGGATCGAAACTTATTGATTTGAGCGTCAAGAAACAGCTTGAGGAAATTGCTGCTCAGCTTGATCTTGGCAATATTCAACTGGCTGTATGA ATGGAGGTAGACAGTGTGCGACATCGGCAGCGACGAGCAGGTGTGCGACGGCGGCAGCTACGAGCAGGTCTACAACGGCGGCAGCGACAAACAAGTGTGCAACAACGGCAGTGGACGTCCCTAGAGGTGGTAGCGTCTGGTGCGGCAATGGTAAATAGGCCCCAAACAGGAGTCGATGAGGTTGATTCTATGTCCATGGATGAACTTGATTCAAGTATTCCAACTCAGTCTGAAACTTCTCGAAAATTATTAAAGAAAAAGGTAAAGAATGAAGATAAATTAGTTGAAATTGTGACTACATCTTTGAATAACATGGGTGCAATGTATGAGAAAACAACTGAGAACATTGAAAAACTTCTCAAATCCCCAGAACTCAAAGAGAACTCAAATTCCTCACCGGAGCCATCAATGGCCGCCCTTCACCAAACCGCCGCCTCTCTCCAGGCCAAGCTCCTTCCAACCGTCCGATTCTCCCGAACCACTCCCGTAAACCTCTCCTTCTCCGCCACTTTTCCTTCCCGCGGACTCCGCCTCAGCCACCACCGCTCTCACGGCGGCGCTAAAATGTCCGCCACAGCCGCTGGAAGCTACGCCGCAGCGCTGGCCGAAGTCGCTTCCTCGAATAACACGCTGGAAGCCACAAGCGGCGACGTGGAGAAGATTGAGAGCTTGTTCGCGGATCCGCAGGTGCTCAATTTCTTCGCGAACCCAACGATTAGCATCGAGAAGAAACTGGCAGTGGTGGATGAAATCGCTTCGTCCTCATCTCTACAGCCGCATTCAGCGAATTTCTTGAAGATCCTGGTGGACGCGAAGAGGATCGACATCCTGAAGGAGATCGTGACGGAGTTTGAATTGGTGTACAACAAGATTACGAACACGGAGCTTGCGGTGGTGAGTTCGGTTGTGCAGTTGGAGCAGCAGCATTTGGCGCAGATCGCGAAGCAGGTGCAGAAATTGAGCGGAGCGAAGAATGTGAGGATAAAGACGCAGATCGATCCGAGTCTGGTGGCTGGATTCACAGTCAGGTTTGGGAATTCTGGATCGAAACTTATTGATTTGAGCGTCAAGAAACAGCTTGAGGAAATTGCTGCTCAGCTTGATCTTGGCAATATTCAACTGGCTGTATGA ATGGAGGTAGACAGTGTGCGACATCGGCAGCGACGAGCAGGTGTGCGACGGCGGCAGCTACGAGCAGGTCTACAACGGCGGCAGCGACAAACAAGTGTGCAACAACGGCAGTGGACGTCCCTAGAGGTGGTAGCGTCTGGTGCGGCAATGGTAAATAGGCCCCAAACAGGAGTCGATGAGGTTGATTCTATGTCCATGGATGAACTTGATTCAAGTATTCCAACTCAGTCTGAAACTTCTCGAAAATTATTAAAGAAAAAGGTAAAGAATGAAGATAAATTAGTTGAAATTGTGACTACATCTTTGAATAACATGGGTGCAATGTATGAGAAAACAACTGAGAACATTGAAAAACTTCTCAAATCCCCAGAACTCAAAGAGAACTCAAATTCCTCACCGGAGCCATCAATGGCCGCCCTTCACCAAACCGCCGCCTCTCTCCAGGCCAAGCTCCTTCCAACCGTCCGATTCTCCCGAACCACTCCCGTAAACCTCTCCTTCTCCGCCACTTTTCCTTCCCGCGGACTCCGCCTCAGCCACCACCGCTCTCACGGCGGCGCTAAAATGTCCGCCACAGCCGCTGGAAGCTACGCCGCAGCGCTGGCCGAAGTCGCTTCCTCGAATAACACGCTGGAAGCCACAAGCGGCGACGTGGAGAAGATTGAGAGCTTGTTCGCGGATCCGCAGGTGCTCAATTTCTTCGCGAACCCAACGATTAGCATCGAGAAGAAACTGGCAGTGGTGGATGAAATCGCTTCGTCCTCATCTCTACAGCCGCATTCAGCGAATTTCTTGAAGATCCTGGTGGACGCGAAGAGGATCGACATCCTGAAGGAGATCGTGACGGAGTTTGAATTGGTGTACAACAAGATTACGAACACGGAGCTTGCGGTGGTGAGTTCGGTTGTGCAGTTGGAGCAGCAGCATTTGGCGCAGATCGCGAAGCAGGTGCAGAAATTGAGCGGAGCGAAGAATGTGAGGATAAAGACGCAGATCGATCCGAGTCTGGTGGCTGGATTCACAGTCAGGTTTGGGAATTCTGGATCGAAACTTATTGATTTGAGCGTCAAGAAACAGCTTGAGGAAATTGCTGCTCAGCTTGATCTTGGCAATATTCAACTGGCTGTATGA MEVDSVRHRQRRAGVRRRQLRAGLQRRQRQTSVQQRQWTSLEVVASGAAMVNRPQTGVDEVDSMSMDELDSSIPTQSETSRKLLKKKVKNEDKLVEIVTTSLNNMGAMYEKTTENIEKLLKSPELKENSNSSPEPSMAALHQTAASLQAKLLPTVRFSRTTPVNLSFSATFPSRGLRLSHHRSHGGAKMSATAAGSYAAALAEVASSNNTLEATSGDVEKIESLFADPQVLNFFANPTISIEKKLAVVDEIASSSSLQPHSANFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV Homology
BLAST of CaUC08G143100 vs. NCBI nr
Match: XP_008463069.1 (PREDICTED: ATP synthase subunit delta, chloroplastic [Cucumis melo] >KAA0034975.1 ATP synthase subunit delta [Cucumis melo var. makuwa] >TYK02317.1 ATP synthase subunit delta [Cucumis melo var. makuwa]) HSP 1 Score: 415.2 bits (1066), Expect = 5.9e-112 Identity = 227/240 (94.58%), Postives = 234/240 (97.50%), Query Frame = 0
BLAST of CaUC08G143100 vs. NCBI nr
Match: XP_038884002.1 (ATP synthase subunit delta, chloroplastic [Benincasa hispida]) HSP 1 Score: 411.8 bits (1057), Expect = 6.5e-111 Identity = 224/240 (93.33%), Postives = 232/240 (96.67%), Query Frame = 0
BLAST of CaUC08G143100 vs. NCBI nr
Match: XP_004138373.1 (ATP synthase subunit delta, chloroplastic [Cucumis sativus] >KGN45880.1 hypothetical protein Csa_004890 [Cucumis sativus]) HSP 1 Score: 406.8 bits (1044), Expect = 2.1e-109 Identity = 223/240 (92.92%), Postives = 231/240 (96.25%), Query Frame = 0
BLAST of CaUC08G143100 vs. NCBI nr
Match: XP_023534996.1 (ATP synthase subunit delta, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 393.7 bits (1010), Expect = 1.8e-105 Identity = 216/240 (90.00%), Postives = 229/240 (95.42%), Query Frame = 0
BLAST of CaUC08G143100 vs. NCBI nr
Match: XP_022973506.1 (ATP synthase subunit delta, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 391.3 bits (1004), Expect = 9.1e-105 Identity = 215/240 (89.58%), Postives = 227/240 (94.58%), Query Frame = 0
BLAST of CaUC08G143100 vs. ExPASy Swiss-Prot
Match: Q9SSS9 (ATP synthase subunit delta, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATPD PE=1 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 5.2e-71 Identity = 152/240 (63.33%), Postives = 193/240 (80.42%), Query Frame = 0
BLAST of CaUC08G143100 vs. ExPASy Swiss-Prot
Match: P32980 (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPD PE=2 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 2.1e-67 Identity = 148/248 (59.68%), Postives = 185/248 (74.60%), Query Frame = 0
BLAST of CaUC08G143100 vs. ExPASy Swiss-Prot
Match: Q02758 (ATP synthase delta chain, chloroplastic OS=Pisum sativum OX=3888 GN=ATPD PE=1 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.2e-64 Identity = 144/252 (57.14%), Postives = 191/252 (75.79%), Query Frame = 0
BLAST of CaUC08G143100 vs. ExPASy Swiss-Prot
Match: P11402 (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPD PE=1 SV=2) HSP 1 Score: 231.1 bits (588), Expect = 2.1e-59 Identity = 137/249 (55.02%), Postives = 180/249 (72.29%), Query Frame = 0
BLAST of CaUC08G143100 vs. ExPASy Swiss-Prot
Match: Q07300 (ATP synthase delta chain, chloroplastic OS=Sorghum bicolor OX=4558 GN=ATPD PE=2 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.0e-50 Identity = 122/247 (49.39%), Postives = 163/247 (65.99%), Query Frame = 0
BLAST of CaUC08G143100 vs. ExPASy TrEMBL
Match: A0A5A7T0I4 (ATP synthase subunit delta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00020 PE=3 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 2.8e-112 Identity = 227/240 (94.58%), Postives = 234/240 (97.50%), Query Frame = 0
BLAST of CaUC08G143100 vs. ExPASy TrEMBL
Match: A0A1S3CIB5 (ATP synthase subunit delta, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501306 PE=3 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 2.8e-112 Identity = 227/240 (94.58%), Postives = 234/240 (97.50%), Query Frame = 0
BLAST of CaUC08G143100 vs. ExPASy TrEMBL
Match: A0A0A0K7Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016970 PE=3 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 1.0e-109 Identity = 223/240 (92.92%), Postives = 231/240 (96.25%), Query Frame = 0
BLAST of CaUC08G143100 vs. ExPASy TrEMBL
Match: A0A6J1I8U4 (ATP synthase subunit delta, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111472044 PE=3 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 4.4e-105 Identity = 215/240 (89.58%), Postives = 227/240 (94.58%), Query Frame = 0
BLAST of CaUC08G143100 vs. ExPASy TrEMBL
Match: A0A6J1EC71 (ATP synthase subunit delta, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111432727 PE=3 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 2.2e-104 Identity = 215/240 (89.58%), Postives = 227/240 (94.58%), Query Frame = 0
BLAST of CaUC08G143100 vs. TAIR 10
Match: AT4G09650.1 (ATP synthase delta-subunit gene ) HSP 1 Score: 269.6 bits (688), Expect = 3.7e-72 Identity = 152/240 (63.33%), Postives = 193/240 (80.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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