CaUC08G142840 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G142840
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	E3 ubiquitin-protein ligase RNF126-like
Location	Ciama_Chr08: 4737547 .. 4738221 (+)
RNA-Seq Expression	CaUC08G142840
Synteny	CaUC08G142840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCTCTATTGCTTCATCCCTCGAATATAGTTTTCGCAGCACTCCAAACAGCGATCAAATCCTGGAAGTTCGATTTGGGCATTGCAGCCGCCTGATTTCTCGATCTTCCTCTCCCGGAATCATTCCAGACCAAATACTGCAACATATTCCCTCAACTCTAATGGGGGAGGCTCTGTTTCCTTTCTCTAATTTGAGGCATCCTCGACAACATCAAGGAATGGAGATTTTAGTGACTGAGTTTCTGCGTTCCTTCAACCTCCATTCCTCTGTTTGTCAAATCATGTGTCGAAAGATTCTATCCTTTGCCCGACAGTTTGACGGGAGCTTCAAAATAGAAGCGAAGATCGATTACATGGAGGACTTGATCTGGAATATGGAGGTTGTCCCTGAGCTATTATACCCAATTTCTATTATTTCTGAAGAAGCTGGAGCAGGGGCGCCGGAGTCGGTAATTGAGAGATTAAGGAAGCAGAAATTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATGGAAGAGTGTTGTGTTTGTTGCGAAGATCTAAAAGGGAAGGGTATGGAAGTGAGTAGGATTCCGTGCGGTCATGTATATCACAAATCATGCATCCTCACTTGGCTTCAAATCAACAACTCTTGTCCATTGTGTAGATCACCATTACAGCCATGA

mRNA sequence

ATGTCTTTCTCTATTGCTTCATCCCTCGAATATAGTTTTCGCAGCACTCCAAACAGCGATCAAATCCTGGAAGTTCGATTTGGGCATTGCAGCCGCCTGATTTCTCGATCTTCCTCTCCCGGAATCATTCCAGACCAAATACTGCAACATATTCCCTCAACTCTAATGGGGGAGGCTCTGTTTCCTTTCTCTAATTTGAGGCATCCTCGACAACATCAAGGAATGGAGATTTTAGTGACTGAGTTTCTGCGTTCCTTCAACCTCCATTCCTCTGTTTGTCAAATCATGTGTCGAAAGATTCTATCCTTTGCCCGACAGTTTGACGGGAGCTTCAAAATAGAAGCGAAGATCGATTACATGGAGGACTTGATCTGGAATATGGAGGTTGTCCCTGAGCTATTATACCCAATTTCTATTATTTCTGAAGAAGCTGGAGCAGGGGCGCCGGAGTCGGTAATTGAGAGATTAAGGAAGCAGAAATTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATGGAAGAGTGTTGTGTTTGTTGCGAAGATCTAAAAGGGAAGGGTATGGAAGTGAGTAGGATTCCGTGCGGTCATGTATATCACAAATCATGCATCCTCACTTGGCTTCAAATCAACAACTCTTGTCCATTGTGTAGATCACCATTACAGCCATGA

Coding sequence (CDS)

ATGTCTTTCTCTATTGCTTCATCCCTCGAATATAGTTTTCGCAGCACTCCAAACAGCGATCAAATCCTGGAAGTTCGATTTGGGCATTGCAGCCGCCTGATTTCTCGATCTTCCTCTCCCGGAATCATTCCAGACCAAATACTGCAACATATTCCCTCAACTCTAATGGGGGAGGCTCTGTTTCCTTTCTCTAATTTGAGGCATCCTCGACAACATCAAGGAATGGAGATTTTAGTGACTGAGTTTCTGCGTTCCTTCAACCTCCATTCCTCTGTTTGTCAAATCATGTGTCGAAAGATTCTATCCTTTGCCCGACAGTTTGACGGGAGCTTCAAAATAGAAGCGAAGATCGATTACATGGAGGACTTGATCTGGAATATGGAGGTTGTCCCTGAGCTATTATACCCAATTTCTATTATTTCTGAAGAAGCTGGAGCAGGGGCGCCGGAGTCGGTAATTGAGAGATTAAGGAAGCAGAAATTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATGGAAGAGTGTTGTGTTTGTTGCGAAGATCTAAAAGGGAAGGGTATGGAAGTGAGTAGGATTCCGTGCGGTCATGTATATCACAAATCATGCATCCTCACTTGGCTTCAAATCAACAACTCTTGTCCATTGTGTAGATCACCATTACAGCCATGA

Protein sequence

MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDGSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEEEEEEEEEEEEMEECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQP

Homology

[Close]

BLAST of CaUC08G142840 vs. NCBI nr
Match: XP_038876917.1 (E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida])

HSP 1 Score: 278.5 bits (711), Expect = 5.1e-71
Identity = 155/239 (64.85%), Postives = 176/239 (73.64%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL 60
           MSFS  SS+ Y F  TPNSDQ+L+VRFG CSRLISRS SPGIIPD+ILQ   ST +GEAL
Sbjct: 1   MSFSTTSSIAYYFHGTPNSDQVLQVRFGVCSRLISRSPSPGIIPDRILQQTRSTPIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFD---GSFKIEAKI 120
           FPF+N+R   +   +E LV  FLRSFNLHSSVCQ+M RKILSFA+QFD   GSFKIEA I
Sbjct: 61  FPFTNVRDVGEEAAVEFLVNGFLRSFNLHSSVCQMMSRKILSFAQQFDANNGSFKIEANI 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEEA-------------GAGAPESVIERLRKQKFEEE 180
           DYM++  W ME V   L+P SII EE               AGAPES IER+RKQKF   
Sbjct: 121 DYMKE-FW-MEAV-SWLHPNSIIGEEGFEINFEEGPPPARRAGAPESAIERVRKQKF--- 180

Query: 181 EEEEEEEEEMEECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQ 224
            +  +EEEE  ECCVCCEDLK KGMEVSRIPCGHVYHKSCILTWL+ +N+CPLCR  L+
Sbjct: 181 -DGFKEEEETGECCVCCEDLKRKGMEVSRIPCGHVYHKSCILTWLERSNTCPLCRRSLE 232

[Close]

BLAST of CaUC08G142840 vs. NCBI nr
Match: XP_008457277.1 (PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0033274.1 RING finger protein 165-like [Cucumis melo var. makuwa] >TYK14831.1 RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 2.8e-61
Identity = 138/229 (60.26%), Postives = 166/229 (72.49%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL 60
           MSFS  S LE SF   PN+DQ L VRFG CSRLIS+S SP IIPD IL+  P TL+GEAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDGS---FKIEAKI 120
           F  SNLR P Q Q ++ LV EFL SFNL SSVC+I+   ILSFA+QFD +    KIEA +
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQKFEEEEEEEEEEEEME 180
           D++++  W  E  PE L PIS + EE  +  GA ES IER++KQK   +   EEEEEE+ 
Sbjct: 121 DHIKE-YWT-EAPPE-LNPISTVGEEGLSPRGASESAIERVKKQKL--DWFSEEEEEEIG 180

Query: 181 ECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQP 225
           +CCVCCE++K KG EV RIPCGHVYHKSCIL WL+I+NSCPLCR+ L+P
Sbjct: 181 DCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of CaUC08G142840 vs. NCBI nr
Match: XP_004139003.1 (E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN61460.1 hypothetical protein Csa_005955 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 5.3e-60
Identity = 133/229 (58.08%), Postives = 164/229 (71.62%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL 60
           MSFS  S ++ SF   PN+DQ L VR   CSRLIS+S +P I+PD IL+  P TL+GEAL
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFD---GSFKIEAKI 120
           F  SNL++P Q Q +E +V EFLRSFNL SSVC+I+   ILSFA+QFD     FKIE  +
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEEA--GAGAPESVIERLRKQKFEEEEEEEEEEEEME 180
           DY+++  W  E  PE LYPIS + EE     GA ES IER++KQKF  +    EEEEE+ 
Sbjct: 121 DYIKE-YWT-EAAPE-LYPISTVGEEGLPPRGASESAIERVKKQKF--DGFRGEEEEEIG 180

Query: 181 ECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQP 225
           +C VCCE++K KG EV RIPCGHVYHKSCIL WL+I+NSCPLCR+ L+P
Sbjct: 181 DCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of CaUC08G142840 vs. NCBI nr
Match: KAA0043526.1 (RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 236.1 bits (601), Expect = 2.9e-58
Identity = 135/229 (58.95%), Postives = 156/229 (68.12%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL 60
           MS S +SS + SF +TPN+D  L  RFG+ SRL        II DQILQ  PS LMGE L
Sbjct: 95  MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRL--------IIVDQILQQTPSILMGETL 154

Query: 61  FPFSNLRHPRQHQGMEILVTEFLRSFNLHS--SVCQIMCRKILSFARQF---DGSFKIEA 120
            PFSNL HP Q Q +E LV EFL SFNLHS  S  + +CRKILSFA QF    GSFKIEA
Sbjct: 155 IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 214

Query: 121 KIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEEEEEEEEEEEEME 180
            ++++EDLI   +   E   P          GAPES IERLRK+KF    +   +EEE+ 
Sbjct: 215 NVEHVEDLIIGEQGFQETPSP------PRTTGAPESAIERLRKEKF----DVLNKEEEIG 274

Query: 181 ECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQP 225
           +C VC E+LKG+G EVSRIPCGHVYHKSCILTWLQINNSCPLCR+PLQP
Sbjct: 275 DCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQP 305

[Close]

BLAST of CaUC08G142840 vs. NCBI nr
Match: XP_008442291.1 (PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0041218.1 RING finger protein 165-like protein [Cucumis melo var. makuwa] >TYK16021.1 RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-44
Identity = 106/172 (61.63%), Postives = 125/172 (72.67%), Query Frame = 0


Query: 56  MGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDG---SFK 115
           MG+ L PFSNLRHPRQ Q ++ LV +FL SFNLHSSV + +C +ILSFA QF     SFK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 116 IEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERL-RKQKFEEEEEEEEEE 175
           IEA ID++EDLI   +   E   P +        GAPES IERL  KQKF  +   +EEE
Sbjct: 61  IEANIDHVEDLIIGEQGFQETPPPRT-------RGAPESAIERLIMKQKF--DGFNKEEE 120

Query: 176 EEMEECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQ 224
           EE+ +C VC E+LKGKG EVSRIPCGHVYHKSC+LTWLQINNSCPLCR+PL+
Sbjct: 121 EEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 163

[Close]

BLAST of CaUC08G142840 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 173 EMEECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPL 223
           E  +C VC +D + +G E  ++PC H+YHK C+L WL+++NSCP+CR  L
Sbjct: 220 EFNQCAVCMDDFE-EGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHEL 268

[Close]

BLAST of CaUC08G142840 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 23/52 (44.23%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 171 EEEMEECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPL 223
           + EM +C VC ++ +  G +V ++PC HV+H+ C+L WL+++NSCP+CR  L
Sbjct: 210 KSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of CaUC08G142840 vs. ExPASy Swiss-Prot
Match: Q9C1X4 (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP32A8.03c PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.9e-08
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 144 AGAGAPESVIERLRKQKFEEEEEEEEEEEEMEECCVCCEDLKGKGMEVSRIPCGHVYHKS 203
           A A APE VI +++ QK  +E  +EE      EC +C E  K    +V ++PC H +H++
Sbjct: 368 APAPAPEDVIAKMKVQKPPKELIDEE-----GECTICMEMFKIND-DVIQLPCKHYFHEN 427

Query: 204 CILTWLQINNSCPLCRSPLQP 225
           CI  WL++N +C +CR+P+ P
Sbjct: 428 CIKPWLRVNGTCAICRAPVDP 442

[Close]

BLAST of CaUC08G142840 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.4e-08
Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 172 EEMEECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPL 223
           EE+  C VC +DL+  G +  ++PC H +H SCIL WL++++SCP+CR  L
Sbjct: 194 EEVVSCSVCLDDLE-VGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFEL 243

[Close]

BLAST of CaUC08G142840 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.2e-07
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 0


Query: 171 EEEMEECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQP 225
           E  +EEC VC  + +          CGHV+H  CI TW +  +SCPLCR+P+QP
Sbjct: 107 ESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQP 160

[Close]

BLAST of CaUC08G142840 vs. ExPASy TrEMBL
Match: A0A5D3CSM6 (RING finger protein 165-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00260 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.4e-61
Identity = 138/229 (60.26%), Postives = 166/229 (72.49%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL 60
           MSFS  S LE SF   PN+DQ L VRFG CSRLIS+S SP IIPD IL+  P TL+GEAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDGS---FKIEAKI 120
           F  SNLR P Q Q ++ LV EFL SFNL SSVC+I+   ILSFA+QFD +    KIEA +
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQKFEEEEEEEEEEEEME 180
           D++++  W  E  PE L PIS + EE  +  GA ES IER++KQK   +   EEEEEE+ 
Sbjct: 121 DHIKE-YWT-EAPPE-LNPISTVGEEGLSPRGASESAIERVKKQKL--DWFSEEEEEEIG 180

Query: 181 ECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQP 225
           +CCVCCE++K KG EV RIPCGHVYHKSCIL WL+I+NSCPLCR+ L+P
Sbjct: 181 DCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of CaUC08G142840 vs. ExPASy TrEMBL
Match: A0A1S3C5T8 (RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103497006 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.4e-61
Identity = 138/229 (60.26%), Postives = 166/229 (72.49%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL 60
           MSFS  S LE SF   PN+DQ L VRFG CSRLIS+S SP IIPD IL+  P TL+GEAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDGS---FKIEAKI 120
           F  SNLR P Q Q ++ LV EFL SFNL SSVC+I+   ILSFA+QFD +    KIEA +
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQKFEEEEEEEEEEEEME 180
           D++++  W  E  PE L PIS + EE  +  GA ES IER++KQK   +   EEEEEE+ 
Sbjct: 121 DHIKE-YWT-EAPPE-LNPISTVGEEGLSPRGASESAIERVKKQKL--DWFSEEEEEEIG 180

Query: 181 ECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQP 225
           +CCVCCE++K KG EV RIPCGHVYHKSCIL WL+I+NSCPLCR+ L+P
Sbjct: 181 DCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of CaUC08G142840 vs. ExPASy TrEMBL
Match: A0A0A0LHS2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.6e-60
Identity = 133/229 (58.08%), Postives = 164/229 (71.62%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL 60
           MSFS  S ++ SF   PN+DQ L VR   CSRLIS+S +P I+PD IL+  P TL+GEAL
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFD---GSFKIEAKI 120
           F  SNL++P Q Q +E +V EFLRSFNL SSVC+I+   ILSFA+QFD     FKIE  +
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEEA--GAGAPESVIERLRKQKFEEEEEEEEEEEEME 180
           DY+++  W  E  PE LYPIS + EE     GA ES IER++KQKF  +    EEEEE+ 
Sbjct: 121 DYIKE-YWT-EAAPE-LYPISTVGEEGLPPRGASESAIERVKKQKF--DGFRGEEEEEIG 180

Query: 181 ECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQP 225
           +C VCCE++K KG EV RIPCGHVYHKSCIL WL+I+NSCPLCR+ L+P
Sbjct: 181 DCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of CaUC08G142840 vs. ExPASy TrEMBL
Match: A0A5A7TNB0 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00200 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.4e-58
Identity = 135/229 (58.95%), Postives = 156/229 (68.12%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMGEAL 60
           MS S +SS + SF +TPN+D  L  RFG+ SRL        II DQILQ  PS LMGE L
Sbjct: 95  MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRL--------IIVDQILQQTPSILMGETL 154

Query: 61  FPFSNLRHPRQHQGMEILVTEFLRSFNLHS--SVCQIMCRKILSFARQF---DGSFKIEA 120
            PFSNL HP Q Q +E LV EFL SFNLHS  S  + +CRKILSFA QF    GSFKIEA
Sbjct: 155 IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 214

Query: 121 KIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEEEEEEEEEEEEME 180
            ++++EDLI   +   E   P          GAPES IERLRK+KF    +   +EEE+ 
Sbjct: 215 NVEHVEDLIIGEQGFQETPSP------PRTTGAPESAIERLRKEKF----DVLNKEEEIG 274

Query: 181 ECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQP 225
           +C VC E+LKG+G EVSRIPCGHVYHKSCILTWLQINNSCPLCR+PLQP
Sbjct: 275 DCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQP 305

[Close]

BLAST of CaUC08G142840 vs. ExPASy TrEMBL
Match: A0A5D3CVT7 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00140 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 5.2e-45
Identity = 106/172 (61.63%), Postives = 125/172 (72.67%), Query Frame = 0


Query: 56  MGEALFPFSNLRHPRQHQGMEILVTEFLRSFNLHSSVCQIMCRKILSFARQFDG---SFK 115
           MG+ L PFSNLRHPRQ Q ++ LV +FL SFNLHSSV + +C +ILSFA QF     SFK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 116 IEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERL-RKQKFEEEEEEEEEE 175
           IEA ID++EDLI   +   E   P +        GAPES IERL  KQKF  +   +EEE
Sbjct: 61  IEANIDHVEDLIIGEQGFQETPPPRT-------RGAPESAIERLIMKQKF--DGFNKEEE 120

Query: 176 EEMEECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQ 224
           EE+ +C VC E+LKGKG EVSRIPCGHVYHKSC+LTWLQINNSCPLCR+PL+
Sbjct: 121 EEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 163

[Close]

BLAST of CaUC08G142840 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-10
Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 173 EMEECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPL 223
           +M +C VC E+    G + + +PC H+YHK CI+ WL++NNSCP+CR  L
Sbjct: 220 DMSQCTVCMEEFI-VGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDL 268

[Close]

BLAST of CaUC08G142840 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 9.2e-10
Identity = 23/52 (44.23%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 171 EEEMEECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPL 223
           + EM +C VC ++ +  G +V ++PC HV+H+ C+L WL+++NSCP+CR  L
Sbjct: 210 KSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of CaUC08G142840 vs. TAIR 10
Match: AT5G60820.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-09
Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 0


Query: 118 DYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEEEEEEEEEEEEMEEC 177
           DY ED +   E   E+L+   I S      A +S I+ L+      E+  E +++ +  C
Sbjct: 317 DY-EDYLHTTEY--EMLFEAEISSGIGKPPASKSFIKNLKVSPLSNEDVMENDDDAV--C 376

Query: 178 CVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPL 223
           C  C++    G EV+ +PC H YH  CI+ WL I N+CP+CR  L
Sbjct: 377 CAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFEL 416

[Close]

BLAST of CaUC08G142840 vs. TAIR 10
Match: AT1G45180.1 (RING/U-box superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-08
Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 150 ESVIERLRKQKFEEEEEEEEEEEEMEECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWL 209
           E++  RL++QK+   +      +E+E CCVC E+ K +  E+ R+ CGH +H  CI  WL
Sbjct: 568 ETISNRLKQQKY---KSSTRSSQEVEPCCVCQEEYK-EEEEIGRLECGHDFHSQCIKEWL 627

Query: 210 QINNSCPLCRS 221
           +  N CP+C++
Sbjct: 628 KQKNLCPICKT 634

[Close]

BLAST of CaUC08G142840 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-08
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 0


Query: 171 EEEMEECCVCCEDLKGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQP 225
           E  +EEC VC  + +          CGHV+H  CI TW +  +SCPLCR+P+QP
Sbjct: 107 ESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQP 160

The following BLAST results are available for this feature:

BLAST of CaUC08G142840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876917.1	5.1e-71	64.85	E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ub...	[more]
XP_008457277.1	2.8e-61	60.26	PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0033274.1 RING finger...	[more]
XP_004139003.1	5.3e-60	58.08	E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN61460.1 hypothetical pro...	[more]
KAA0043526.1	2.9e-58	58.95	RING finger protein 165-like protein [Cucumis melo var. makuwa]	[more]
XP_008442291.1	1.1e-44	61.63	PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0041218.1 RING finger...	[more]

BLAST of CaUC08G142840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CH30	1.5e-09	48.00	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	1.3e-08	44.23	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9C1X4	2.9e-08	39.51	Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (stra...	[more]
Q6AVN2	6.4e-08	47.06	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
Q9LZJ6	3.2e-07	44.44	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]

BLAST of CaUC08G142840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSM6	1.4e-61	60.26	RING finger protein 165-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C5T8	1.4e-61	60.26	RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103497006 PE=4 SV=1	[more]
A0A0A0LHS2	2.6e-60	58.08	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 P...	[more]
A0A5A7TNB0	1.4e-58	58.95	RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3CVT7	5.2e-45	61.63	RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of CaUC08G142840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60360.1	4.1e-10	48.00	RING/U-box superfamily protein	[more]
AT3G19950.1	9.2e-10	44.23	RING/U-box superfamily protein	[more]
AT5G60820.1	2.7e-09	35.24	RING/U-box superfamily protein	[more]
AT1G45180.1	1.7e-08	38.03	RING/U-box superfamily protein	[more]
AT3G62690.1	2.3e-08	44.44	AtL5	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 153..176
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 59..223
None	No IPR available	PANTHER	PTHR45931:SF9	E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKE	coord: 59..223
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 153..222
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 177..218 e-value: 4.7E-6 score: 36.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 176..219 e-value: 3.0E-11 score: 43.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 177..219 score: 12.681067
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 139..224 e-value: 6.4E-20 score: 72.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G142840.1	CaUC08G142840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity