CaUC08G142280 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTAGATATGTAAACAAGCGGTAGGAAAAACTACGAGCATCTGTGGGGTGAGTTTGAGGATAGTAAACTTGTGGAGTCACTAACAGAGCTTGTACAAAATGGAGGTTGGCGAGCTGATAATGGTACATTTAGGCCTGGTTATTTGCAACAATTGGAAAAGATGATGAGTGAGAAAATTCCAGGTTGCAACCTAAAAGCAACCCCACACCTTGAGTCTAGAATAAAGGTCCTAAAGAGGCAATGCAATGCAATAGCTAAACTGTTGGGTCCAACATGTAGTGGATTTTGTTGGAATGAAGAGGTAAAGAGTGTCGATGTTGAACAGAATATTTATGATGAGTGGGTAAAGGTAAGGATGTGTTTGCAAAATATTAAATAAAAATCATGCTTATATGTAATAATTATATATTTTCTATAATTAACATCCAAAGTCACCCTAATGCAAAAGGGTTACGAAGGAAAGTCTTCGTCCATTTTGAGGAGCTAGCAGTAATATTTGGAAAAGATCGGACTATCAGAGAAGGTGTGGAGACACCTACTGATATGACATTCGATATGAATGAGACAGAGTAGAACATGCAATTACAATTGGATGAGTTTGAAATCCCAAATGTAGTACTCGGGAAAATATGTTGGGGGATGAGACACCAACCATACCTACGAGTAGGATCAATGGAGTAGGATCATTCTCTAGAGGGAGTAAGAGGAAGCAATCTAGCCCAATAAATTCTGTTGATATGGTGAAATTTATGAGTATGCAAACCATTGAGCTTCAAAGAATTTCTCCTTAGCATAAGGATGAGAAAGAGGTGGAGGCCCTTCGACGACAAGCACTTGACAAACTTCAGGAGATGCATGATCTGAATAGTAATGATCGTGTTAAGGTAGCTGAGGCTTTGTTCAAAGATGTTTATAAGATCGATTTGTTCCTAGCTGCACCAGATTATAATTGA ATGGATGTAGATATTCACCCTAATGCAAAAGGGTTACGAAGGAAAGTCTTCGTCCATTTTGAGGAGCTAGCAGTAATATTTGGAAAAGATCGGACTATCAGAGAAGGTGTGGAGACACCTACTGATATGACATTCGATATGAATGAGACAGATACTCGGGAAAATATGTTGGGGGATGAGACACCAACCATACCTACGAGTAGGATCAATGGAGTAGGATCATTCTCTAGAGGGAGTAAGAGGAAGCAATCTAGCCCAATAAATTCTGTTGATATGCATAAGGATGAGAAAGAGGTGGAGGCCCTTCGACGACAAGCACTTGACAAACTTCAGGAGATGCATGATCTGAATAGTAATGATCGTGTTAAGGTAGCTGAGGCTTTGTTCAAAGATGTTTATAAGATCGATTTGTTCCTAGCTGCACCAGATTATAATTGA ATGGATGTAGATATTCACCCTAATGCAAAAGGGTTACGAAGGAAAGTCTTCGTCCATTTTGAGGAGCTAGCAGTAATATTTGGAAAAGATCGGACTATCAGAGAAGGTGTGGAGACACCTACTGATATGACATTCGATATGAATGAGACAGATACTCGGGAAAATATGTTGGGGGATGAGACACCAACCATACCTACGAGTAGGATCAATGGAGTAGGATCATTCTCTAGAGGGAGTAAGAGGAAGCAATCTAGCCCAATAAATTCTGTTGATATGCATAAGGATGAGAAAGAGGTGGAGGCCCTTCGACGACAAGCACTTGACAAACTTCAGGAGATGCATGATCTGAATAGTAATGATCGTGTTAAGGTAGCTGAGGCTTTGTTCAAAGATGTTTATAAGATCGATTTGTTCCTAGCTGCACCAGATTATAATTGA MDVDIHPNAKGLRRKVFVHFEELAVIFGKDRTIREGVETPTDMTFDMNETDTRENMLGDETPTIPTSRINGVGSFSRGSKRKQSSPINSVDMHKDEKEVEALRRQALDKLQEMHDLNSNDRVKVAEALFKDVYKIDLFLAAPDYN Homology
BLAST of CaUC08G142280 vs. NCBI nr
Match: XP_038887234.1 (uncharacterized protein LOC120077425 [Benincasa hispida]) HSP 1 Score: 68.9 bits (167), Expect = 4.0e-08 Identity = 45/156 (28.85%), Postives = 78/156 (50.00%), Query Frame = 0
BLAST of CaUC08G142280 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia]) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-06 Identity = 52/180 (28.89%), Postives = 83/180 (46.11%), Query Frame = 0
BLAST of CaUC08G142280 vs. NCBI nr
Match: VVA26458.1 (PREDICTED: At2g29880 [Prunus dulcis]) HSP 1 Score: 62.0 bits (149), Expect = 4.9e-06 Identity = 47/152 (30.92%), Postives = 70/152 (46.05%), Query Frame = 0
BLAST of CaUC08G142280 vs. NCBI nr
Match: KAG6468192.1 (hypothetical protein ZIOFF_072763 [Zingiber officinale]) HSP 1 Score: 61.2 bits (147), Expect = 8.3e-06 Identity = 47/158 (29.75%), Postives = 77/158 (48.73%), Query Frame = 0
BLAST of CaUC08G142280 vs. NCBI nr
Match: XP_038877524.1 (uncharacterized protein LOC120069782 [Benincasa hispida]) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-05 Identity = 37/104 (35.58%), Postives = 52/104 (50.00%), Query Frame = 0
BLAST of CaUC08G142280 vs. ExPASy TrEMBL
Match: A0A5E4FL81 (PREDICTED: At2g29880 OS=Prunus dulcis OX=3755 GN=ALMOND_2B024138 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.4e-06 Identity = 47/152 (30.92%), Postives = 70/152 (46.05%), Query Frame = 0
BLAST of CaUC08G142280 vs. ExPASy TrEMBL
Match: A0A6P5U2X6 (uncharacterized protein At2g29880-like OS=Prunus avium OX=42229 GN=LOC110773273 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 9.0e-06 Identity = 51/168 (30.36%), Postives = 77/168 (45.83%), Query Frame = 0
BLAST of CaUC08G142280 vs. ExPASy TrEMBL
Match: A0A2P6PUC3 (Putative Myb/SANT-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0284621 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 4.5e-05 Identity = 48/167 (28.74%), Postives = 76/167 (45.51%), Query Frame = 0
BLAST of CaUC08G142280 vs. ExPASy TrEMBL
Match: A0A2P6PRT6 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0274461 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 4.5e-05 Identity = 48/167 (28.74%), Postives = 76/167 (45.51%), Query Frame = 0
BLAST of CaUC08G142280 vs. ExPASy TrEMBL
Match: A0A2P6QKN4 (Putative Myb/SANT-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0072391 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 7.6e-05 Identity = 45/168 (26.79%), Postives = 74/168 (44.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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