Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATTTTAAGTTGGAATGCTTGTGGATTGGGGAATCCAAGAGCATTCCAAGCTTTGGTAGCCTTATTAAAGGCAAGATCTCCCCAAGCGTTCTTTTTATCTGAAACAAAAAGCGGCAAGGAAGTGGCTAGTAGAGTGAAGATTTTAGGAAGTTTTCACGGTTGTTTGTCAGTTGATAGTGAAAGATCTAGAGGAGGGTTATACCTTCTGTGGAAAGAAGAAGTTGATTTGGAAGTACTCTCATACTCCCATAATCACATCGATTCAAGAATTAATTGGGAAGGAAAGGCGTGGAGGTTCACGGGGATTTATGGCCACTCGGAAGGTCATAAGAAACACCTTACTTGGGATTTAATCCGAATTCTACACAGTGGAAATGATAGCCCCTGGGTTATTGGTGGAGACTTCAATGAAATTTTGTGGGATAAGGAAAAACTTGGGGGAGTTCCTAAAGAAAGAAAATTCCTAGAGCAATTTAGAGAAGTTTTGGATGATTGCAATTTAATGGATATGCCATCCAAAGGCTCTCCATTCACTTGGTGGAATAGAAGGAAAGATTATCACATTTGGGAAAGATTAGATAGATTTATTTGTAATGCAGCCTTTGAGAAACTGGGTTTTCCGTTGGCAATTCAGCATCTAGATTGGACAAGCTCTGACCATAGACCAATTGAAATATCCTGTAAAATAATCCTTCCAACAAGAGGATTAATTTGA
mRNA sequence
ATGAAAATTTTAAGTTGGAATGCTTGTGGATTGGGGAATCCAAGAGCATTCCAAGCTTTGGTAGCCTTATTAAAGGCAAGATCTCCCCAAGCGTTCTTTTTATCTGAAACAAAAAGCGGCAAGGAAGTGGCTAGTAGAGTGAAGATTTTAGGAAGTTTTCACGGTTGTTTGTCAGTTGATAGTGAAAGATCTAGAGGAGGGTTATACCTTCTGTGGAAAGAAGAAGTTGATTTGGAAGTACTCTCATACTCCCATAATCACATCGATTCAAGAATTAATTGGGAAGGAAAGGCGTGGAGGTTCACGGGGATTTATGGCCACTCGGAAGGTCATAAGAAACACCTTACTTGGGATTTAATCCGAATTCTACACAGTGGAAATGATAGCCCCTGGGTTATTGGTGGAGACTTCAATGAAATTTTGTGGGATAAGGAAAAACTTGGGGGAGTTCCTAAAGAAAGAAAATTCCTAGAGCAATTTAGAGAAGTTTTGGATGATTGCAATTTAATGGATATGCCATCCAAAGGCTCTCCATTCACTTGGTGGAATAGAAGGAAAGATTATCACATTTGGGAAAGATTAGATAGATTTATTTGTAATGCAGCCTTTGAGAAACTGGGTTTTCCGTTGGCAATTCAGCATCTAGATTGGACAAGCTCTGACCATAGACCAATTGAAATATCCTGTAAAATAATCCTTCCAACAAGAGGATTAATTTGA
Coding sequence (CDS)
ATGAAAATTTTAAGTTGGAATGCTTGTGGATTGGGGAATCCAAGAGCATTCCAAGCTTTGGTAGCCTTATTAAAGGCAAGATCTCCCCAAGCGTTCTTTTTATCTGAAACAAAAAGCGGCAAGGAAGTGGCTAGTAGAGTGAAGATTTTAGGAAGTTTTCACGGTTGTTTGTCAGTTGATAGTGAAAGATCTAGAGGAGGGTTATACCTTCTGTGGAAAGAAGAAGTTGATTTGGAAGTACTCTCATACTCCCATAATCACATCGATTCAAGAATTAATTGGGAAGGAAAGGCGTGGAGGTTCACGGGGATTTATGGCCACTCGGAAGGTCATAAGAAACACCTTACTTGGGATTTAATCCGAATTCTACACAGTGGAAATGATAGCCCCTGGGTTATTGGTGGAGACTTCAATGAAATTTTGTGGGATAAGGAAAAACTTGGGGGAGTTCCTAAAGAAAGAAAATTCCTAGAGCAATTTAGAGAAGTTTTGGATGATTGCAATTTAATGGATATGCCATCCAAAGGCTCTCCATTCACTTGGTGGAATAGAAGGAAAGATTATCACATTTGGGAAAGATTAGATAGATTTATTTGTAATGCAGCCTTTGAGAAACTGGGTTTTCCGTTGGCAATTCAGCATCTAGATTGGACAAGCTCTGACCATAGACCAATTGAAATATCCTGTAAAATAATCCTTCCAACAAGAGGATTAATTTGA
Protein sequence
MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVDSERSRGGLYLLWKEEVDLEVLSYSHNHIDSRINWEGKAWRFTGIYGHSEGHKKHLTWDLIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSPFTWWNRRKDYHIWERLDRFICNAAFEKLGFPLAIQHLDWTSSDHRPIEISCKIILPTRGLI
Homology
BLAST of CaUC08G141920 vs. NCBI nr
Match:
XP_042973125.1 (uncharacterized protein LOC122304929 [Carya illinoinensis])
HSP 1 Score: 211.1 bits (536), Expect = 1.1e-50
Identity = 107/244 (43.85%), Postives = 147/244 (60.25%), Query Frame = 0
Query: 1 MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
MK+LSWNA GLGNPR +AL L+K P FL ETK + RVK FH CL++D
Sbjct: 1 MKLLSWNARGLGNPRGIRALRDLVKKEGPDIMFLQETKVSSRIMDRVKYQVGFHNCLTID 60
Query: 61 SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRI---NWEGKAWRFTGIYGHSEGHKKHLTW 120
E GGL LLW++EV+L + S+S +HID+ + + EG W+ TG+YGH E +++ TW
Sbjct: 61 CEGRSGGLSLLWRQEVELTIRSFSKHHIDAEVKDSDSEG-CWQVTGLYGHPETNRREETW 120
Query: 121 DLIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGS 180
DL+R L G W++ GDFNEI EK GG + +E FR ++DDC L+D+ +G+
Sbjct: 121 DLMRSLSRGAHERWLVMGDFNEITSRMEKKGGKDRAEFQMESFRRMIDDCTLVDLDYEGT 180
Query: 181 PFTWWNRRKDYH-IWERLDRFICNAAFEKLGFPLA-IQHLDWTSSDHRPIEISCKIILPT 240
FTWWN R+ + I ERLDR + N A+ + FP A + H S+H P I+L T
Sbjct: 181 SFTWWNNREGVNAIHERLDRALANTAWCR-AFPYAKVVHTSAAYSNHHP------IVLQT 236
BLAST of CaUC08G141920 vs. NCBI nr
Match:
KAG2693398.1 (hypothetical protein I3760_08G095200 [Carya illinoinensis])
HSP 1 Score: 206.8 bits (525), Expect = 2.0e-49
Identity = 106/244 (43.44%), Postives = 145/244 (59.43%), Query Frame = 0
Query: 1 MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
MK+L WNA GLGNPR +AL L+K P FL ETK + RVK H CL+VD
Sbjct: 1 MKLLRWNARGLGNPRGIRALRDLVKKEGPDILFLQETKVSSRIMDRVKYQVGLHNCLTVD 60
Query: 61 SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRI---NWEGKAWRFTGIYGHSEGHKKHLTW 120
E GGL LLW++EV+L + S+S +HID+ + + EG W+ TG+YGH E +++ TW
Sbjct: 61 CEGRSGGLSLLWRQEVELTIRSFSKHHIDAEVKDSDSEG-CWQVTGLYGHLETNRREETW 120
Query: 121 DLIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGS 180
DL+R L G W++ GDFNEI EK GG + +E F+ ++DDC L+D+ +G+
Sbjct: 121 DLMRSLSRGAHERWLVIGDFNEITSRMEKKGGKDRAEFQMESFKRMIDDCTLVDLGYEGT 180
Query: 181 PFTWWNRRKDYH-IWERLDRFICNAAFEKLGFPLA-IQHLDWTSSDHRPIEISCKIILPT 240
FTWWN R+ + I ERLDR + N A+ + FP A + H SDH P I+L T
Sbjct: 181 SFTWWNNREGVNAIHERLDRALANTAWCR-AFPYAKVVHTSAAYSDHHP------IVLQT 236
BLAST of CaUC08G141920 vs. NCBI nr
Match:
XP_042972796.1 (uncharacterized protein LOC122304603 [Carya illinoinensis])
HSP 1 Score: 206.5 bits (524), Expect = 2.6e-49
Identity = 101/229 (44.10%), Postives = 142/229 (62.01%), Query Frame = 0
Query: 1 MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
MK +SWN+ GLGNPR +AL L++ P FL ETK R+++ F C V+
Sbjct: 1 MKTISWNSRGLGNPRGVRALCDLVRREVPAVLFLMETKLTSRQMERIRVRVGFECCFVVN 60
Query: 61 SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRINWE--GKAWRFTGIYGHSEGHKKHLTWD 120
S+ +GG+ LLW+ E+ L + S+S HID++I+ G W+FTG+YGH E K+ TW
Sbjct: 61 SDGRKGGVALLWRNEIKLSIKSFSLFHIDAKISGTDGGMEWKFTGLYGHLEIEKREETWS 120
Query: 121 LIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSP 180
L+R L + PW++ GDFNE+L +EK+GG P+ ++ FR VLDDCNL+D+ KG
Sbjct: 121 LLRALREEGNIPWLVCGDFNEVLSQQEKMGGRPRPEMLMQAFRSVLDDCNLIDLGFKGQK 180
Query: 181 FTWWNRR-KDYHIWERLDRFICNAAFEKLGFPLA-IQHLDWTSSDHRPI 226
+TW NRR +D + ERLDRF+ + K FPL+ + H SSDH PI
Sbjct: 181 YTWCNRRYEDGVVSERLDRFVATPNW-KACFPLSRVVHGVAASSDHLPI 228
BLAST of CaUC08G141920 vs. NCBI nr
Match:
XP_042944769.1 (uncharacterized protein LOC122278652 [Carya illinoinensis])
HSP 1 Score: 205.3 bits (521), Expect = 5.9e-49
Identity = 107/243 (44.03%), Postives = 144/243 (59.26%), Query Frame = 0
Query: 1 MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
MK LSWNA GLGNPR +AL L+K P FL ETK + RVK H CL+VD
Sbjct: 1 MKSLSWNARGLGNPRGIRALHDLVKKEGPDIMFLQETKVSSRIMDRVKYQVGLHNCLTVD 60
Query: 61 SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRI-NWEGKA-WRFTGIYGHSEGHKKHLTWD 120
E GGL LLW++EV+L + S+S +HID+ + + + K W+ TG+Y H E ++ TWD
Sbjct: 61 CEGRSGGLSLLWRQEVELTIKSFSKHHIDAEVKDSDNKGWWQVTGLYRHPETSRREETWD 120
Query: 121 LIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSP 180
L+R L G W++ GDFNEI EK GG + +E FR ++DDC L+D+ S+G+
Sbjct: 121 LMRSLSRGAHERWLVMGDFNEITSRMEKKGGKDRAELQMESFRRIIDDCTLIDLGSEGTS 180
Query: 181 FTWWNRRKDYH-IWERLDRFICNAAFEKLGFPLA-IQHLDWTSSDHRPIEISCKIILPTR 240
FTWWN R+ + I ERLDR + N A+ + FP A + H SDH P I+L T
Sbjct: 181 FTWWNSREGVNAIHERLDRALANNAWCR-AFPYAKVFHTIAAYSDHNP------IVLQTE 236
BLAST of CaUC08G141920 vs. NCBI nr
Match:
XP_042980077.1 (uncharacterized protein LOC122310261 [Carya illinoinensis])
HSP 1 Score: 199.9 bits (507), Expect = 2.5e-47
Identity = 101/227 (44.49%), Postives = 131/227 (57.71%), Query Frame = 0
Query: 1 MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
MK + WN+CGLGNP +AL L+ P FL ETK + +K F C SVD
Sbjct: 1 MKTICWNSCGLGNPSGIRALRDLIAREGPDLLFLQETKLLTKGMDTLKRKLGFVNCFSVD 60
Query: 61 SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRINWEG-KAWRFTGIYGHSEGHKKHLTWDL 120
SE GGL LLW ++ +E+ S+S HID I + WRFTG+YGH + ++ TW+L
Sbjct: 61 SEGRSGGLGLLWNSDLRVELRSFSKYHIDVHIKMDDLMVWRFTGLYGHPDALRRTFTWNL 120
Query: 121 IRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSPF 180
IR L S PW++GGD NE+L EK GG + +E FREVL +C L D+ KG F
Sbjct: 121 IRTLSSIEQIPWLVGGDLNEVLHPHEKRGGRDRPVSQIEAFREVLTECELRDLGYKGQRF 180
Query: 181 TWWN-RRKDYHIWERLDRFICNAAFEKLGFPLAIQHLDWTSSDHRPI 226
TWWN R + +I+ERLDRF+ N L L +QH + SDH PI
Sbjct: 181 TWWNGRGGNAYIFERLDRFVGNDLLTHLFPHLVVQHGNVAHSDHIPI 227
BLAST of CaUC08G141920 vs. ExPASy TrEMBL
Match:
A0A803PTM0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 197.6 bits (501), Expect = 5.9e-47
Identity = 96/223 (43.05%), Postives = 139/223 (62.33%), Query Frame = 0
Query: 1 MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
M +L WNA GLGNP ++L +L+ SPQ F++E+K GK A +++ F GC V+
Sbjct: 1 MNLLIWNAQGLGNPWTERSLASLVTNFSPQMIFIAESKIGKVRAESLRVKLGFVGCFVVE 60
Query: 61 SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRINWE-GKAWRFTGIYGHSEGHKKHLTWDL 120
+ GGL LLW +V+ +VLS+S HIDS + E G+ WRFTG YG + ++ +W L
Sbjct: 61 ARGKSGGLILLWSMDVETQVLSFSPFHIDSFVRIENGQWWRFTGFYGDPDPSQRCHSWKL 120
Query: 121 IRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSPF 180
+R + PW +GGDFNEI+ KEK+GG+PK R + FR+ LD C+L D +GS +
Sbjct: 121 LRRISRMYSGPWAVGGDFNEIVSQKEKMGGLPKPRYLINNFRKALDSCHLRDGCYEGSEY 180
Query: 181 TWWNRRKDYHIWERLDRFICNAAFEKLGFPLAIQHLDWTSSDH 223
TW N RK+ I+ERL+R N + + + ++HLD T+SDH
Sbjct: 181 TWCNGRKNDLIFERLNRVCGNLEWFDMFPSMKVRHLDRTNSDH 223
BLAST of CaUC08G141920 vs. ExPASy TrEMBL
Match:
A0A5B6W814 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_011206 PE=4 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 1.7e-46
Identity = 101/236 (42.80%), Postives = 142/236 (60.17%), Query Frame = 0
Query: 1 MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
MKI+ WN CGL NPRA + L K ++P FL ETK ++ RV+ F G + ++
Sbjct: 1 MKIICWNVCGLRNPRAVRRLRYFCKQQNPHIVFLMETKLNQKRVERVRKSCGFSGGIDIE 60
Query: 61 SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRINWEG---KAWRFTGIYGHSEGHKKHLTW 120
+E SRGGL L WK+ V + + S+S HID + WEG K WRFTG YG + W
Sbjct: 61 AEGSRGGLCLAWKDGVVVTLRSFSKWHIDVLL-WEGRIRKEWRFTGFYGSPYSQDRSSVW 120
Query: 121 DLIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGS 180
L++ L GN+ PW++ GDFNEIL+ EK+GG+P+++K +E FR+ L+DC L D+ G
Sbjct: 121 SLLKFLSQGNNYPWLVAGDFNEILYFFEKIGGIPRDQKRMEAFRDTLEDCQLTDIGYSGV 180
Query: 181 PFTW-WNRRKDYHIWERLDRFICNAAFEKLGFPLA-IQHLDWTSSDHRPIEISCKI 232
+ W + +I ERLDR + N + L FP IQHL ++SSDH PI ++ I
Sbjct: 181 RYIWERGNLPETNIRERLDRGVANEEWLLL-FPRGNIQHLTFSSSDHCPILLNTDI 234
BLAST of CaUC08G141920 vs. ExPASy TrEMBL
Match:
A0A803PBM9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 4.3e-45
Identity = 99/233 (42.49%), Postives = 137/233 (58.80%), Query Frame = 0
Query: 1 MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
MK+L WN GLGNP + L +L+ P+ F+SE++ K A +++ + GC V+
Sbjct: 427 MKLLLWNVQGLGNPWTVRTLKSLVNRWDPELVFISESRLKKGKAEALRVSLGYDGCFVVE 486
Query: 61 SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRI-NWEGKAWRFTGIYGHSEGHKKHLTWDL 120
+ GGL LLW VD ++S+S HIDS I EG+ WRFTG YG + ++ +W L
Sbjct: 487 AHGKSGGLILLWSNMVDCNIMSFSSFHIDSFIRKEEGQWWRFTGFYGDPDPTQRCESWKL 546
Query: 121 IRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSPF 180
+ + PWVIGGDFNEIL +KEKLGG PK + FR L+ NL ++ +GS +
Sbjct: 547 LARIGRMYSGPWVIGGDFNEILRNKEKLGGQPKPGYLINNFRMALNGSNLREVEYEGSEY 606
Query: 181 TWWNRRKDYHIWERLDRFICNAAFEKLGFPLA-IQHLDWTSSDHRPIEISCKI 232
TW N RK+ I+ERLDR N + L FP A + HLD SSDH P+ + C +
Sbjct: 607 TWCNGRKNELIFERLDRVCGNPEWFDL-FPKAKVNHLDRVSSDHCPLLLHCLV 658
BLAST of CaUC08G141920 vs. ExPASy TrEMBL
Match:
A0A2N9I7P8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47753 PE=4 SV=1)
HSP 1 Score: 190.3 bits (482), Expect = 9.5e-45
Identity = 97/233 (41.63%), Postives = 130/233 (55.79%), Query Frame = 0
Query: 1 MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
M LSWN GLGNP Q L L++ ++P A FL ET S ++ ++ F L V
Sbjct: 439 MNCLSWNCRGLGNPCTVQELTRLVRVKAPSAVFLMETWSNEDYLEVLRCNLQFSNKLVVH 498
Query: 61 SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRINWEGK--AWRFTGIYGHSEGHKKHLTWD 120
S + GGL L W + D+ + SYSHNHID+ +N EGK AWR TG+YG E H + TWD
Sbjct: 499 SNKKGGGLALFWSNDFDVSIKSYSHNHIDAVVN-EGKSDAWRLTGVYGAPETHNRPKTWD 558
Query: 121 LIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSP 180
L+R L PW GDFNE++ +E G + + + ++ FR VLDDC L+D+ G P
Sbjct: 559 LLRRLDGFYQLPWCCLGDFNEVVKLEEMHGRLKRPDRQMQAFRNVLDDCGLVDLGFNGFP 618
Query: 181 FTWWNRRKDYH-IWERLDRFICNAAFEKLGFPLAIQHLDWTSSDHRPIEISCK 231
FTW N R H W RLDR + N + + HLD SDH+ + I C+
Sbjct: 619 FTWCNNRDPPHTTWVRLDRAVANTEWLARYPRARVDHLDVIKSDHKCLWIVCE 670
BLAST of CaUC08G141920 vs. ExPASy TrEMBL
Match:
A0A1U8HV94 (uncharacterized protein LOC107889912 OS=Gossypium hirsutum OX=3635 GN=LOC107889912 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 98/233 (42.06%), Postives = 136/233 (58.37%), Query Frame = 0
Query: 1 MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
MKILSWN GLGNPR L LK +PQ F ETK K R++ F + VD
Sbjct: 1 MKILSWNVRGLGNPRTVWRLRHSLKLYNPQIVFFMETKIIKNQMERIRRRCGFQNGIDVD 60
Query: 61 SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRI--NWEGKAWRFTGIYGHSEGHKKHLTWD 120
S SRGGL L W+++V + + S+S HID I EG WRFTG YG + ++ +WD
Sbjct: 61 SNGSRGGLCLAWRDDVTISLRSFSKRHIDVIIEDTDEGNRWRFTGFYGSTYMQGRNESWD 120
Query: 121 LIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSP 180
L++ L + + PW + GDFNEI++ EK GG+P+E + ++ FR +L DC+L+D+ G+
Sbjct: 121 LLKNLRNAEELPWFVCGDFNEIMYGHEKRGGLPREERHMDAFRTLLTDCHLVDVGYIGNW 180
Query: 181 FTW-WNRRKDYHIWERLDRFICNAAFEKLGFPLAIQHLDWTSSDHRPIEISCK 231
FTW + +I ERLDR + N + L IQHL + SDH P+ I+ K
Sbjct: 181 FTWKRGNLPETNIQERLDRGVTNEDWLSLFLDAIIQHLPHSFSDHCPLLINKK 233
BLAST of CaUC08G141920 vs. TAIR 10
Match:
AT1G40390.1 (DNAse I-like superfamily protein )
HSP 1 Score: 66.2 bits (160), Expect = 4.0e-11
Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = 0
Query: 107 HSEGHKKHLTWDLIRILHSGN--DSPWVIGGDFNEILWDKEKLGGVPKERKF--LEQFRE 166
++E ++ L D+ R+ S +SPW++ GDFN+I E +P LE +
Sbjct: 96 NTEAERRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQA 155
Query: 167 VLDDCNLMDMPSKGSPFTWWNRRKDYHIWERLDRFICNAAFEKLGFPLAIQHLDWTS-SD 226
+ D +L+D+P +G +TW N ++D I +LDR I N + FP A D S SD
Sbjct: 156 CMRDSDLVDLPCRGVLYTWSNHQQDNPILRKLDRAIVNGCW-LATFPTASAIFDPPSDSD 215
Query: 227 HRPIEISCKIIL 234
H +C +IL
Sbjct: 216 H----AACMVIL 222
BLAST of CaUC08G141920 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 64.7 bits (156), Expect = 1.2e-10
Identity = 44/141 (31.21%), Postives = 69/141 (48.94%), Query Frame = 0
Query: 98 AWRFTGIYGHSEGHKKHLTWD--LIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKE-- 157
+WR Y SE + + WD + ++ D ++ GDF++I + +
Sbjct: 186 SWRLDTNYCCSELGRIWIVWDPSVSVLVFKKTDQLMILVGDFDQIAATSDHYSVLQTSIP 245
Query: 158 RKFLEQFREVLDDCNLMDMPSKGSPFTWWNRRKDYHIWERLDRFICNAAFEKLGFPLAIQ 217
+ LE+F+ L D +L+D+PS+G +TW N + D I +LDR I N + FP AI
Sbjct: 246 MRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRAIANGDWFS-SFPSAIA 305
Query: 218 HLDWTS-SDHRPIEISCKIIL 234
+ + SDH P C IIL
Sbjct: 306 VFELSGVSDHSP----CIIIL 321
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A803PTM0 | 5.9e-47 | 43.05 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A5B6W814 | 1.7e-46 | 42.80 | Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_011206 PE=4 SV=1 | [more] |
A0A803PBM9 | 4.3e-45 | 42.49 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2N9I7P8 | 9.5e-45 | 41.63 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47753 PE=4 SV=1 | [more] |
A0A1U8HV94 | 1.2e-44 | 42.06 | uncharacterized protein LOC107889912 OS=Gossypium hirsutum OX=3635 GN=LOC1078899... | [more] |