CaUC08G141920 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC08G141920
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionReverse transcriptase
LocationCiama_Chr08: 2027512 .. 2028231 (+)
RNA-Seq ExpressionCaUC08G141920
SyntenyCaUC08G141920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATTTTAAGTTGGAATGCTTGTGGATTGGGGAATCCAAGAGCATTCCAAGCTTTGGTAGCCTTATTAAAGGCAAGATCTCCCCAAGCGTTCTTTTTATCTGAAACAAAAAGCGGCAAGGAAGTGGCTAGTAGAGTGAAGATTTTAGGAAGTTTTCACGGTTGTTTGTCAGTTGATAGTGAAAGATCTAGAGGAGGGTTATACCTTCTGTGGAAAGAAGAAGTTGATTTGGAAGTACTCTCATACTCCCATAATCACATCGATTCAAGAATTAATTGGGAAGGAAAGGCGTGGAGGTTCACGGGGATTTATGGCCACTCGGAAGGTCATAAGAAACACCTTACTTGGGATTTAATCCGAATTCTACACAGTGGAAATGATAGCCCCTGGGTTATTGGTGGAGACTTCAATGAAATTTTGTGGGATAAGGAAAAACTTGGGGGAGTTCCTAAAGAAAGAAAATTCCTAGAGCAATTTAGAGAAGTTTTGGATGATTGCAATTTAATGGATATGCCATCCAAAGGCTCTCCATTCACTTGGTGGAATAGAAGGAAAGATTATCACATTTGGGAAAGATTAGATAGATTTATTTGTAATGCAGCCTTTGAGAAACTGGGTTTTCCGTTGGCAATTCAGCATCTAGATTGGACAAGCTCTGACCATAGACCAATTGAAATATCCTGTAAAATAATCCTTCCAACAAGAGGATTAATTTGA

mRNA sequence

ATGAAAATTTTAAGTTGGAATGCTTGTGGATTGGGGAATCCAAGAGCATTCCAAGCTTTGGTAGCCTTATTAAAGGCAAGATCTCCCCAAGCGTTCTTTTTATCTGAAACAAAAAGCGGCAAGGAAGTGGCTAGTAGAGTGAAGATTTTAGGAAGTTTTCACGGTTGTTTGTCAGTTGATAGTGAAAGATCTAGAGGAGGGTTATACCTTCTGTGGAAAGAAGAAGTTGATTTGGAAGTACTCTCATACTCCCATAATCACATCGATTCAAGAATTAATTGGGAAGGAAAGGCGTGGAGGTTCACGGGGATTTATGGCCACTCGGAAGGTCATAAGAAACACCTTACTTGGGATTTAATCCGAATTCTACACAGTGGAAATGATAGCCCCTGGGTTATTGGTGGAGACTTCAATGAAATTTTGTGGGATAAGGAAAAACTTGGGGGAGTTCCTAAAGAAAGAAAATTCCTAGAGCAATTTAGAGAAGTTTTGGATGATTGCAATTTAATGGATATGCCATCCAAAGGCTCTCCATTCACTTGGTGGAATAGAAGGAAAGATTATCACATTTGGGAAAGATTAGATAGATTTATTTGTAATGCAGCCTTTGAGAAACTGGGTTTTCCGTTGGCAATTCAGCATCTAGATTGGACAAGCTCTGACCATAGACCAATTGAAATATCCTGTAAAATAATCCTTCCAACAAGAGGATTAATTTGA

Coding sequence (CDS)

ATGAAAATTTTAAGTTGGAATGCTTGTGGATTGGGGAATCCAAGAGCATTCCAAGCTTTGGTAGCCTTATTAAAGGCAAGATCTCCCCAAGCGTTCTTTTTATCTGAAACAAAAAGCGGCAAGGAAGTGGCTAGTAGAGTGAAGATTTTAGGAAGTTTTCACGGTTGTTTGTCAGTTGATAGTGAAAGATCTAGAGGAGGGTTATACCTTCTGTGGAAAGAAGAAGTTGATTTGGAAGTACTCTCATACTCCCATAATCACATCGATTCAAGAATTAATTGGGAAGGAAAGGCGTGGAGGTTCACGGGGATTTATGGCCACTCGGAAGGTCATAAGAAACACCTTACTTGGGATTTAATCCGAATTCTACACAGTGGAAATGATAGCCCCTGGGTTATTGGTGGAGACTTCAATGAAATTTTGTGGGATAAGGAAAAACTTGGGGGAGTTCCTAAAGAAAGAAAATTCCTAGAGCAATTTAGAGAAGTTTTGGATGATTGCAATTTAATGGATATGCCATCCAAAGGCTCTCCATTCACTTGGTGGAATAGAAGGAAAGATTATCACATTTGGGAAAGATTAGATAGATTTATTTGTAATGCAGCCTTTGAGAAACTGGGTTTTCCGTTGGCAATTCAGCATCTAGATTGGACAAGCTCTGACCATAGACCAATTGAAATATCCTGTAAAATAATCCTTCCAACAAGAGGATTAATTTGA

Protein sequence

MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVDSERSRGGLYLLWKEEVDLEVLSYSHNHIDSRINWEGKAWRFTGIYGHSEGHKKHLTWDLIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSPFTWWNRRKDYHIWERLDRFICNAAFEKLGFPLAIQHLDWTSSDHRPIEISCKIILPTRGLI
Homology
BLAST of CaUC08G141920 vs. NCBI nr
Match: XP_042973125.1 (uncharacterized protein LOC122304929 [Carya illinoinensis])

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-50
Identity = 107/244 (43.85%), Postives = 147/244 (60.25%), Query Frame = 0

Query: 1   MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
           MK+LSWNA GLGNPR  +AL  L+K   P   FL ETK    +  RVK    FH CL++D
Sbjct: 1   MKLLSWNARGLGNPRGIRALRDLVKKEGPDIMFLQETKVSSRIMDRVKYQVGFHNCLTID 60

Query: 61  SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRI---NWEGKAWRFTGIYGHSEGHKKHLTW 120
            E   GGL LLW++EV+L + S+S +HID+ +   + EG  W+ TG+YGH E +++  TW
Sbjct: 61  CEGRSGGLSLLWRQEVELTIRSFSKHHIDAEVKDSDSEG-CWQVTGLYGHPETNRREETW 120

Query: 121 DLIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGS 180
           DL+R L  G    W++ GDFNEI    EK GG  +    +E FR ++DDC L+D+  +G+
Sbjct: 121 DLMRSLSRGAHERWLVMGDFNEITSRMEKKGGKDRAEFQMESFRRMIDDCTLVDLDYEGT 180

Query: 181 PFTWWNRRKDYH-IWERLDRFICNAAFEKLGFPLA-IQHLDWTSSDHRPIEISCKIILPT 240
            FTWWN R+  + I ERLDR + N A+ +  FP A + H     S+H P      I+L T
Sbjct: 181 SFTWWNNREGVNAIHERLDRALANTAWCR-AFPYAKVVHTSAAYSNHHP------IVLQT 236

BLAST of CaUC08G141920 vs. NCBI nr
Match: KAG2693398.1 (hypothetical protein I3760_08G095200 [Carya illinoinensis])

HSP 1 Score: 206.8 bits (525), Expect = 2.0e-49
Identity = 106/244 (43.44%), Postives = 145/244 (59.43%), Query Frame = 0

Query: 1   MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
           MK+L WNA GLGNPR  +AL  L+K   P   FL ETK    +  RVK     H CL+VD
Sbjct: 1   MKLLRWNARGLGNPRGIRALRDLVKKEGPDILFLQETKVSSRIMDRVKYQVGLHNCLTVD 60

Query: 61  SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRI---NWEGKAWRFTGIYGHSEGHKKHLTW 120
            E   GGL LLW++EV+L + S+S +HID+ +   + EG  W+ TG+YGH E +++  TW
Sbjct: 61  CEGRSGGLSLLWRQEVELTIRSFSKHHIDAEVKDSDSEG-CWQVTGLYGHLETNRREETW 120

Query: 121 DLIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGS 180
           DL+R L  G    W++ GDFNEI    EK GG  +    +E F+ ++DDC L+D+  +G+
Sbjct: 121 DLMRSLSRGAHERWLVIGDFNEITSRMEKKGGKDRAEFQMESFKRMIDDCTLVDLGYEGT 180

Query: 181 PFTWWNRRKDYH-IWERLDRFICNAAFEKLGFPLA-IQHLDWTSSDHRPIEISCKIILPT 240
            FTWWN R+  + I ERLDR + N A+ +  FP A + H     SDH P      I+L T
Sbjct: 181 SFTWWNNREGVNAIHERLDRALANTAWCR-AFPYAKVVHTSAAYSDHHP------IVLQT 236

BLAST of CaUC08G141920 vs. NCBI nr
Match: XP_042972796.1 (uncharacterized protein LOC122304603 [Carya illinoinensis])

HSP 1 Score: 206.5 bits (524), Expect = 2.6e-49
Identity = 101/229 (44.10%), Postives = 142/229 (62.01%), Query Frame = 0

Query: 1   MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
           MK +SWN+ GLGNPR  +AL  L++   P   FL ETK       R+++   F  C  V+
Sbjct: 1   MKTISWNSRGLGNPRGVRALCDLVRREVPAVLFLMETKLTSRQMERIRVRVGFECCFVVN 60

Query: 61  SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRINWE--GKAWRFTGIYGHSEGHKKHLTWD 120
           S+  +GG+ LLW+ E+ L + S+S  HID++I+    G  W+FTG+YGH E  K+  TW 
Sbjct: 61  SDGRKGGVALLWRNEIKLSIKSFSLFHIDAKISGTDGGMEWKFTGLYGHLEIEKREETWS 120

Query: 121 LIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSP 180
           L+R L    + PW++ GDFNE+L  +EK+GG P+    ++ FR VLDDCNL+D+  KG  
Sbjct: 121 LLRALREEGNIPWLVCGDFNEVLSQQEKMGGRPRPEMLMQAFRSVLDDCNLIDLGFKGQK 180

Query: 181 FTWWNRR-KDYHIWERLDRFICNAAFEKLGFPLA-IQHLDWTSSDHRPI 226
           +TW NRR +D  + ERLDRF+    + K  FPL+ + H    SSDH PI
Sbjct: 181 YTWCNRRYEDGVVSERLDRFVATPNW-KACFPLSRVVHGVAASSDHLPI 228

BLAST of CaUC08G141920 vs. NCBI nr
Match: XP_042944769.1 (uncharacterized protein LOC122278652 [Carya illinoinensis])

HSP 1 Score: 205.3 bits (521), Expect = 5.9e-49
Identity = 107/243 (44.03%), Postives = 144/243 (59.26%), Query Frame = 0

Query: 1   MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
           MK LSWNA GLGNPR  +AL  L+K   P   FL ETK    +  RVK     H CL+VD
Sbjct: 1   MKSLSWNARGLGNPRGIRALHDLVKKEGPDIMFLQETKVSSRIMDRVKYQVGLHNCLTVD 60

Query: 61  SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRI-NWEGKA-WRFTGIYGHSEGHKKHLTWD 120
            E   GGL LLW++EV+L + S+S +HID+ + + + K  W+ TG+Y H E  ++  TWD
Sbjct: 61  CEGRSGGLSLLWRQEVELTIKSFSKHHIDAEVKDSDNKGWWQVTGLYRHPETSRREETWD 120

Query: 121 LIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSP 180
           L+R L  G    W++ GDFNEI    EK GG  +    +E FR ++DDC L+D+ S+G+ 
Sbjct: 121 LMRSLSRGAHERWLVMGDFNEITSRMEKKGGKDRAELQMESFRRIIDDCTLIDLGSEGTS 180

Query: 181 FTWWNRRKDYH-IWERLDRFICNAAFEKLGFPLA-IQHLDWTSSDHRPIEISCKIILPTR 240
           FTWWN R+  + I ERLDR + N A+ +  FP A + H     SDH P      I+L T 
Sbjct: 181 FTWWNSREGVNAIHERLDRALANNAWCR-AFPYAKVFHTIAAYSDHNP------IVLQTE 236

BLAST of CaUC08G141920 vs. NCBI nr
Match: XP_042980077.1 (uncharacterized protein LOC122310261 [Carya illinoinensis])

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-47
Identity = 101/227 (44.49%), Postives = 131/227 (57.71%), Query Frame = 0

Query: 1   MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
           MK + WN+CGLGNP   +AL  L+    P   FL ETK   +    +K    F  C SVD
Sbjct: 1   MKTICWNSCGLGNPSGIRALRDLIAREGPDLLFLQETKLLTKGMDTLKRKLGFVNCFSVD 60

Query: 61  SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRINWEG-KAWRFTGIYGHSEGHKKHLTWDL 120
           SE   GGL LLW  ++ +E+ S+S  HID  I  +    WRFTG+YGH +  ++  TW+L
Sbjct: 61  SEGRSGGLGLLWNSDLRVELRSFSKYHIDVHIKMDDLMVWRFTGLYGHPDALRRTFTWNL 120

Query: 121 IRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSPF 180
           IR L S    PW++GGD NE+L   EK GG  +    +E FREVL +C L D+  KG  F
Sbjct: 121 IRTLSSIEQIPWLVGGDLNEVLHPHEKRGGRDRPVSQIEAFREVLTECELRDLGYKGQRF 180

Query: 181 TWWN-RRKDYHIWERLDRFICNAAFEKLGFPLAIQHLDWTSSDHRPI 226
           TWWN R  + +I+ERLDRF+ N     L   L +QH +   SDH PI
Sbjct: 181 TWWNGRGGNAYIFERLDRFVGNDLLTHLFPHLVVQHGNVAHSDHIPI 227

BLAST of CaUC08G141920 vs. ExPASy TrEMBL
Match: A0A803PTM0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 5.9e-47
Identity = 96/223 (43.05%), Postives = 139/223 (62.33%), Query Frame = 0

Query: 1   MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
           M +L WNA GLGNP   ++L +L+   SPQ  F++E+K GK  A  +++   F GC  V+
Sbjct: 1   MNLLIWNAQGLGNPWTERSLASLVTNFSPQMIFIAESKIGKVRAESLRVKLGFVGCFVVE 60

Query: 61  SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRINWE-GKAWRFTGIYGHSEGHKKHLTWDL 120
           +    GGL LLW  +V+ +VLS+S  HIDS +  E G+ WRFTG YG  +  ++  +W L
Sbjct: 61  ARGKSGGLILLWSMDVETQVLSFSPFHIDSFVRIENGQWWRFTGFYGDPDPSQRCHSWKL 120

Query: 121 IRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSPF 180
           +R +      PW +GGDFNEI+  KEK+GG+PK R  +  FR+ LD C+L D   +GS +
Sbjct: 121 LRRISRMYSGPWAVGGDFNEIVSQKEKMGGLPKPRYLINNFRKALDSCHLRDGCYEGSEY 180

Query: 181 TWWNRRKDYHIWERLDRFICNAAFEKLGFPLAIQHLDWTSSDH 223
           TW N RK+  I+ERL+R   N  +  +   + ++HLD T+SDH
Sbjct: 181 TWCNGRKNDLIFERLNRVCGNLEWFDMFPSMKVRHLDRTNSDH 223

BLAST of CaUC08G141920 vs. ExPASy TrEMBL
Match: A0A5B6W814 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_011206 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.7e-46
Identity = 101/236 (42.80%), Postives = 142/236 (60.17%), Query Frame = 0

Query: 1   MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
           MKI+ WN CGL NPRA + L    K ++P   FL ETK  ++   RV+    F G + ++
Sbjct: 1   MKIICWNVCGLRNPRAVRRLRYFCKQQNPHIVFLMETKLNQKRVERVRKSCGFSGGIDIE 60

Query: 61  SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRINWEG---KAWRFTGIYGHSEGHKKHLTW 120
           +E SRGGL L WK+ V + + S+S  HID  + WEG   K WRFTG YG      +   W
Sbjct: 61  AEGSRGGLCLAWKDGVVVTLRSFSKWHIDVLL-WEGRIRKEWRFTGFYGSPYSQDRSSVW 120

Query: 121 DLIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGS 180
            L++ L  GN+ PW++ GDFNEIL+  EK+GG+P+++K +E FR+ L+DC L D+   G 
Sbjct: 121 SLLKFLSQGNNYPWLVAGDFNEILYFFEKIGGIPRDQKRMEAFRDTLEDCQLTDIGYSGV 180

Query: 181 PFTW-WNRRKDYHIWERLDRFICNAAFEKLGFPLA-IQHLDWTSSDHRPIEISCKI 232
            + W      + +I ERLDR + N  +  L FP   IQHL ++SSDH PI ++  I
Sbjct: 181 RYIWERGNLPETNIRERLDRGVANEEWLLL-FPRGNIQHLTFSSSDHCPILLNTDI 234

BLAST of CaUC08G141920 vs. ExPASy TrEMBL
Match: A0A803PBM9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 4.3e-45
Identity = 99/233 (42.49%), Postives = 137/233 (58.80%), Query Frame = 0

Query: 1   MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
           MK+L WN  GLGNP   + L +L+    P+  F+SE++  K  A  +++   + GC  V+
Sbjct: 427 MKLLLWNVQGLGNPWTVRTLKSLVNRWDPELVFISESRLKKGKAEALRVSLGYDGCFVVE 486

Query: 61  SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRI-NWEGKAWRFTGIYGHSEGHKKHLTWDL 120
           +    GGL LLW   VD  ++S+S  HIDS I   EG+ WRFTG YG  +  ++  +W L
Sbjct: 487 AHGKSGGLILLWSNMVDCNIMSFSSFHIDSFIRKEEGQWWRFTGFYGDPDPTQRCESWKL 546

Query: 121 IRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSPF 180
           +  +      PWVIGGDFNEIL +KEKLGG PK    +  FR  L+  NL ++  +GS +
Sbjct: 547 LARIGRMYSGPWVIGGDFNEILRNKEKLGGQPKPGYLINNFRMALNGSNLREVEYEGSEY 606

Query: 181 TWWNRRKDYHIWERLDRFICNAAFEKLGFPLA-IQHLDWTSSDHRPIEISCKI 232
           TW N RK+  I+ERLDR   N  +  L FP A + HLD  SSDH P+ + C +
Sbjct: 607 TWCNGRKNELIFERLDRVCGNPEWFDL-FPKAKVNHLDRVSSDHCPLLLHCLV 658

BLAST of CaUC08G141920 vs. ExPASy TrEMBL
Match: A0A2N9I7P8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47753 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 9.5e-45
Identity = 97/233 (41.63%), Postives = 130/233 (55.79%), Query Frame = 0

Query: 1   MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
           M  LSWN  GLGNP   Q L  L++ ++P A FL ET S ++    ++    F   L V 
Sbjct: 439 MNCLSWNCRGLGNPCTVQELTRLVRVKAPSAVFLMETWSNEDYLEVLRCNLQFSNKLVVH 498

Query: 61  SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRINWEGK--AWRFTGIYGHSEGHKKHLTWD 120
           S +  GGL L W  + D+ + SYSHNHID+ +N EGK  AWR TG+YG  E H +  TWD
Sbjct: 499 SNKKGGGLALFWSNDFDVSIKSYSHNHIDAVVN-EGKSDAWRLTGVYGAPETHNRPKTWD 558

Query: 121 LIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSP 180
           L+R L      PW   GDFNE++  +E  G + +  + ++ FR VLDDC L+D+   G P
Sbjct: 559 LLRRLDGFYQLPWCCLGDFNEVVKLEEMHGRLKRPDRQMQAFRNVLDDCGLVDLGFNGFP 618

Query: 181 FTWWNRRKDYH-IWERLDRFICNAAFEKLGFPLAIQHLDWTSSDHRPIEISCK 231
           FTW N R   H  W RLDR + N  +        + HLD   SDH+ + I C+
Sbjct: 619 FTWCNNRDPPHTTWVRLDRAVANTEWLARYPRARVDHLDVIKSDHKCLWIVCE 670

BLAST of CaUC08G141920 vs. ExPASy TrEMBL
Match: A0A1U8HV94 (uncharacterized protein LOC107889912 OS=Gossypium hirsutum OX=3635 GN=LOC107889912 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 98/233 (42.06%), Postives = 136/233 (58.37%), Query Frame = 0

Query: 1   MKILSWNACGLGNPRAFQALVALLKARSPQAFFLSETKSGKEVASRVKILGSFHGCLSVD 60
           MKILSWN  GLGNPR    L   LK  +PQ  F  ETK  K    R++    F   + VD
Sbjct: 1   MKILSWNVRGLGNPRTVWRLRHSLKLYNPQIVFFMETKIIKNQMERIRRRCGFQNGIDVD 60

Query: 61  SERSRGGLYLLWKEEVDLEVLSYSHNHIDSRI--NWEGKAWRFTGIYGHSEGHKKHLTWD 120
           S  SRGGL L W+++V + + S+S  HID  I    EG  WRFTG YG +    ++ +WD
Sbjct: 61  SNGSRGGLCLAWRDDVTISLRSFSKRHIDVIIEDTDEGNRWRFTGFYGSTYMQGRNESWD 120

Query: 121 LIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKERKFLEQFREVLDDCNLMDMPSKGSP 180
           L++ L +  + PW + GDFNEI++  EK GG+P+E + ++ FR +L DC+L+D+   G+ 
Sbjct: 121 LLKNLRNAEELPWFVCGDFNEIMYGHEKRGGLPREERHMDAFRTLLTDCHLVDVGYIGNW 180

Query: 181 FTW-WNRRKDYHIWERLDRFICNAAFEKLGFPLAIQHLDWTSSDHRPIEISCK 231
           FTW      + +I ERLDR + N  +  L     IQHL  + SDH P+ I+ K
Sbjct: 181 FTWKRGNLPETNIQERLDRGVTNEDWLSLFLDAIIQHLPHSFSDHCPLLINKK 233

BLAST of CaUC08G141920 vs. TAIR 10
Match: AT1G40390.1 (DNAse I-like superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 4.0e-11
Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = 0

Query: 107 HSEGHKKHLTWDLIRILHSGN--DSPWVIGGDFNEILWDKEKLGGVPKERKF--LEQFRE 166
           ++E  ++ L  D+ R+  S    +SPW++ GDFN+I    E    +P       LE  + 
Sbjct: 96  NTEAERRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQA 155

Query: 167 VLDDCNLMDMPSKGSPFTWWNRRKDYHIWERLDRFICNAAFEKLGFPLAIQHLDWTS-SD 226
            + D +L+D+P +G  +TW N ++D  I  +LDR I N  +    FP A    D  S SD
Sbjct: 156 CMRDSDLVDLPCRGVLYTWSNHQQDNPILRKLDRAIVNGCW-LATFPTASAIFDPPSDSD 215

Query: 227 HRPIEISCKIIL 234
           H     +C +IL
Sbjct: 216 H----AACMVIL 222

BLAST of CaUC08G141920 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-10
Identity = 44/141 (31.21%), Postives = 69/141 (48.94%), Query Frame = 0

Query: 98  AWRFTGIYGHSEGHKKHLTWD--LIRILHSGNDSPWVIGGDFNEILWDKEKLGGVPKE-- 157
           +WR    Y  SE  +  + WD  +  ++    D   ++ GDF++I    +    +     
Sbjct: 186 SWRLDTNYCCSELGRIWIVWDPSVSVLVFKKTDQLMILVGDFDQIAATSDHYSVLQTSIP 245

Query: 158 RKFLEQFREVLDDCNLMDMPSKGSPFTWWNRRKDYHIWERLDRFICNAAFEKLGFPLAIQ 217
            + LE+F+  L D +L+D+PS+G  +TW N + D  I  +LDR I N  +    FP AI 
Sbjct: 246 MRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRAIANGDWFS-SFPSAIA 305

Query: 218 HLDWTS-SDHRPIEISCKIIL 234
             + +  SDH P    C IIL
Sbjct: 306 VFELSGVSDHSP----CIIIL 321

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_042973125.11.1e-5043.85uncharacterized protein LOC122304929 [Carya illinoinensis][more]
KAG2693398.12.0e-4943.44hypothetical protein I3760_08G095200 [Carya illinoinensis][more]
XP_042972796.12.6e-4944.10uncharacterized protein LOC122304603 [Carya illinoinensis][more]
XP_042944769.15.9e-4944.03uncharacterized protein LOC122278652 [Carya illinoinensis][more]
XP_042980077.12.5e-4744.49uncharacterized protein LOC122310261 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A803PTM05.9e-4743.05Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A5B6W8141.7e-4642.80Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_011206 PE=4 SV=1[more]
A0A803PBM94.3e-4542.49Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2N9I7P89.5e-4541.63Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47753 PE=4 SV=1[more]
A0A1U8HV941.2e-4442.06uncharacterized protein LOC107889912 OS=Gossypium hirsutum OX=3635 GN=LOC1078899... [more]
Match NameE-valueIdentityDescription
AT1G40390.14.0e-1132.58DNAse I-like superfamily protein [more]
AT1G43760.11.2e-1031.21DNAse I-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 1..228
e-value: 2.3E-36
score: 127.7
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..227
NoneNo IPR availablePANTHERPTHR33710:SF35SUBFAMILY NOT NAMEDcoord: 96..229
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 96..229

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC08G141920.1CaUC08G141920.1mRNA