Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAATCGGAATCGGCGAAAGAATGCAAGAGGCACCCAAATCACAATCTCTTACCCGGAATTTGCCCTTCCTGTCTTACAGAAAAGCTTCAACAATTCCATCAATCTTCTATTTATTCCGATTCTCATTCGACCACCTTCTCTTCTTCTTCTTCCTCTTCCCTTCCTCACTCCTCTGAATTTTTCTTCTCCGCCGATTCCTCACACCGCCACCGCCGCCACCACCACCACCACCACCGTAGGAACGCCTCCGAGTTGGTCACTGGGTCGATGACCGCAGATTTGTTTGGGGACAAGCTGAAGAAGAGCGGCTCCATTAGGATCTCGGCAGATGGCGGCGCCGGGGCCAAAGGAGGAGGAAAGAAGAAACTTGGGTTTTGGTCCAGGTTGTTACTCCGCCCCAAGGCTTTCTATTTTCNTGCTTTACCACCACCACTACCAGAAGTACTATGA
mRNA sequence
ATGGGGAAATCGGAATCGGCGAAAGAATGCAAGAGGCACCCAAATCACAATCTCTTACCCGGAATTTGCCCTTCCTGTCTTACAGAAAAGCTTCAACAATTCCATCAATCTTCTATTTATTCCGATTCTCATTCGACCACCTTCTCTTCTTCTTCTTCCTCTTCCCTTCCTCACTCCTCTGAATTTTTCTTCTCCGCCGATTCCTCACACCGCCACCGCCGCCACCACCACCACCACCACCGTAGGAACGCCTCCGAGTTGGTCACTGGGTCGATGACCGCAGATTTGTTTGGGGACAAGCTGAAGAAGAGCGGCTCCATTAGGATCTCGGCAGATGGCGGCGCCGGGGCCAAAGGAGGAGGAAAGAAGAAACTTGGGTTTTGGTCCAGGTTGTTACTCCGCCCCAAGGCTTTCTATTTTCNTGCTTTACCACCACCACTACCAGAAGTACTATGA
Coding sequence (CDS)
ATGGGGAAATCGGAATCGGCGAAAGAATGCAAGAGGCACCCAAATCACAATCTCTTACCCGGAATTTGCCCTTCCTGTCTTACAGAAAAGCTTCAACAATTCCATCAATCTTCTATTTATTCCGATTCTCATTCGACCACCTTCTCTTCTTCTTCTTCCTCTTCCCTTCCTCACTCCTCTGAATTTTTCTTCTCCGCCGATTCCTCACACCGCCACCGCCGCCACCACCACCACCACCACCGTAGGAACGCCTCCGAGTTGGTCACTGGGTCGATGACCGCAGATTTGTTTGGGGACAAGCTGAAGAAGAGCGGCTCCATTAGGATCTCGGCAGATGGCGGCGCCGGGGCCAAAGGAGGAGGAAAGAAGAAACTTGGGTTTTGGTCCAGGTTGTTACTCCGCCCCAAGGCTTTCTATTTTCNTGCTTTACCACCACCACTACCAGAAGTACTATGA
Protein sequence
MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHSTTFSSSSSSSLPHSSEFFFSADSSHRHRRHHHHHHRRNASELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGGGKKKLGFWSRLLLRPKAFYFXALPPPLPEVL
Homology
BLAST of CaUC07G141040 vs. NCBI nr
Match:
XP_038900289.1 (uncharacterized protein LOC120087549 [Benincasa hispida])
HSP 1 Score: 206.5 bits (524), Expect = 1.7e-49
Identity = 114/133 (85.71%), Postives = 117/133 (87.97%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHSTTFSSSSSSSLPHSS 60
MGKSESAKECKRHPNHNLLPGICPSCL EKLQQFHQS + SDSHST FSSSSS SS
Sbjct: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPVCSDSHSTFFSSSSSP----SS 60
Query: 61 EFFFSADSSHRHRRHHHHHHRRNASELVTGSMTADLFGDKLKKSGSIRISADGGAGAK-G 120
+FFFSADSSHR RR HHRRNASE VTGSMTADLFGDK+KKSGSIRISADGGAGAK G
Sbjct: 61 DFFFSADSSHRRRR---QHHRRNASEFVTGSMTADLFGDKMKKSGSIRISADGGAGAKGG 120
Query: 121 GGKKKLGFWSRLL 133
GGKKKLGFWSRLL
Sbjct: 121 GGKKKLGFWSRLL 126
BLAST of CaUC07G141040 vs. NCBI nr
Match:
KAA0044717.1 (DUF740 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 202.6 bits (514), Expect = 2.4e-48
Identity = 114/140 (81.43%), Postives = 116/140 (82.86%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHSTTFSSSSSSSLPHSS 60
MGKSESAKECKRHPN+NLLPGICPSCL EKLQQFHQS YSDS S TFSS SSS SS
Sbjct: 1 MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQS-TFSSPSSS----SS 60
Query: 61 EFFFSADSSHRHRRHHHHHHRRNASELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGG 120
+FFFSADSS RHRR HHHRRNASE VTGSM DL DKLKKSGSIRISADGG GA
Sbjct: 61 DFFFSADSSRRHRR---HHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGGTGAGVK 120
Query: 121 GKKKLGFWSRLLLRPKAFYF 141
GKKKLGFWSRLLLRPKA YF
Sbjct: 121 GKKKLGFWSRLLLRPKALYF 132
BLAST of CaUC07G141040 vs. NCBI nr
Match:
XP_008453802.1 (PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo] >TYK16870.1 DUF740 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 113/140 (80.71%), Postives = 115/140 (82.14%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHSTTFSSSSSSSLPHSS 60
MGKSESAKECKRHPN+NLLPGICPSCL EKLQQFHQS YSDS S TFSS SSS SS
Sbjct: 1 MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQS-TFSSPSSS----SS 60
Query: 61 EFFFSADSSHRHRRHHHHHHRRNASELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGG 120
+FFFSADSS RHRR HHHRRNASE VTGSM DL DKLKKSGSIRISADG GA
Sbjct: 61 DFFFSADSSRRHRR---HHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVK 120
Query: 121 GKKKLGFWSRLLLRPKAFYF 141
GKKKLGFWSRLLLRPKA YF
Sbjct: 121 GKKKLGFWSRLLLRPKALYF 132
BLAST of CaUC07G141040 vs. NCBI nr
Match:
XP_031745668.1 (uncharacterized protein LOC116406103 [Cucumis sativus] >XP_031745670.1 uncharacterized protein LOC116406105 [Cucumis sativus] >KAE8637171.1 hypothetical protein CSA_018802 [Cucumis sativus])
HSP 1 Score: 199.5 bits (506), Expect = 2.0e-47
Identity = 112/140 (80.00%), Postives = 114/140 (81.43%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHSTTFSSSSSSSLPHSS 60
MGKSESAKECKRHPNHNLLPGICPSCL EKLQQFHQS YSDS S TFSS SSS SS
Sbjct: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQS-TFSSPSSS----SS 60
Query: 61 EFFFSADSSHRHRRHHHHHHRRNASELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGG 120
+FFFSADSS RHRR HHRRNASE VTGSM DL DKLKK+GSIRIS DGG GA
Sbjct: 61 DFFFSADSSRRHRR----HHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVK 120
Query: 121 GKKKLGFWSRLLLRPKAFYF 141
GKKKLGFWSRLLLRPKA YF
Sbjct: 121 GKKKLGFWSRLLLRPKALYF 131
BLAST of CaUC07G141040 vs. NCBI nr
Match:
XP_022985135.1 (uncharacterized protein LOC111483218, partial [Cucurbita maxima])
HSP 1 Score: 176.8 bits (447), Expect = 1.4e-40
Identity = 102/146 (69.86%), Postives = 109/146 (74.66%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSI--YSDSHSTTFSSSSSSSLPH 60
MGKSESAKECKRH NHN LPGICPSCL E+LQQ QSS YSDS ST SSSS
Sbjct: 56 MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSSINYSDSRST-----SSSSFLK 115
Query: 61 SSEFFFSADSSHRHRRHHHHHHRRNASELVTGSMTADLFGDKLKKSGSIRISADGGAGAK 120
SSE FFS ++S R R H RNASELVTGSM ADLFGDK+KKS SIRISADGG G
Sbjct: 116 SSESFFSGNTSWRRR------HTRNASELVTGSMAADLFGDKVKKSSSIRISADGGGGGG 175
Query: 121 GGGKKKLGFWSRLLLRPKAFYFXALP 145
GGGKKK+GFWSR L+RPKA YF + P
Sbjct: 176 GGGKKKVGFWSRFLVRPKALYFHSHP 190
BLAST of CaUC07G141040 vs. ExPASy TrEMBL
Match:
A0A5A7TS78 (DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004740 PE=4 SV=1)
HSP 1 Score: 202.6 bits (514), Expect = 1.2e-48
Identity = 114/140 (81.43%), Postives = 116/140 (82.86%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHSTTFSSSSSSSLPHSS 60
MGKSESAKECKRHPN+NLLPGICPSCL EKLQQFHQS YSDS S TFSS SSS SS
Sbjct: 1 MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQS-TFSSPSSS----SS 60
Query: 61 EFFFSADSSHRHRRHHHHHHRRNASELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGG 120
+FFFSADSS RHRR HHHRRNASE VTGSM DL DKLKKSGSIRISADGG GA
Sbjct: 61 DFFFSADSSRRHRR---HHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGGTGAGVK 120
Query: 121 GKKKLGFWSRLLLRPKAFYF 141
GKKKLGFWSRLLLRPKA YF
Sbjct: 121 GKKKLGFWSRLLLRPKALYF 132
BLAST of CaUC07G141040 vs. ExPASy TrEMBL
Match:
A0A5D3CZT1 (DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00010 PE=4 SV=1)
HSP 1 Score: 200.3 bits (508), Expect = 5.8e-48
Identity = 113/140 (80.71%), Postives = 115/140 (82.14%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHSTTFSSSSSSSLPHSS 60
MGKSESAKECKRHPN+NLLPGICPSCL EKLQQFHQS YSDS S TFSS SSS SS
Sbjct: 1 MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQS-TFSSPSSS----SS 60
Query: 61 EFFFSADSSHRHRRHHHHHHRRNASELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGG 120
+FFFSADSS RHRR HHHRRNASE VTGSM DL DKLKKSGSIRISADG GA
Sbjct: 61 DFFFSADSSRRHRR---HHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVK 120
Query: 121 GKKKLGFWSRLLLRPKAFYF 141
GKKKLGFWSRLLLRPKA YF
Sbjct: 121 GKKKLGFWSRLLLRPKALYF 132
BLAST of CaUC07G141040 vs. ExPASy TrEMBL
Match:
A0A1S3BWL8 (uncharacterized protein LOC103494420 OS=Cucumis melo OX=3656 GN=LOC103494420 PE=4 SV=1)
HSP 1 Score: 200.3 bits (508), Expect = 5.8e-48
Identity = 113/140 (80.71%), Postives = 115/140 (82.14%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHSTTFSSSSSSSLPHSS 60
MGKSESAKECKRHPN+NLLPGICPSCL EKLQQFHQS YSDS S TFSS SSS SS
Sbjct: 1 MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQS-TFSSPSSS----SS 60
Query: 61 EFFFSADSSHRHRRHHHHHHRRNASELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGG 120
+FFFSADSS RHRR HHHRRNASE VTGSM DL DKLKKSGSIRISADG GA
Sbjct: 61 DFFFSADSSRRHRR---HHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVK 120
Query: 121 GKKKLGFWSRLLLRPKAFYF 141
GKKKLGFWSRLLLRPKA YF
Sbjct: 121 GKKKLGFWSRLLLRPKALYF 132
BLAST of CaUC07G141040 vs. ExPASy TrEMBL
Match:
A0A0A0KZB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 9.9e-48
Identity = 112/140 (80.00%), Postives = 114/140 (81.43%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHSTTFSSSSSSSLPHSS 60
MGKSESAKECKRHPNHNLLPGICPSCL EKLQQFHQS YSDS S TFSS SSS SS
Sbjct: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQS-TFSSPSSS----SS 60
Query: 61 EFFFSADSSHRHRRHHHHHHRRNASELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGG 120
+FFFSADSS RHRR HHRRNASE VTGSM DL DKLKK+GSIRIS DGG GA
Sbjct: 61 DFFFSADSSRRHRR----HHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVK 120
Query: 121 GKKKLGFWSRLLLRPKAFYF 141
GKKKLGFWSRLLLRPKA YF
Sbjct: 121 GKKKLGFWSRLLLRPKALYF 131
BLAST of CaUC07G141040 vs. ExPASy TrEMBL
Match:
A0A6J1JAI6 (uncharacterized protein LOC111483218 OS=Cucurbita maxima OX=3661 GN=LOC111483218 PE=4 SV=1)
HSP 1 Score: 176.8 bits (447), Expect = 6.9e-41
Identity = 102/146 (69.86%), Postives = 109/146 (74.66%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSI--YSDSHSTTFSSSSSSSLPH 60
MGKSESAKECKRH NHN LPGICPSCL E+LQQ QSS YSDS ST SSSS
Sbjct: 56 MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSSINYSDSRST-----SSSSFLK 115
Query: 61 SSEFFFSADSSHRHRRHHHHHHRRNASELVTGSMTADLFGDKLKKSGSIRISADGGAGAK 120
SSE FFS ++S R R H RNASELVTGSM ADLFGDK+KKS SIRISADGG G
Sbjct: 116 SSESFFSGNTSWRRR------HTRNASELVTGSMAADLFGDKVKKSSSIRISADGGGGGG 175
Query: 121 GGGKKKLGFWSRLLLRPKAFYFXALP 145
GGGKKK+GFWSR L+RPKA YF + P
Sbjct: 176 GGGKKKVGFWSRFLVRPKALYFHSHP 190
BLAST of CaUC07G141040 vs. TAIR 10
Match:
AT1G22470.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72240.1); Has 1693 Blast hits to 236 proteins in 54 species: Archae - 0; Bacteria - 8; Metazoa - 451; Fungi - 116; Plants - 94; Viruses - 2; Other Eukaryotes - 1022 (source: NCBI BLink). )
HSP 1 Score: 41.2 bits (95), Expect = 8.6e-04
Identity = 28/67 (41.79%), Postives = 37/67 (55.22%), Query Frame = 0
Query: 10 CKRHPNHNLLPGICPSCLTEKLQQF------HQSSIYSDSHSTTFSSSSSSSLPHSSEFF 69
CK+HP H PGIC CL E L + + SS+ S S + T SS SS+S S+F
Sbjct: 41 CKKHPKHRQSPGICSLCLNESLSKLSSEFYDYSSSMSSSSLAKTMSSCSSASSESESDFS 100
Query: 70 FSADSSH 71
+A SS+
Sbjct: 101 STAISSY 107
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038900289.1 | 1.7e-49 | 85.71 | uncharacterized protein LOC120087549 [Benincasa hispida] | [more] |
| KAA0044717.1 | 2.4e-48 | 81.43 | DUF740 domain-containing protein [Cucumis melo var. makuwa] | [more] |
| XP_008453802.1 | 1.2e-47 | 80.71 | PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo] >TYK16870.1 DUF74... | [more] |
| XP_031745668.1 | 2.0e-47 | 80.00 | uncharacterized protein LOC116406103 [Cucumis sativus] >XP_031745670.1 uncharact... | [more] |
| XP_022985135.1 | 1.4e-40 | 69.86 | uncharacterized protein LOC111483218, partial [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TS78 | 1.2e-48 | 81.43 | DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... | [more] |
| A0A5D3CZT1 | 5.8e-48 | 80.71 | DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
| A0A1S3BWL8 | 5.8e-48 | 80.71 | uncharacterized protein LOC103494420 OS=Cucumis melo OX=3656 GN=LOC103494420 PE=... | [more] |
| A0A0A0KZB2 | 9.9e-48 | 80.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1 | [more] |
| A0A6J1JAI6 | 6.9e-41 | 69.86 | uncharacterized protein LOC111483218 OS=Cucurbita maxima OX=3661 GN=LOC111483218... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G22470.1 | 8.6e-04 | 41.79 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
