CaUC07G141000 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G141000
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	polyadenylate-binding protein-interacting protein 12
Location	Ciama_Chr07: 31919774 .. 31926999 (-)
RNA-Seq Expression	CaUC07G141000
Synteny	CaUC07G141000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTCCCTGAAATATGTTGAGAGGAAGGGGAAGGAGGCGTACGAAAAGATTCATCTCATCGCTCATTTCTGGGATGCTGTGAAACCCAAAGCCAAAGCCACTCCACCGCAATCCGACGATCTCAACGCCGGCCAAACCAACGTACACACTCCTAATCCTTCTCTCTCTCTCTCTACACTAATTTACCAATCCATCATCGCCCCTTTCGCATTTTTTATTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTTNGTAACATTTTGTAATATTTATAATTATTTTCAATAGTTTTTCCATATTTAAAAACATCTCTATATTTAATCACCATTATATGAACCAATGTTTGAAATATCAATGTGGATGAAAATATTGAGGTCTTGATTTTATGGAAATATTGATATCGATGGAAATTTCAGGAAACTTTATGGAAATTAATGGAAATTGATGAAAATTGTTATAATTAATTAATGAAACTTTGATTGTGGCTTAATTAGACTATAACTAACCATTTTTAATCATCATTTCTATAAAGTAAAAGAACATTTAGATGTATATTGTAGGTAAATGTCGATGCAAGCGTATAAATTTTAAAAAAGAAATGGAATATTATTACAAAATAATATCAAATATTGGTAATTAATTGCAAAATTAAAGGAGATAAAATGTTTTTATACAAAATAATTATTAATTGTTTATTATAAAATGTATATGTCTAATACCAAAACATGACCTTGGAGCAATTCAATTTTGAGGTGAAATGATGTGAAAATTCAATGGAATAGGTTTGAATAAAGTTAAAAATAAATATATGTTATTTTTCTTAATTTTATTTTTTTGGAAATGAAAGCTTTGGATGGAAAAAAATAATAATAAAACTTACATCGGTTCAATTTTGAGGTGAAATGATGTGAAACTAAAAATAAATATATGTTTATTTTCCTCAATTTTGGTTTCTTGAAAATCAACATTTTGGATGGTAAAAACTTCCATTGAGCGGCTAGCATAGCTAATTGCTAAAAAAAAAAATCAAAATTTCGATGAAATTTTGAGAAATTCGGGGAAAATCGAAATTCCCCTTTGTTGAGATTTTGACCAAAATTTTACACTATGATATGAACCTCTTGGCAAAAATATATATAAACTATCAAAAGGTTACATTAATACTCTTAATCTAAAAAAAAAAGTTAAAAAAAAATCTTTACCGTTTATCTACACTTTATCACCTTCCCTCCTCCATTTCCTTTTTCTTTGATAATAGAGGAAACTGAGACTTCGCCTCTTTCTCTCTAACTTTTGTTAATTCGCACAGAGGGTTTCTCGTTTTCATTTCGATCCTCTTCAATTTCGTTTCTGCTCTCTTACTTCTTCCACTCCACGATCTCTTGCTGGGTTTCCTCGTTTACCAATGGAAATGTATTGATATGCCCTTCCCACCCTCTTCAGGTAACACGCAACCACTTCCTTCTTTTTCTTTTTTCTTTCTACGCCGACGGATATCTTGATCATACGATTCATTTTATTTTTCAGAATAAGATTGCAAAAACAACGATCTTCTTGCATAAACTTGTCTCTCATCATGGCGGTTGCTGAGAATGTTGGACCTAAAATCGGCTCTCCAAGTCAAACTCTGGAAAATACCATGCTTTCCTCCGATTCTAATGACCCTAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTACGCTTCCGATGAATGCAGAATCCGACTTTCATCCCAACGCCAATGATCAGAATATACAGAAGAAGCCACATCTTCAGGAGAGAGCTGCTGCCGCAACTTCTTTTTCACTTCCTTCGCCCAATTTCAACGCCCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGGTCAGTCGTTGATGGTGAAGTCTGCTTCTGGTTATGGGATGAATCAGATGCCTAATGGAGTCATAAATGGAGCCGATGGAGGGGAAAACTTTAAAAGAGATATGAGGGATCTGGAGGAGTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCATTAGCCAAAAACTTTTCTGGTTACTTCAGCGGTGCTGGCCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGCCAACAACGAAGGGAATAATAGTCGAAGGGTATGTGGAGATGTTTGTTTTGTTCAAAGATGTGAAAGTTTGTTTGCACTTATTATTAACCTTTGAATGCCCTGCACTTTGTTTGATTTCTGGAGAACCAGACCCCTCAGACTTAACATGCCTGATGGATTTGTCGGGTGAAAGTGTTGGAGTTTATATATTTTCCGGTGTTCTTTTTTAAGTGCTGTGAACCTGCTATAAGAGTATTATTTGATTGCACATTTTAGTACTAGTGGACTTTTGAGAAATCTGTTCTATATCTTTTATTTATGTTGCATAATCTCATAGTGATTTGTATTTTTTTTTTCTTTTCCTTTTTCTCTATTCGTTTTGCTTAGAAGAAGAATGGTTTTAGTCAAGGGAGACGGAGGATGAATAATAAGATGAATGCGGTGAAGCGAGATGAGATGACCCGAAGGACGGTGTATGTATCAGACATTGATCAGCAGGTAAGAGGCCTCCACCCCCAAACTCTCCTGCTTATGTGCCTTGCCTTGTCCTTTTTTACCTATTCATTTTTTGGATCATGGAAATGCATTGTAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTGAATGGTTATTCTCTTTTTCTCCATTTGATATGATTATTGGCATCTTACTGCTAGCTTAATGTTGTCTTTTTCAATAGGTTGTTGACTGTCGTATCTGTGGTGATCCAAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGGTACAATCCCAATTCTGTATATTGATAGATGCATTTCCTACTTGATATCATGTTTAATTTACTTCGTGCTTGCAGAGGGTGCACGGGCTTCCTTGAATCTTTCAGGCACAGTGCTTGGTTTCTATCCAGTCAGAGTGCTGCCCTCGAAAACTGCAATAGCACCAGTCAATCCTGACTTCTTACCCAGGGTAATTGGCTGCCCTCAATGGCATTCATCTATTTTTACTACATTCTAATTTGTTGTTAGCTATGCTATCAACTCATTTTAATTTATTCTACTTCTCTTGAAATTGGCTTTCTTGTGTTTTATTGTTTCTAGTCGGATGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTAGGTTTGGAAGTGGAAAATCTCTGAATGTATTTGAGAACTGTGTTTTTGGAAGAGGAGAAGATGAAAGAACTTCAATATTGTCGATTGCTATATTGATTGTTTTCATGTCATGCAGGTTACTCAAGCAGAGGTCAAGCTATTCTTTGAATCACTATGTGGAGAGGTTTGCACTTTCTCAACAGATGTCGTATTTCTTCAAACTTTTATTAGATTCTCTTTACGGTGCTTTCATATTATCTGGTTGACTTCATCCATGTCATCTGTTAAACCCTGTGTAGGTTCAGCGTCTTAGGCTACTTGGAGATTATCATCATTCCACACGTATAGCCTTTGTTGAGTTTACAATGGTAATCCTGTTCTTTTCCATTGATTTTGTTGCTTTTTTCTAACCTTTCCTCCTGCCATGTTTATACCTCTCTCTCTCTCTCTCTCTTTTTTTTGGGGGGGGGGGGGGGGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGTTTAAGGGTGGATGTGGTAGTCTGTTGTGGTTCTTGTACTCTTACCATTCTCCCTCACCAGTACATTTCTGGGTTGCTGGGGTTTAGAATGCATCTACAGTACCTGCTGTACGTATCATATCTATCAGTAATAATGGATGTGGTTTTCCTTATCAACCAGTCTGTTGTGGTTCTTGTATTTGCCATTGACCAATACATCTTTGCTTTTGTGGTGTCAAGAATGAATCTAGAGTACGTGCTTCACATATTTTATCTTTCAGTAAACTTCACTTGATTGATGTCTTTAAGGTTCATTTCACTGCTGTCGAGCAATGTCAAATATCGTTGCAATGCATGCTTCATCTTCTATAATCATCTAATATATGTTCATTTTCCTTTGAGTGACTCTAGTGTTTCATGTTTGTGAATAACAAAGCATTAGCTATGCCCTAAAAGTCTTTTTGGAGAACAGTGGTGTTTACCCATGTAGTTGCACGAATGTTTACCTGTGCAGTCACATGAATGTTATCGTGTTTGGCTGTAACCACCTCTCCATAGCTTTGTATGAAAGTGTGTGCATTCGTTTTTAATTTGCAGGCTGAGAGTGCAATTGCTGCGCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGTTATTATAGCTCATTCTTGTTTCCTTTTCTGTTATTGGGTATTTTGAAAAATTGTGTTTTCGTTTTGAAAGCCATAACAATTCTGTCTCTTATGGGTTCATTTTCAGGGTGAGCCCGTCAAAGACTCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGAATGCTCCCTGCATCCATCCCATGTTGGTCTGGTGCTCGATAGATATATTTATATATATTGCATATATATATATTATGGTTATAGAGATATGTTCAGAAGGGATTGTGGGCTTTGGTGATGCATGGATCCTCTGCAGTGGAGTTGGTACCTTTTTGTACCTTGAACTAGGTGTTGTTGGTGAATGACATATTTGTTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGTAATAATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAGAGTGGATGGCATTTTGAGGCTGTTAGTCGTTTATCTCTGATGATGTTATGGTGGATGCACCGGTGGATTCTGTAGGGTTGGTCCCTGGGAACACTTGAAACTTTCTTTCAATGTTTCTAACTGGAAACTGTTAATCAACTCTCCGCTCTTTAGTCCCTTCCTTGAGTCTTGCATCATCTGCACTCTGGATGCTCTCTGTTTATTTTGTTCATTCTTCTGCTGCTGCATATATAGTATATAGAATGACCTTGAACCTGAACCGGATTTTTGTACTTGTCTTTGAGTTCAGCCTGCCCGTGTTGAAGGTTTCCATTATTGTTCTCTTTCCAACAGCTGAATCGTTTGGTGGTTTGGAATATGTGGAGATGTGTGTTGATGTTAAAAACTTGATCTTTGTTTTTTGTTGAATGGCTTGGTCAAAGGAATATACACCATTGGTATTTTCGTTGAAGTTAAGAAAAATGAAAAGTTTGATCAAGGTCGGCAGGCAATTCTGTTTGGCTCCACGGGAACTCTACATTACTAAGACTAATCCTTTCTTAATTTGCTGAGGCTTTTTGGTTGGTTTCTTCTTCATCCATTGCTAAAATTATGCCTTAAATGGATCTCTTGTTTGTGAGACTAGTTGTAATTATCAATGTTTTTGTTTGATTCTCGAATATGTTTAAACAGAGTCAGAATTTGAGTTTGATGGAAGGTTTTTTGAGGGAGAAAAAACAGGAATAAAGAATAAAGAAGGAATAAAGAGAAGCCAACAGAAAGAGAGGAGAAGACAAAGGCAAAAAAAGACAAAAAGGGAGGGATGTGGGGCTAATCTAGAGGGAGAGGGTAAGGAGGAAAATGGTTGGGTTATATTGTTAGAAAGAG

mRNA sequence

GTGTCCCTGAAATATGTTGAGAGGAAGGGGAAGGAGGCGTACGAAAAGATTCATCTCATCGCTCATTTCTGGGATGCTGTGAAACCCAAAGCCAAAGCCACTCCACCGCAATCCGACGATCTCAACGCCGGCCAAACCAACAATAAGATTGCAAAAACAACGATCTTCTTGCATAAACTTGTCTCTCATCATGGCGGTTGCTGAGAATGTTGGACCTAAAATCGGCTCTCCAAGTCAAACTCTGGAAAATACCATGCTTTCCTCCGATTCTAATGACCCTAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTACGCTTCCGATGAATGCAGAATCCGACTTTCATCCCAACGCCAATGATCAGAATATACAGAAGAAGCCACATCTTCAGGAGAGAGCTGCTGCCGCAACTTCTTTTTCACTTCCTTCGCCCAATTTCAACGCCCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGGTCAGTCGTTGATGGTGAAGTCTGCTTCTGGTTATGGGATGAATCAGATGCCTAATGGAGTCATAAATGGAGCCGATGGAGGGGAAAACTTTAAAAGAGATATGAGGGATCTGGAGGAGTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCATTAGCCAAAAACTTTTCTGGTTACTTCAGCGGTGCTGGCCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGCCAACAACGAAGGGAATAATAGTCGAAGGAAGAAGAATGGTTTTAGTCAAGGGAGACGGAGGATGAATAATAAGATGAATGCGGTGAAGCGAGATGAGATGACCCGAAGGACGGTGTATGTATCAGACATTGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTTGTTGACTGTCGTATCTGTGGTGATCCAAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGAGGGTGCACGGGCTTCCTTGAATCTTTCAGGCACAGTGCTTGGTTTCTATCCAGTCAGAGTGCTGCCCTCGAAAACTGCAATAGCACCAGTCAATCCTGACTTCTTACCCAGGTCGGATGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTATTCTTTGAATCACTATGTGGAGAGGTTCAGCGTCTTAGGCTACTTGGAGATTATCATCATTCCACACGTATAGCCTTTGTTGAGTTTACAATGTACATTTCTGGGTTGCTGGGGTTTAGAATGCATCTACAGTACCTGCTGTACGTATCATATCTATCAGTAATAATGGATGTGGTTTTCCTTATCAACCAGTCTGTTGTGGTTCTTGTATTTGCCATTGACCAATACATCTTTGCTTTTGTGGTGTCAAGAATGAATCTAGAGTACGTGCTTCACGCTGAGAGTGCAATTGCTGCGCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTGAGCCCGTCAAAGACTCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGAATGCTCCCTGCATCCATCCCATGTTGGTCTGGTGCTCGATAGATATATTTATATATATTGCATATATATATATTATGGTTATAGAGATATGTTCAGAAGGGATTGTGGGCTTTGGTGATGCATGGATCCTCTGCAGTGGAGTTGGTACCTTTTTGTACCTTGAACTAGAGTGGATGGCATTTTGAGGCTGTTAGTCGTTTATCTCTGATGATGTTATGGTGGATGCACCGGTGGATTCTGTAGGGTTGGTCCCTGGGAACACTTGAAACTTTCTTTCAATGTTTCTAACTGGAAACTGTTAATCAACTCTCCGCTCTTTAGTCCCTTCCTTGAGTCTTGCATCATCTGCACTCTGGATGCTCTCTGTTTATTTTGTTCATTCTTCTGCTGCTGCATATATAGTATATAGAATGACCTTGAACCTGAACCGGATTTTTGTACTTGTCTTTGAGTTCAGCCTGCCCGTGTTGAAGGTTTCCATTATTGTTCTCTTTCCAACAGCTGAATCGTTTGGTGGTTTGGAATATGTGGAGATGTGTGTTGATGTTAAAAACTTGATCTTTGTTTTTTGTTGAATGGCTTGGTCAAAGGAATATACACCATTGGTATTTTCGTTGAAGTTAAGAAAAATGAAAAGTTTGATCAAGGTCGGCAGGCAATTCTGTTTGGCTCCACGGGAACTCTACATTACTAAGACTAATCCTTTCTTAATTTGCTGAGGCTTTTTGGTTGGTTTCTTCTTCATCCATTGCTAAAATTATGCCTTAAATGGATCTCTTGTTTGTGAGACTAGTTGTAATTATCAATGTTTTTGTTTGATTCTCGAATATGTTTAAACAGAGTCAGAATTTGAGTTTGATGGAAGGTTTTTTGAGGGAGAAAAAACAGGAATAAAGAATAAAGAAGGAATAAAGAGAAGCCAACAGAAAGAGAGGAGAAGACAAAGGCAAAAAAAGACAAAAAGGGAGGGATGTGGGGCTAATCTAGAGGGAGAGGGTAAGGAGGAAAATGGTTGGGTTATATTGTTAGAAAGAG

Coding sequence (CDS)

ATGGCGGTTGCTGAGAATGTTGGACCTAAAATCGGCTCTCCAAGTCAAACTCTGGAAAATACCATGCTTTCCTCCGATTCTAATGACCCTAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTACGCTTCCGATGAATGCAGAATCCGACTTTCATCCCAACGCCAATGATCAGAATATACAGAAGAAGCCACATCTTCAGGAGAGAGCTGCTGCCGCAACTTCTTTTTCACTTCCTTCGCCCAATTTCAACGCCCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGGTCAGTCGTTGATGGTGAAGTCTGCTTCTGGTTATGGGATGAATCAGATGCCTAATGGAGTCATAAATGGAGCCGATGGAGGGGAAAACTTTAAAAGAGATATGAGGGATCTGGAGGAGTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCATTAGCCAAAAACTTTTCTGGTTACTTCAGCGGTGCTGGCCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGCCAACAACGAAGGGAATAATAGTCGAAGGAAGAAGAATGGTTTTAGTCAAGGGAGACGGAGGATGAATAATAAGATGAATGCGGTGAAGCGAGATGAGATGACCCGAAGGACGGTGTATGTATCAGACATTGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTTGTTGACTGTCGTATCTGTGGTGATCCAAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGAGGGTGCACGGGCTTCCTTGAATCTTTCAGGCACAGTGCTTGGTTTCTATCCAGTCAGAGTGCTGCCCTCGAAAACTGCAATAGCACCAGTCAATCCTGACTTCTTACCCAGGTCGGATGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTATTCTTTGAATCACTATGTGGAGAGGTTCAGCGTCTTAGGCTACTTGGAGATTATCATCATTCCACACGTATAGCCTTTGTTGAGTTTACAATGTACATTTCTGGGTTGCTGGGGTTTAGAATGCATCTACAGTACCTGCTGTACGTATCATATCTATCAGTAATAATGGATGTGGTTTTCCTTATCAACCAGTCTGTTGTGGTTCTTGTATTTGCCATTGACCAATACATCTTTGCTTTTGTGGTGTCAAGAATGAATCTAGAGTACGTGCTTCACGCTGAGAGTGCAATTGCTGCGCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTGAGCCCGTCAAAGACTCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGA

Protein sequence

MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQNIQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVINGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNLEYVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN

Homology

[Close]

BLAST of CaUC07G141000 vs. NCBI nr
Match: XP_038900938.1 (polyadenylate-binding protein-interacting protein 12 [Benincasa hispida])

HSP 1 Score: 737.6 bits (1903), Expect = 6.4e-209
Identity = 390/463 (84.23%), Postives = 395/463 (85.31%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+LENTM+SSDSNDPKDVENQKPKNDSTLPMNAE DFHPNANDQN
Sbjct: 1   MAVAENVGPKIGSPSQSLENTMVSSDSNDPKDVENQKPKNDSTLPMNAEPDFHPNANDQN 60

Query: 61  IQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVI 120
           +QKK HLQERAAAATSFSLPSPNF AQMGQMQNGFETNGQSLMVKSASGYGMNQ PNGVI
Sbjct: 61  MQKKVHLQERAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANS 180
           NGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF GAGLGYT+DFLLQANS
Sbjct: 121 NGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTSDFLLQANS 180

Query: 181 ANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 240
            NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC
Sbjct: 181 VNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNLE 420
           FTM                                                         
Sbjct: 361 FTM--------------------------------------------------------- 402

Query: 421 YVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 464
               AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 421 ----AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of CaUC07G141000 vs. NCBI nr
Match: XP_004137206.1 (polyadenylate-binding protein-interacting protein 12 [Cucumis sativus] >XP_011653324.1 polyadenylate-binding protein-interacting protein 12 [Cucumis sativus] >KGN53617.1 hypothetical protein Csa_014431 [Cucumis sativus])

HSP 1 Score: 713.0 bits (1839), Expect = 1.7e-201
Identity = 379/464 (81.68%), Postives = 388/464 (83.62%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQTL+NT++SSDSNDP  VENQKP NDSTLP+NA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKPHLQERAAAATSFSLPSPNFNAQM-GQMQNGFETNGQSLMVKSASGYGMNQMPNGV 120
           +QKK HLQ+RAAAATSFSLPSPNF  QM GQMQNGFETN QSLMV SAS YGMNQ PNGV
Sbjct: 61  LQKKVHLQDRAAAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQAN 180
           INGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF+GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
           DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNL 420
           EFTM                                                        
Sbjct: 361 EFTM-------------------------------------------------------- 403

Query: 421 EYVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 464
                AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 421 -----AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of CaUC07G141000 vs. NCBI nr
Match: XP_008462907.1 (PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis melo])

HSP 1 Score: 711.4 bits (1835), Expect = 4.9e-201
Identity = 378/464 (81.47%), Postives = 387/464 (83.41%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQTL+NT++SSDSNDP  VENQKP NDSTLP+NA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKPHLQERAAAATSFSLPSPNFNAQM-GQMQNGFETNGQSLMVKSASGYGMNQMPNGV 120
           +QKK HLQ+RA AATSFSLPSPNF  QM GQMQNGFETN QSLMV SAS YGMNQ PNGV
Sbjct: 61  LQKKVHLQDRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQAN 180
           INGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF+GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
           DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNL 420
           EFTM                                                        
Sbjct: 361 EFTM-------------------------------------------------------- 403

Query: 421 EYVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 464
                AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 421 -----AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of CaUC07G141000 vs. NCBI nr
Match: TYK04620.1 (polyadenylate-binding protein-interacting protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 710.7 bits (1833), Expect = 8.3e-201
Identity = 378/464 (81.47%), Postives = 386/464 (83.19%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQTL+NT++SSDSNDP  VENQKP NDSTLP+NA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKPHLQERAAAATSFSLPSPNFNAQM-GQMQNGFETNGQSLMVKSASGYGMNQMPNGV 120
           +QKK HLQ RA AATSFSLPSPNF  QM GQMQNGFETN QSLMV SAS YGMNQ PNGV
Sbjct: 61  LQKKVHLQHRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQAN 180
           INGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF+GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
           DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNL 420
           EFTM                                                        
Sbjct: 361 EFTM-------------------------------------------------------- 403

Query: 421 EYVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 464
                AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 421 -----AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of CaUC07G141000 vs. NCBI nr
Match: XP_022984928.1 (polyadenylate-binding protein-interacting protein 12 [Cucurbita maxima] >XP_022984929.1 polyadenylate-binding protein-interacting protein 12 [Cucurbita maxima])

HSP 1 Score: 710.3 bits (1832), Expect = 1.1e-200
Identity = 375/463 (80.99%), Postives = 385/463 (83.15%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+ ENTMLSSDSNDPKDVENQKPKNDS + +NAE DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMLSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 61  IQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVI 120
            QKK HLQERAAAA SF+LPSPNF +QMGQMQNGFETN QSLMVKSA GYGMNQ PNGVI
Sbjct: 61  TQKKAHLQERAAAAASFALPSPNFKSQMGQMQNGFETNAQSLMVKSAGGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANS 180
           NGADGGENFKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYF GA LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 181 ANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 240
            NNEGNN+RRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNLE 420
           FTM                                                         
Sbjct: 361 FTM--------------------------------------------------------- 402

Query: 421 YVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 464
               AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 421 ----AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of CaUC07G141000 vs. ExPASy Swiss-Prot
Match: Q9LPI5 (Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=3702 GN=CID11 PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 9.9e-104
Identity = 207/345 (60.00%), Postives = 236/345 (68.41%), Query Frame = 0


Query: 121 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKN-----FSGYFSGAGLGYTND-F 180
           +G DGGE+FKRDMR+L+EL SKLNPMAEEFVPPSL K        G+F+ AG  + N+ F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 181 LLQANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 240
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 241 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 300
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 301 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 360
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 361 RIAFVEFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVV 420
           RIAFVEF M                                                   
Sbjct: 311 RIAFVEFVM--------------------------------------------------- 354

Query: 421 SRMNLEYVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 460
                     AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 371 ----------AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of CaUC07G141000 vs. ExPASy Swiss-Prot
Match: Q9S7N9 (Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=3702 GN=CID12 PE=1 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.1e-99
Identity = 207/386 (53.63%), Postives = 249/386 (64.51%), Query Frame = 0


Query: 79  LPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVINGADGGENFKRDMRDLEE 138
           L SP+  + +   ++G  +N          G G++      +  +DGGE+FKRDMR+L E
Sbjct: 18  LISPSPPSSVTSQESGASSNNDH------GGNGIHDEIGVHVARSDGGESFKRDMRELHE 77

Query: 139 LLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANSANNEGNNSRRKKNGFSQG 198
           LLSKLNPMA+EF+PPSL K     F+G      N F+   N   NE  + RRKK+   QG
Sbjct: 78  LLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQG 137

Query: 199 RRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHF 258
           +RRMN + +  +R+E+ RRTVYVSDIDQQVTEE LA +F   G+VVDCRICGDPNS+L F
Sbjct: 138 KRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRF 197

Query: 259 AFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYC 318
           AFIEFTDE GAR +LNLSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYC
Sbjct: 198 AFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYC 257

Query: 319 TNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMYISGLLGFRMHLQYL 378
           TNIDKK+TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF M               
Sbjct: 258 TNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVM--------------- 317

Query: 379 LYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNLEYVLHAESAIAALNCSGVV 438
                                                         AESAIAALNCSGV+
Sbjct: 318 ----------------------------------------------AESAIAALNCSGVL 336

Query: 439 LGSLPIRVSPSKTPVRPRS-PRAQLN 464
           LGSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 378 LGSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of CaUC07G141000 vs. ExPASy Swiss-Prot
Match: Q9SG10 (Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=3702 GN=CID10 PE=2 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 5.2e-97
Identity = 219/465 (47.10%), Postives = 276/465 (59.35%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSND----PKDVENQKPKNDSTLPMNAESDFHPNA 60
           MAVAEN G K+ S  Q L+N   ++ + +    P   ++Q PK+DS+ P+  +S   P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDST--PET 60

Query: 61  NDQNIQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMP 120
           +D+                       N  AQ  Q  NGF  NG+             +  
Sbjct: 61  DDR----------------------INETAQKVQTLNGFSGNGE-------------RDN 120

Query: 121 NGVINGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLL 180
           NG             +++DL +  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 NG-------------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFAA 180

Query: 181 QANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 240
               A+   +  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 241 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 300
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 301 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 361 AFVEFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSR 420
           AFVEF M                                                     
Sbjct: 361 AFVEFAM----------------------------------------------------- 351

Query: 421 MNLEYVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 462
                   AESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 421 --------AESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of CaUC07G141000 vs. ExPASy Swiss-Prot
Match: Q9LRR6 (Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3702 GN=CID9 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.6e-77
Identity = 165/335 (49.25%), Postives = 207/335 (61.79%), Query Frame = 0


Query: 132 DMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGY-TNDFLLQANSANNE------ 191
           DM  L  +  KLNP+A+EF P       +   + A      +DF      +  E      
Sbjct: 49  DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAKANQFLPADDFETTKKQSGEEFDLDAK 108

Query: 192 GNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVV 251
            +++ RK+  +SQGRRR+  +++  +R++  RRTVYVSDIDQ VTEE LA +F++CG+VV
Sbjct: 109 KDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVV 168

Query: 252 DCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPR 311
           DCRICGDP+S+L FAF+EF D++GA  +L+L GT+LGFYPVRVLPSKTAI PVNP FLPR
Sbjct: 169 DCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPR 228

Query: 312 SDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMY 371
           S+DEREMC+RTIYCTNIDKKV+QA+V+ FFES CGEV RLRLLGD  HSTRIAFVEF + 
Sbjct: 229 SEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFAL- 288

Query: 372 ISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNLEYVLH 431
                                                                       
Sbjct: 289 ------------------------------------------------------------ 322

Query: 432 AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 460
           A+SA++ALNCSG+V+GS PIRVSPSKTPVRPR  R
Sbjct: 349 ADSALSALNCSGMVVGSQPIRVSPSKTPVRPRITR 322

[Close]

BLAST of CaUC07G141000 vs. ExPASy Swiss-Prot
Match: Q9C8M0 (Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3702 GN=CID8 PE=1 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.7e-77
Identity = 164/332 (49.40%), Postives = 207/332 (62.35%), Query Frame = 0


Query: 133 MRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANSANNEGNN---SR 192
           M+ L  +  KLNP A+EF  PS  +N            ++DF++    +  +      +R
Sbjct: 50  MKKLVAMFKKLNPEAKEFF-PSYKRN---------TNQSDDFVIAIKPSGEDNKKVAINR 109

Query: 193 RKKNGFSQGRR-RMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRI 252
           R++N ++QGRR R+  + +  +R++  RRTVYVSDIDQ VTEE LA +F+SCG+VVDCRI
Sbjct: 110 RRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 169

Query: 253 CGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDE 312
           CGDPNS+L FAF+EF+D++GAR++L+L GT++G+YPVRVLPSKTAI PVNP FLPRS+DE
Sbjct: 170 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 229

Query: 313 REMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMYISGL 372
           REMCSRTIYCTN+DK  T+ +V  FF+S CGEV RLRLLGD  HSTRIAFVEF M     
Sbjct: 230 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAM----- 289

Query: 373 LGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNLEYVLHAESA 432
                                                                   AESA
Sbjct: 290 --------------------------------------------------------AESA 310

Query: 433 IAALNCSGVVLGSLPIRVSPSKTPVRPRSPRA 461
           +AALNCSG+VLGS PIRVSPSKTPVR R  R+
Sbjct: 350 VAALNCSGIVLGSQPIRVSPSKTPVRSRITRS 310

[Close]

BLAST of CaUC07G141000 vs. ExPASy TrEMBL
Match: A0A0A0KZ10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G090360 PE=4 SV=1)

HSP 1 Score: 713.0 bits (1839), Expect = 8.1e-202
Identity = 379/464 (81.68%), Postives = 388/464 (83.62%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQTL+NT++SSDSNDP  VENQKP NDSTLP+NA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKPHLQERAAAATSFSLPSPNFNAQM-GQMQNGFETNGQSLMVKSASGYGMNQMPNGV 120
           +QKK HLQ+RAAAATSFSLPSPNF  QM GQMQNGFETN QSLMV SAS YGMNQ PNGV
Sbjct: 61  LQKKVHLQDRAAAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQAN 180
           INGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF+GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
           DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNL 420
           EFTM                                                        
Sbjct: 361 EFTM-------------------------------------------------------- 403

Query: 421 EYVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 464
                AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 421 -----AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of CaUC07G141000 vs. ExPASy TrEMBL
Match: A0A1S3CI01 (polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo OX=3656 GN=LOC103501175 PE=4 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 2.4e-201
Identity = 378/464 (81.47%), Postives = 387/464 (83.41%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQTL+NT++SSDSNDP  VENQKP NDSTLP+NA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKPHLQERAAAATSFSLPSPNFNAQM-GQMQNGFETNGQSLMVKSASGYGMNQMPNGV 120
           +QKK HLQ+RA AATSFSLPSPNF  QM GQMQNGFETN QSLMV SAS YGMNQ PNGV
Sbjct: 61  LQKKVHLQDRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQAN 180
           INGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF+GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
           DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNL 420
           EFTM                                                        
Sbjct: 361 EFTM-------------------------------------------------------- 403

Query: 421 EYVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 464
                AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 421 -----AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of CaUC07G141000 vs. ExPASy TrEMBL
Match: A0A5D3BZR3 (Polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold351G00260 PE=4 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 4.0e-201
Identity = 378/464 (81.47%), Postives = 386/464 (83.19%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQTL+NT++SSDSNDP  VENQKP NDSTLP+NA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKPHLQERAAAATSFSLPSPNFNAQM-GQMQNGFETNGQSLMVKSASGYGMNQMPNGV 120
           +QKK HLQ RA AATSFSLPSPNF  QM GQMQNGFETN QSLMV SAS YGMNQ PNGV
Sbjct: 61  LQKKVHLQHRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQAN 180
           INGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF+GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
           DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNL 420
           EFTM                                                        
Sbjct: 361 EFTM-------------------------------------------------------- 403

Query: 421 EYVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 464
                AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 421 -----AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of CaUC07G141000 vs. ExPASy TrEMBL
Match: A0A6J1JC04 (polyadenylate-binding protein-interacting protein 12 OS=Cucurbita maxima OX=3661 GN=LOC111483053 PE=4 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 5.3e-201
Identity = 375/463 (80.99%), Postives = 385/463 (83.15%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+ ENTMLSSDSNDPKDVENQKPKNDS + +NAE DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMLSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 61  IQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVI 120
            QKK HLQERAAAA SF+LPSPNF +QMGQMQNGFETN QSLMVKSA GYGMNQ PNGVI
Sbjct: 61  TQKKAHLQERAAAAASFALPSPNFKSQMGQMQNGFETNAQSLMVKSAGGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANS 180
           NGADGGENFKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYF GA LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 181 ANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 240
            NNEGNN+RRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNLE 420
           FTM                                                         
Sbjct: 361 FTM--------------------------------------------------------- 402

Query: 421 YVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 464
               AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 421 ----AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of CaUC07G141000 vs. ExPASy TrEMBL
Match: A0A6J1E992 (polyadenylate-binding protein-interacting protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111430559 PE=4 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 5.3e-201
Identity = 375/463 (80.99%), Postives = 386/463 (83.37%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+ ENTM+SSDSNDPKDVENQKPKNDS + +NAE DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 61  IQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVI 120
            QKK HLQERAAAATSF+LPSPNF AQMGQMQNGFETN QSLMVKSA+ YGMNQ PNGVI
Sbjct: 61  TQKKAHLQERAAAATSFALPSPNFKAQMGQMQNGFETNAQSLMVKSAAAYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANS 180
           NGADGGENFKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYF GA LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 181 ANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 240
            NNEGNN+RRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNLE 420
           FTM                                                         
Sbjct: 361 FTM--------------------------------------------------------- 402

Query: 421 YVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 464
               AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 421 ----AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of CaUC07G141000 vs. TAIR 10
Match: AT1G32790.1 (CTC-interacting domain 11 )

HSP 1 Score: 378.6 bits (971), Expect = 7.0e-105
Identity = 207/345 (60.00%), Postives = 236/345 (68.41%), Query Frame = 0


Query: 121 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKN-----FSGYFSGAGLGYTND-F 180
           +G DGGE+FKRDMR+L+EL SKLNPMAEEFVPPSL K        G+F+ AG  + N+ F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 181 LLQANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 240
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 241 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 300
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 301 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 360
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 361 RIAFVEFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVV 420
           RIAFVEF M                                                   
Sbjct: 311 RIAFVEFVM--------------------------------------------------- 354

Query: 421 SRMNLEYVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 460
                     AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 371 ----------AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of CaUC07G141000 vs. TAIR 10
Match: AT4G10610.1 (CTC-interacting domain 12 )

HSP 1 Score: 365.2 bits (936), Expect = 8.0e-101
Identity = 207/386 (53.63%), Postives = 249/386 (64.51%), Query Frame = 0


Query: 79  LPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVINGADGGENFKRDMRDLEE 138
           L SP+  + +   ++G  +N          G G++      +  +DGGE+FKRDMR+L E
Sbjct: 18  LISPSPPSSVTSQESGASSNNDH------GGNGIHDEIGVHVARSDGGESFKRDMRELHE 77

Query: 139 LLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANSANNEGNNSRRKKNGFSQG 198
           LLSKLNPMA+EF+PPSL K     F+G      N F+   N   NE  + RRKK+   QG
Sbjct: 78  LLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQG 137

Query: 199 RRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHF 258
           +RRMN + +  +R+E+ RRTVYVSDIDQQVTEE LA +F   G+VVDCRICGDPNS+L F
Sbjct: 138 KRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRF 197

Query: 259 AFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYC 318
           AFIEFTDE GAR +LNLSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYC
Sbjct: 198 AFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYC 257

Query: 319 TNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMYISGLLGFRMHLQYL 378
           TNIDKK+TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF M               
Sbjct: 258 TNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVM--------------- 317

Query: 379 LYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSRMNLEYVLHAESAIAALNCSGVV 438
                                                         AESAIAALNCSGV+
Sbjct: 318 ----------------------------------------------AESAIAALNCSGVL 336

Query: 439 LGSLPIRVSPSKTPVRPRS-PRAQLN 464
           LGSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 378 LGSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of CaUC07G141000 vs. TAIR 10
Match: AT3G49390.1 (CTC-interacting domain 10 )

HSP 1 Score: 356.3 bits (913), Expect = 3.7e-98
Identity = 219/465 (47.10%), Postives = 276/465 (59.35%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSND----PKDVENQKPKNDSTLPMNAESDFHPNA 60
           MAVAEN G K+ S  Q L+N   ++ + +    P   ++Q PK+DS+ P+  +S   P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDST--PET 60

Query: 61  NDQNIQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMP 120
           +D+                       N  AQ  Q  NGF  NG+             +  
Sbjct: 61  DDR----------------------INETAQKVQTLNGFSGNGE-------------RDN 120

Query: 121 NGVINGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLL 180
           NG             +++DL +  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 NG-------------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFAA 180

Query: 181 QANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 240
               A+   +  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 241 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 300
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 301 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 361 AFVEFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSR 420
           AFVEF M                                                     
Sbjct: 361 AFVEFAM----------------------------------------------------- 351

Query: 421 MNLEYVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 462
                   AESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 421 --------AESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of CaUC07G141000 vs. TAIR 10
Match: AT3G49390.2 (CTC-interacting domain 10 )

HSP 1 Score: 356.3 bits (913), Expect = 3.7e-98
Identity = 219/465 (47.10%), Postives = 276/465 (59.35%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQTLENTMLSSDSND----PKDVENQKPKNDSTLPMNAESDFHPNA 60
           MAVAEN G K+ S  Q L+N   ++ + +    P   ++Q PK+DS+ P+  +S   P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDST--PET 60

Query: 61  NDQNIQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMP 120
           +D+                       N  AQ  Q  NGF  NG+             +  
Sbjct: 61  DDR----------------------INETAQKVQTLNGFSGNGE-------------RDN 120

Query: 121 NGVINGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLL 180
           NG             +++DL +  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 NG-------------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFAA 180

Query: 181 QANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 240
               A+   +  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 241 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 300
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 301 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 361 AFVEFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVVSR 420
           AFVEF M                                                     
Sbjct: 361 AFVEFAM----------------------------------------------------- 351

Query: 421 MNLEYVLHAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 462
                   AESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 421 --------AESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of CaUC07G141000 vs. TAIR 10
Match: AT1G32790.2 (CTC-interacting domain 11 )

HSP 1 Score: 352.4 bits (903), Expect = 5.4e-97
Identity = 194/333 (58.26%), Postives = 223/333 (66.97%), Query Frame = 0


Query: 121 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKN-----FSGYFSGAGLGYTND-F 180
           +G DGGE+FKRDMR+L+EL SKLNPMAEEFVPPSL K        G+F+ AG  + N+ F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 181 LLQANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 240
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 241 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 300
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 301 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 360
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 361 RIAFVEFTMYISGLLGFRMHLQYLLYVSYLSVIMDVVFLINQSVVVLVFAIDQYIFAFVV 420
           RIAFVEF M                                                   
Sbjct: 311 RIAFVEFVM--------------------------------------------------- 342

Query: 421 SRMNLEYVLHAESAIAALNCSGVVLGSLPIRVS 448
                     AESAIAALNCSGVVLGSLPIR S
Sbjct: 371 ----------AESAIAALNCSGVVLGSLPIRSS 342

The following BLAST results are available for this feature:

BLAST of CaUC07G141000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900938.1	6.4e-209	84.23	polyadenylate-binding protein-interacting protein 12 [Benincasa hispida]	[more]
XP_004137206.1	1.7e-201	81.68	polyadenylate-binding protein-interacting protein 12 [Cucumis sativus] >XP_01165...	[more]
XP_008462907.1	4.9e-201	81.47	PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis melo]	[more]
TYK04620.1	8.3e-201	81.47	polyadenylate-binding protein-interacting protein 12 [Cucumis melo var. makuwa]	[more]
XP_022984928.1	1.1e-200	80.99	polyadenylate-binding protein-interacting protein 12 [Cucurbita maxima] >XP_0229...	[more]

BLAST of CaUC07G141000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPI5	9.9e-104	60.00	Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=...	[more]
Q9S7N9	1.1e-99	53.63	Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=...	[more]
Q9SG10	5.2e-97	47.10	Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=...	[more]
Q9LRR6	1.6e-77	49.25	Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3...	[more]
Q9C8M0	2.7e-77	49.40	Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of CaUC07G141000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ10	8.1e-202	81.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G090360 PE=4 SV=1	[more]
A0A1S3CI01	2.4e-201	81.47	polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3BZR3	4.0e-201	81.47	Polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo var. makuwa...	[more]
A0A6J1JC04	5.3e-201	80.99	polyadenylate-binding protein-interacting protein 12 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1E992	5.3e-201	80.99	polyadenylate-binding protein-interacting protein 12 OS=Cucurbita moschata OX=36...	[more]

BLAST of CaUC07G141000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32790.1	7.0e-105	60.00	CTC-interacting domain 11	[more]
AT4G10610.1	8.0e-101	53.63	CTC-interacting domain 12	[more]
AT3G49390.1	3.7e-98	47.10	CTC-interacting domain 10	[more]
AT3G49390.2	3.7e-98	47.10	CTC-interacting domain 10	[more]
AT1G32790.2	5.4e-97	58.26	CTC-interacting domain 11	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 315..382 e-value: 0.063 score: 17.3 coord: 218..288 e-value: 5.3E-13 score: 59.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 219..281 e-value: 2.5E-10 score: 40.1 coord: 316..362 e-value: 3.8E-5 score: 23.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 314..361 score: 8.705814
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 217..292 score: 13.20844
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 302..459 e-value: 9.6E-10 score: 40.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 176..294 e-value: 9.9E-18 score: 66.5
IPR009818	Ataxin-2, C-terminal	PFAM	PF07145	PAM2	coord: 141..154 e-value: 4.0E-5 score: 23.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..201
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 420..463 coord: 1..364
None	No IPR available	PANTHER	PTHR32343:SF36	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 12-LIKE	coord: 420..463 coord: 1..364
IPR034823	CID8-like protein, RNA recognition motif 1	CDD	cd12459	RRM1_CID8_like	coord: 216..294 e-value: 1.21692E-49 score: 161.82
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 216..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G141000.1	CaUC07G141000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding