
CaUC07G139500 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAGTTCCTATGGACTTTTGCTGTGCAAGAAGTGTTGAAGAAGGTATTGAAACTTGCAGCTGACCAAATTGGTGTGGCATGGGGCTTGGACAGGGAGCTTTCAAACCTCTCCAAGTGGCTACTCAAAGCCGAAGCCATTTTAGGTGACATTAACAGAAAAAAATTACACCATAATTCTGTGAGATTGTGGGTGAAGGATCTTCAACACGTTGTCCATGAAGCTGACGATCTATTGGATGAGCTTGTTTATGAAGATCTTCGTACAAAGGTGGAAAAAGGATTGATTGACAAGGTACGTTGTTCTGTTTTATGTCCCTCCAACATTTTCATTATCTTTCGCTTCAAGATGGCCAAGAAATTGAAGGGCATTATTGAAAAGCTTTCTAAATGTTACTCCGAGGCAACTCCTTTGGGACTAGTTGGCGAAGAATTCATAGAAACAGAGAATGATCTTAGCCAGATTTGA ATGGCGGAGTTCCTATGGACTTTTGCTGTGCAAGAAGTGTTGAAGAAGGTATTGAAACTTGCAGCTGACCAAATTGGTGTGGCATGGGGCTTGGACAGGGAGCTTTCAAACCTCTCCAAGTGGCTACTCAAAGCCGAAGCCATTTTAGGTGACATTAACAGAAAAAAATTACACCATAATTCTGTGAGATTGTGGGTGAAGGATCTTCAACACGTTGTCCATGAAGCTGACGATCTATTGGATGAGCTTGTTTATGAAGATCTTCGTACAAAGGTGGAAAAAGGATTGATTGACAAGGGCATTATTGAAAAGCTTTCTAAATGTTACTCCGAGGCAACTCCTTTGGGACTAGTTGGCGAAGAATTCATAGAAACAGAGAATGATCTTAGCCAGATTTGA ATGGCGGAGTTCCTATGGACTTTTGCTGTGCAAGAAGTGTTGAAGAAGGTATTGAAACTTGCAGCTGACCAAATTGGTGTGGCATGGGGCTTGGACAGGGAGCTTTCAAACCTCTCCAAGTGGCTACTCAAAGCCGAAGCCATTTTAGGTGACATTAACAGAAAAAAATTACACCATAATTCTGTGAGATTGTGGGTGAAGGATCTTCAACACGTTGTCCATGAAGCTGACGATCTATTGGATGAGCTTGTTTATGAAGATCTTCGTACAAAGGTGGAAAAAGGATTGATTGACAAGGGCATTATTGAAAAGCTTTCTAAATGTTACTCCGAGGCAACTCCTTTGGGACTAGTTGGCGAAGAATTCATAGAAACAGAGAATGATCTTAGCCAGATTTGA MAEFLWTFAVQEVLKKVLKLAADQIGVAWGLDRELSNLSKWLLKAEAILGDINRKKLHHNSVRLWVKDLQHVVHEADDLLDELVYEDLRTKVEKGLIDKGIIEKLSKCYSEATPLGLVGEEFIETENDLSQI Homology
BLAST of CaUC07G139500 vs. NCBI nr
Match: XP_004152283.3 (putative disease resistance protein RGA3 isoform X1 [Cucumis sativus] >KGN53113.2 hypothetical protein Csa_014548 [Cucumis sativus]) HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54 Identity = 118/156 (75.64%), Postives = 127/156 (81.41%), Query Frame = 0
BLAST of CaUC07G139500 vs. NCBI nr
Match: XP_008453956.1 (PREDICTED: putative disease resistance protein RGA3 isoform X1 [Cucumis melo] >KAA0044619.1 putative disease resistance protein RGA3 isoform X1 [Cucumis melo var. makuwa] >TYK16970.1 putative disease resistance protein RGA3 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 210.3 bits (534), Expect = 1.0e-50 Identity = 113/156 (72.44%), Postives = 121/156 (77.56%), Query Frame = 0
BLAST of CaUC07G139500 vs. NCBI nr
Match: XP_022145126.1 (probable disease resistance RPP8-like protein 2 [Momordica charantia]) HSP 1 Score: 189.5 bits (480), Expect = 1.8e-44 Identity = 103/156 (66.03%), Postives = 114/156 (73.08%), Query Frame = 0
BLAST of CaUC07G139500 vs. NCBI nr
Match: XP_038881404.1 (putative disease resistance protein RGA3 [Benincasa hispida]) HSP 1 Score: 181.0 bits (458), Expect = 6.6e-42 Identity = 99/160 (61.88%), Postives = 118/160 (73.75%), Query Frame = 0
BLAST of CaUC07G139500 vs. NCBI nr
Match: XP_022145177.1 (putative disease resistance protein RGA3 [Momordica charantia]) HSP 1 Score: 178.3 bits (451), Expect = 4.3e-41 Identity = 93/148 (62.84%), Postives = 110/148 (74.32%), Query Frame = 0
BLAST of CaUC07G139500 vs. ExPASy Swiss-Prot
Match: P0C8S1 (Probable disease resistance RPP8-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RPP8L2 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 8.7e-05 Identity = 28/96 (29.17%), Postives = 58/96 (60.42%), Query Frame = 0
BLAST of CaUC07G139500 vs. ExPASy TrEMBL
Match: A0A0A0KXG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016460 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 7.3e-55 Identity = 118/156 (75.64%), Postives = 127/156 (81.41%), Query Frame = 0
BLAST of CaUC07G139500 vs. ExPASy TrEMBL
Match: A0A5D3D021 (Putative disease resistance protein RGA3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001110 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.9e-51 Identity = 113/156 (72.44%), Postives = 121/156 (77.56%), Query Frame = 0
BLAST of CaUC07G139500 vs. ExPASy TrEMBL
Match: A0A1S3BYA2 (putative disease resistance protein RGA3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494523 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.9e-51 Identity = 113/156 (72.44%), Postives = 121/156 (77.56%), Query Frame = 0
BLAST of CaUC07G139500 vs. ExPASy TrEMBL
Match: A0A6J1CVE9 (probable disease resistance RPP8-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111014643 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 8.9e-45 Identity = 103/156 (66.03%), Postives = 114/156 (73.08%), Query Frame = 0
BLAST of CaUC07G139500 vs. ExPASy TrEMBL
Match: A0A6J1CVR6 (putative disease resistance protein RGA3 OS=Momordica charantia OX=3673 GN=LOC111014685 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 2.1e-41 Identity = 93/148 (62.84%), Postives = 110/148 (74.32%), Query Frame = 0
BLAST of CaUC07G139500 vs. TAIR 10
Match: AT1G53350.1 (Disease resistance protein (CC-NBS-LRR class) family ) HSP 1 Score: 48.1 bits (113), Expect = 6.2e-06 Identity = 28/96 (29.17%), Postives = 58/96 (60.42%), Query Frame = 0
BLAST of CaUC07G139500 vs. TAIR 10
Match: AT3G14470.1 (NB-ARC domain-containing disease resistance protein ) HSP 1 Score: 42.4 bits (98), Expect = 3.4e-04 Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = 0
BLAST of CaUC07G139500 vs. TAIR 10
Match: AT5G35450.1 (Disease resistance protein (CC-NBS-LRR class) family ) HSP 1 Score: 42.4 bits (98), Expect = 3.4e-04 Identity = 38/148 (25.68%), Postives = 74/148 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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