CaUC07G139070 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G139070
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Ciliary neurotrophic factor
Location	Ciama_Chr07: 29876842 .. 29879738 (-)
RNA-Seq Expression	CaUC07G139070
Synteny	CaUC07G139070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAGGGATGGCGGAGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAGACTGATGGAGAAGAACGACAAAAGAACCGCCTCTCATCGGAGCTCCGACGCCGATGCCGACGATGACGATCTGCAACTTCTTTCCCGATTACTCTCTCAGGTTAGATTACGTTAAATGACTTCATGATTAGATTTTGAATATTAGATATCTTTCGATTTGTTTTATTTACTATTAAGATTCTTATGTTTTGTGATGGTAATTTCTTTTATAATTATTCAATAAAAGAAATTGGGAGAATCGAATTGATCTGGAGAGTTCAAGTTTATTGTTTTCGATTGTGCGTCAAGGTTTTGAATAATGTTTACGTACGGAAATATCAAATATCGATATTTCTGGAAAAAGAAAACTATATGTTCTAAATTTAATGGATTTTTTTTTTTTTTTTGTTATATTTCATCGGTTGTCTTTTTAAGATATAAAAAACAATGTTGATTCAACTGTTAAACCCGTATAGCCATATGAAAGGTGTTTAACAAGTCTGCCGATTTTAAACTTTGATAAATACAAATAGGTTTTTAAATTTAGATTTTAAATCTTAGAATGTATAATTATATTATAAAAATATATTAGGAGATTGAGTAGTTTGTTATGTTATAAACTCAACTTGTTTTTACTTAAATTTAAATATATTTATATTATTATAAGTGCAACTTGTTTTGGTTAATATAAAATTGGAAATCTTGGAAGTATTCTTTAAAAAAATCAACTTATTAAGTTTATCAAATTTTGTTTGATAACTAGTTCAGCTCTTATTTTTGATTTTAGAAAATTAAGTTTGTCTCCTCCACATTTCTTATAATAATTTATATATCACTTAAATACAATGGTTGAATTTTTAGCCAAATTCTAAAAACAAAAACAATTTTTTAATGGCTACTTTTTTTAGTTTTCAAAATTTAGCTTGGTTTTTTAAACTATTAGTAAAAACTAGACAACAAAAAAAGAAATTTAGAGGTGGAAGTAGTATCATAGGCTTAATTTTTTAAAACAAAAAATGAAAAATGAAATAGTTACCAAATCGAACCTTAAAAAACTACTAAAATTTCTCATTTAATTTTTCATATGATTAATTCAAGAGTTGGGACAGTTTGAATTTAAAAAGAAATCTCTTTTTATAGATTTAATTACCAACCAAATTATAGATATATATATATATATATATTAATTATCTTAACCATTGAAATGATTACCCTTATTCCCGTCCCACCTCATTAGGGCCGAATCCCAACTGGGCCTCGTCCGGGAATGGGGAAAATTTTCATTCGCCCATATAGTTTTATTTTCATTTTTATATATTAATATATACATAATTAAATAACTCCATATCACATTTTGTTGTGTTTCATTTATAGTGGACATTTATCTTTCTTAAACCATAATTTAATTGATTCTTTCTAAAGGGATGGATCCATGGAGAGTCACATTCCTATGAGAGTTACTTATGGAGGAGACCAAAAAACCATCCTATCTCACCCTACTCCCTCACATCCAAACTAAAAAAATACCGTTTTCATAAATTATTTTTCTTTTTTAAAATTAAAAATGCAAGTGTTTTTTTTTTCTTAAAAGAAGAAAAATATAGACATAACAACATAAATGAGAACTGACAAATGAAATCATTATAACCTAAGAAAATCTCTCCTCTCTTTTCTTACCTTTCCTTCTCTACCATTTCTGTAATAATCATTTCTTTCCTACCTTTATCCATTTGTTTTTCTAGATACTCATTTAACCTAATTTTTTAAAACAACTTATATCTTGAATCACTAATGGGGGACATGGAAATAAGAGGAAAAACACAAGTTTTAAGACCATCATTTAATTATTGATTTTTAATTTATAAAAATTAAAAACCAAAAGTTACTTGGTTTTTCTTTATAACATGAAGCAAGAGAACCAAAGAGATAAGGAGATAGAGAATATGAAAAGTTTATTTTAATCTTCTAGCTTGCAGCCAAATGGTCAAAATCCTTTACTTCATTTTCTAATTGGGGAACAAGTAATTTAGTCCCACAAGTGACTGGCCTTCATGGAATTAACAGGTGGAATCAATAAGAGAAGAACAGAGGCTTAACCACTCCCAAATCTCAACTCAGCAAGAGTATGAGAAAATAATTGAGACAGACTTAGAGTCTCAAAGTGAAAATATGGAAAGAAGTGGAAGCAGAGTGAAAACAGAGAAGGAGATAGTGAAAGAGCTAAAAGAAGTGAAGAGGCAGAATTTCATAACTCACTGCCTTGTTTCAGCAATGATTATCCTCACTGTTGCTTGGCAAATCTCTGAGGTATCTTTCATTTTGAAACTCAGAGATGGTTTGAGCAATCCATTCAAATCCCTGGGTAGAATTCTGAAAAGGAAGACAACTTCAGCAATACAACAACAGATTGAAGCTACTGAATTGCCTCATCTTAATATGCCTGCCCTACCTCATGTGAACCTACCAGAGTTTGACTTGGATGGAAAATAATACCTGATCTACAAAGCCACCAATCAATGATAGCTTCATCAAGATCACCCAAGTTGTTTCATTGGATGTGCAGCTCTTTGATTTAATTTTCTAGTCACAACCAAACATTTCAACAACTTTGTAGATCTATGTATTAGTTGTTTAAAGGAAAAGGTGACAATGAAACCCTGTATTTTTTGGGCACAGCGCGTTGTGTGTCGTTACTGCTTTCATTTTGGACATTCATATTTCAATTTCCATGCCGTAGAAGTTTAAAGCTGTGATTTTCGAATGGTATAATAGCATATAGTGCACTCGCATTTGGATAGAATGCAGGGAGTACTGAGCAAATCACTTGAATTTGAAGAAAATATCTATTTCATCA

mRNA sequence

AAAAAAAAAAAGGGATGGCGGAGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAGACTGATGGAGAAGAACGACAAAAGAACCGCCTCTCATCGGAGCTCCGACGCCGATGCCGACGATGACGATCTGCAACTTCTTTCCCGATTACTCTCTCAGGTGGAATCAATAAGAGAAGAACAGAGGCTTAACCACTCCCAAATCTCAACTCAGCAAGAGTATGAGAAAATAATTGAGACAGACTTAGAGTCTCAAAGTGAAAATATGGAAAGAAGTGGAAGCAGAGTGAAAACAGAGAAGGAGATAGTGAAAGAGCTAAAAGAAGTGAAGAGGCAGAATTTCATAACTCACTGCCTTGTTTCAGCAATGATTATCCTCACTGTTGCTTGGCAAATCTCTGAGGTATCTTTCATTTTGAAACTCAGAGATGGTTTGAGCAATCCATTCAAATCCCTGGGTAGAATTCTGAAAAGGAAGACAACTTCAGCAATACAACAACAGATTGAAGCTACTGAATTGCCTCATCTTAATATGCCTGCCCTACCTCATGTGAACCTACCAGAGTTTGACTTGGATGGAAAATAATACCTGATCTACAAAGCCACCAATCAATGATAGCTTCATCAAGATCACCCAAGTTGTTTCATTGGATGTGCAGCTCTTTGATTTAATTTTCTAGTCACAACCAAACATTTCAACAACTTTGTAGATCTATGTATTAGTTGTTTAAAGGAAAAGGTGACAATGAAACCCTGTATTTTTTGGGCACAGCGCGTTGTGTGTCGTTACTGCTTTCATTTTGGACATTCATATTTCAATTTCCATGCCGTAGAAGTTTAAAGCTGTGATTTTCGAATGGTATAATAGCATATAGTGCACTCGCATTTGGATAGAATGCAGGGAGTACTGAGCAAATCACTTGAATTTGAAGAAAATATCTATTTCATCA

Coding sequence (CDS)

ATGGCGGAGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAGACTGATGGAGAAGAACGACAAAAGAACCGCCTCTCATCGGAGCTCCGACGCCGATGCCGACGATGACGATCTGCAACTTCTTTCCCGATTACTCTCTCAGGTGGAATCAATAAGAGAAGAACAGAGGCTTAACCACTCCCAAATCTCAACTCAGCAAGAGTATGAGAAAATAATTGAGACAGACTTAGAGTCTCAAAGTGAAAATATGGAAAGAAGTGGAAGCAGAGTGAAAACAGAGAAGGAGATAGTGAAAGAGCTAAAAGAAGTGAAGAGGCAGAATTTCATAACTCACTGCCTTGTTTCAGCAATGATTATCCTCACTGTTGCTTGGCAAATCTCTGAGGTATCTTTCATTTTGAAACTCAGAGATGGTTTGAGCAATCCATTCAAATCCCTGGGTAGAATTCTGAAAAGGAAGACAACTTCAGCAATACAACAACAGATTGAAGCTACTGAATTGCCTCATCTTAATATGCCTGCCCTACCTCATGTGAACCTACCAGAGTTTGACTTGGATGGAAAATAA

Protein sequence

MAEAAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLESQSENMERSGSRVKTEKEIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLDGK

Homology

[Close]

BLAST of CaUC07G139070 vs. NCBI nr
Match: XP_038895500.1 (uncharacterized protein LOC120083719 [Benincasa hispida])

HSP 1 Score: 298.1 bits (762), Expect = 5.3e-77
Identity = 168/192 (87.50%), Postives = 177/192 (92.19%), Query Frame = 0


Query: 1   MAEAAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRL 60
           MAEA EEMELISLAIRRLME++D RTASHRSS ADA   DLQLLSRLLSQVES REEQRL
Sbjct: 1   MAEATEEMELISLAIRRLMEEDDNRTASHRSSGADA--HDLQLLSRLLSQVESTREEQRL 60

Query: 61  NHSQISTQQEYEKIIETDLESQSENMERSG-SRVKTEKEIVKELKEVKRQNFITHCLVSA 120
           NHSQIS QQ+ EKIIET+LE QSEN+ERSG +RVK EK IVKELKEVKRQNFITHCLVSA
Sbjct: 61  NHSQISAQQKDEKIIETELEPQSENVERSGRNRVKIEKVIVKELKEVKRQNFITHCLVSA 120

Query: 121 MIILTVAWQISEVSFILKLRDGLSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALP 180
           MIILTVAWQ+SEVSFILKLR+GLSNPFKSLG ILKRKTTSAIQ QIEATELPHLNMPALP
Sbjct: 121 MIILTVAWQVSEVSFILKLRNGLSNPFKSLGTILKRKTTSAIQHQIEATELPHLNMPALP 180

Query: 181 HVNLPEFDLDGK 192
           HVNLPEFDLDG+
Sbjct: 181 HVNLPEFDLDGR 190

[Close]

BLAST of CaUC07G139070 vs. NCBI nr
Match: XP_008454012.1 (PREDICTED: uncharacterized protein LOC103494562 [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 9.8e-63
Identity = 146/188 (77.66%), Postives = 164/188 (87.23%), Query Frame = 0


Query: 4   AAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHS 63
           A EEMELISLAIRRLME+N  RT SHRSSD D D DD+QLLS+LLS+VES REEQRLNH 
Sbjct: 5   AEEEMELISLAIRRLMEENRNRTTSHRSSDTDTDADDMQLLSQLLSEVESTREEQRLNH- 64

Query: 64  QISTQQEYEKIIETDLESQSE-NMERSGSRVKTEKEIVKELKEVKRQNFITHCLVSAMII 123
              ++QE  +IIET+LE++ E N+ERS  +VKTE EIVKELKEVK+QNF+THCLVSAMII
Sbjct: 65  --YSKQEDGEIIETNLEAEGENNVERSEIKVKTE-EIVKELKEVKKQNFVTHCLVSAMII 124

Query: 124 LTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHV 183
           LTVAWQISEVSFILKLRDG LSNPFKSLG ILKRKTTSAIQ QIEATELP LN+PA+PHV
Sbjct: 125 LTVAWQISEVSFILKLRDGLLSNPFKSLGTILKRKTTSAIQHQIEATELPQLNIPAIPHV 184

Query: 184 NLPEFDLD 190
           +LP+FD D
Sbjct: 185 SLPDFDDD 188

[Close]

BLAST of CaUC07G139070 vs. NCBI nr
Match: XP_004152113.1 (uncharacterized protein LOC101214522 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-61
Identity = 152/192 (79.17%), Postives = 166/192 (86.46%), Query Frame = 0


Query: 1   MAEAAE-EMELISLAIRRLMEKNDKRTASHRSS--DADADDDDLQLLSRLLSQVESIREE 60
           MAEAA  EMELISLAIRRLME+N  RT SHRSS  DADAD DD+QLLSRLLS+VES R E
Sbjct: 1   MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGE 60

Query: 61  QRLNHSQISTQQEYEKIIETDLESQSE-NMERSGSRVKTEKEIVKELKEVKRQNFITHCL 120
           QRLNHS    +QE  +IIET+LE++ E N+ERS  ++KTE EIVKELKEVK+QNFITHCL
Sbjct: 61  QRLNHS----KQEDGEIIETNLEAERENNVERSEMKLKTE-EIVKELKEVKKQNFITHCL 120

Query: 121 VSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNM 180
           VSAMIILTVAWQISEVSFILKLRDG LSNPFKSL  ILKRKTTSAIQ QIEATELPHLN+
Sbjct: 121 VSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNI 180

Query: 181 PALPHVNLPEFD 188
           PALPHV LP+FD
Sbjct: 181 PALPHVTLPDFD 187

[Close]

BLAST of CaUC07G139070 vs. NCBI nr
Match: KAA0044571.1 (uncharacterized protein E6C27_scaffold46G003210 [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-61
Identity = 143/184 (77.72%), Postives = 161/184 (87.50%), Query Frame = 0


Query: 8   MELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQIST 67
           MELISLAIRRLME+N  RT SHRSSD D D DD+QLLS+LLS+VES REEQRLNH    +
Sbjct: 1   MELISLAIRRLMEENRNRTTSHRSSDTDTDADDMQLLSQLLSEVESTREEQRLNH---YS 60

Query: 68  QQEYEKIIETDLESQSE-NMERSGSRVKTEKEIVKELKEVKRQNFITHCLVSAMIILTVA 127
           +QE  +IIET+LE++ E N+ERS  +VKTE EIVKELKEVK+QNF+THCLVSAMIILTVA
Sbjct: 61  KQEDGEIIETNLEAEGENNVERSEIKVKTE-EIVKELKEVKKQNFVTHCLVSAMIILTVA 120

Query: 128 WQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPE 187
           WQISEVSFILKLRDG LSNPFKSLG ILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+
Sbjct: 121 WQISEVSFILKLRDGLLSNPFKSLGTILKRKTTSAIQHQIEATELPQLNIPAIPHVSLPD 180

Query: 188 FDLD 190
           FD D
Sbjct: 181 FDDD 180

[Close]

BLAST of CaUC07G139070 vs. NCBI nr
Match: KAE8649098.1 (hypothetical protein Csa_015237 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 2.0e-60
Identity = 146/184 (79.35%), Postives = 160/184 (86.96%), Query Frame = 0


Query: 8   MELISLAIRRLMEKNDKRTASHRSS--DADADDDDLQLLSRLLSQVESIREEQRLNHSQI 67
           MELISLAIRRLME+N  RT SHRSS  DADAD DD+QLLSRLLS+VES R EQRLNHS  
Sbjct: 1   MELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGEQRLNHS-- 60

Query: 68  STQQEYEKIIETDLESQSE-NMERSGSRVKTEKEIVKELKEVKRQNFITHCLVSAMIILT 127
             +QE  +IIET+LE++ E N+ERS  ++KTE EIVKELKEVK+QNFITHCLVSAMIILT
Sbjct: 61  --KQEDGEIIETNLEAERENNVERSEMKLKTE-EIVKELKEVKKQNFITHCLVSAMIILT 120

Query: 128 VAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNL 187
           VAWQISEVSFILKLRDG LSNPFKSL  ILKRKTTSAIQ QIEATELPHLN+PALPHV L
Sbjct: 121 VAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNIPALPHVTL 179

[Close]

BLAST of CaUC07G139070 vs. ExPASy TrEMBL
Match: A0A1S3BXR6 (uncharacterized protein LOC103494562 OS=Cucumis melo OX=3656 GN=LOC103494562 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.7e-63
Identity = 146/188 (77.66%), Postives = 164/188 (87.23%), Query Frame = 0


Query: 4   AAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHS 63
           A EEMELISLAIRRLME+N  RT SHRSSD D D DD+QLLS+LLS+VES REEQRLNH 
Sbjct: 5   AEEEMELISLAIRRLMEENRNRTTSHRSSDTDTDADDMQLLSQLLSEVESTREEQRLNH- 64

Query: 64  QISTQQEYEKIIETDLESQSE-NMERSGSRVKTEKEIVKELKEVKRQNFITHCLVSAMII 123
              ++QE  +IIET+LE++ E N+ERS  +VKTE EIVKELKEVK+QNF+THCLVSAMII
Sbjct: 65  --YSKQEDGEIIETNLEAEGENNVERSEIKVKTE-EIVKELKEVKKQNFVTHCLVSAMII 124

Query: 124 LTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHV 183
           LTVAWQISEVSFILKLRDG LSNPFKSLG ILKRKTTSAIQ QIEATELP LN+PA+PHV
Sbjct: 125 LTVAWQISEVSFILKLRDGLLSNPFKSLGTILKRKTTSAIQHQIEATELPQLNIPAIPHV 184

Query: 184 NLPEFDLD 190
           +LP+FD D
Sbjct: 185 SLPDFDDD 188

[Close]

BLAST of CaUC07G139070 vs. ExPASy TrEMBL
Match: A0A0A0KTW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012410 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 5.2e-62
Identity = 152/192 (79.17%), Postives = 166/192 (86.46%), Query Frame = 0


Query: 1   MAEAAE-EMELISLAIRRLMEKNDKRTASHRSS--DADADDDDLQLLSRLLSQVESIREE 60
           MAEAA  EMELISLAIRRLME+N  RT SHRSS  DADAD DD+QLLSRLLS+VES R E
Sbjct: 1   MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGE 60

Query: 61  QRLNHSQISTQQEYEKIIETDLESQSE-NMERSGSRVKTEKEIVKELKEVKRQNFITHCL 120
           QRLNHS    +QE  +IIET+LE++ E N+ERS  ++KTE EIVKELKEVK+QNFITHCL
Sbjct: 61  QRLNHS----KQEDGEIIETNLEAERENNVERSEMKLKTE-EIVKELKEVKKQNFITHCL 120

Query: 121 VSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNM 180
           VSAMIILTVAWQISEVSFILKLRDG LSNPFKSL  ILKRKTTSAIQ QIEATELPHLN+
Sbjct: 121 VSAMIILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELPHLNI 180

Query: 181 PALPHVNLPEFD 188
           PALPHV LP+FD
Sbjct: 181 PALPHVTLPDFD 187

[Close]

BLAST of CaUC07G139070 vs. ExPASy TrEMBL
Match: A0A5A7TSP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003210 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61
Identity = 143/184 (77.72%), Postives = 161/184 (87.50%), Query Frame = 0


Query: 8   MELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQIST 67
           MELISLAIRRLME+N  RT SHRSSD D D DD+QLLS+LLS+VES REEQRLNH    +
Sbjct: 1   MELISLAIRRLMEENRNRTTSHRSSDTDTDADDMQLLSQLLSEVESTREEQRLNH---YS 60

Query: 68  QQEYEKIIETDLESQSE-NMERSGSRVKTEKEIVKELKEVKRQNFITHCLVSAMIILTVA 127
           +QE  +IIET+LE++ E N+ERS  +VKTE EIVKELKEVK+QNF+THCLVSAMIILTVA
Sbjct: 61  KQEDGEIIETNLEAEGENNVERSEIKVKTE-EIVKELKEVKKQNFVTHCLVSAMIILTVA 120

Query: 128 WQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPE 187
           WQISEVSFILKLRDG LSNPFKSLG ILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+
Sbjct: 121 WQISEVSFILKLRDGLLSNPFKSLGTILKRKTTSAIQHQIEATELPQLNIPAIPHVSLPD 180

Query: 188 FDLD 190
           FD D
Sbjct: 181 FDDD 180

[Close]

BLAST of CaUC07G139070 vs. ExPASy TrEMBL
Match: A0A5D3CZN3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001570 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.5e-56
Identity = 132/173 (76.30%), Postives = 150/173 (86.71%), Query Frame = 0


Query: 19  MEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETD 78
           ME+N  RT SHRSSD D D DD+QLLS+LLS+VES REEQRLNH    ++QE  +IIET+
Sbjct: 1   MEENRNRTTSHRSSDTDTDADDMQLLSQLLSEVESTREEQRLNH---YSKQEDGEIIETN 60

Query: 79  LESQSE-NMERSGSRVKTEKEIVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILK 138
           LE++ E N+ERS  +VKTE EIVKELKEVK+QNF+THCLVSAMIILTVAWQISEVSFILK
Sbjct: 61  LEAEGENNVERSEIKVKTE-EIVKELKEVKKQNFVTHCLVSAMIILTVAWQISEVSFILK 120

Query: 139 LRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLD 190
           LRDG LSNPFKSLG ILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+FD D
Sbjct: 121 LRDGLLSNPFKSLGTILKRKTTSAIQHQIEATELPQLNIPAIPHVSLPDFDDD 169

[Close]

BLAST of CaUC07G139070 vs. ExPASy TrEMBL
Match: A0A6J1CVQ0 (uncharacterized protein LOC111014725 OS=Momordica charantia OX=3673 GN=LOC111014725 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.6e-50
Identity = 123/173 (71.10%), Postives = 138/173 (79.77%), Query Frame = 0


Query: 20  EKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDL 79
           EKN    ASHRSS A    DDL LLSRLLSQVES REEQR  HSQ+S QQ          
Sbjct: 7   EKNG--AASHRSSGA----DDLLLLSRLLSQVESTREEQRRKHSQLSAQQ---------- 66

Query: 80  ESQSENMERSGSRVKTEKE-IVKELKEVKRQNFITHCLVSAMIILTVAWQISEVSFILKL 139
               E++ERS ++V+ E+E +VKEL+EVKRQNFITHCLVSAMIILTVAWQ+SEVSFILKL
Sbjct: 67  ----EDVERSETKVEREEEAVVKELEEVKRQNFITHCLVSAMIILTVAWQVSEVSFILKL 126

Query: 140 RDGLSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLDGK 192
           R GLSNPFKSL +ILK+KTTSAI  QIEATELPHLNMPALPHV+LP+FDLDG+
Sbjct: 127 RGGLSNPFKSLAKILKKKTTSAIHNQIEATELPHLNMPALPHVSLPDFDLDGE 159

[Close]

BLAST of CaUC07G139070 vs. TAIR 10
Match: AT1G27300.1 (unknown protein; Has 54 Blast hits to 54 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 6; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15
Identity = 60/152 (39.47%), Postives = 94/152 (61.84%), Query Frame = 0


Query: 3   EAAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNH 62
           E++E++E +S AI +L+ +  KR AS  +   DADD     LS L+SQ+ES   + +   
Sbjct: 2   ESSEDVENLSRAIEKLLHEKRKREASGDAFIEDADDQ--LFLSSLISQLESPNPKGK--- 61

Query: 63  SQISTQQEYEKIIETDLESQSENMERSGSRVKTE-KEIVKELKEVKRQNFITHCLVSAMI 122
             + T +E EK  E+   S S+       +++   +EI K++K+VK+QN ITH L+SA I
Sbjct: 62  EDVITGEEEEKEEESADSSPSKGKSEGQRQLEESIEEIAKDIKKVKKQNKITHVLLSATI 121

Query: 123 ILTVAWQISEVSFILKLRDGLSNPFKSLGRIL 154
           ILT+ WQ+SE S I  L+D +S+P +S+G +L
Sbjct: 122 ILTLVWQLSEYSMIFMLKDRISHPVRSIGGML 148

The following BLAST results are available for this feature:

BLAST of CaUC07G139070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895500.1	5.3e-77	87.50	uncharacterized protein LOC120083719 [Benincasa hispida]	[more]
XP_008454012.1	9.8e-63	77.66	PREDICTED: uncharacterized protein LOC103494562 [Cucumis melo]	[more]
XP_004152113.1	1.1e-61	79.17	uncharacterized protein LOC101214522 [Cucumis sativus]	[more]
KAA0044571.1	2.4e-61	77.72	uncharacterized protein E6C27_scaffold46G003210 [Cucumis melo var. makuwa]	[more]
KAE8649098.1	2.0e-60	79.35	hypothetical protein Csa_015237 [Cucumis sativus]	[more]

BLAST of CaUC07G139070 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC07G139070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BXR6	4.7e-63	77.66	uncharacterized protein LOC103494562 OS=Cucumis melo OX=3656 GN=LOC103494562 PE=...	[more]
A0A0A0KTW6	5.2e-62	79.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012410 PE=4 SV=1	[more]
A0A5A7TSP6	1.2e-61	77.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CZN3	2.5e-56	76.30	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1CVQ0	1.6e-50	71.10	uncharacterized protein LOC111014725 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]

BLAST of CaUC07G139070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27300.1	1.2e-15	39.47	unknown protein; Has 54 Blast hits to 54 proteins in 19 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	PANTHER	PTHR35280:SF1	F17L21.9	coord: 5..189
None	No IPR available	PANTHER	PTHR35280	F17L21.9	coord: 5..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G139070.1	CaUC07G139070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane