CaUC07G139030 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G139030
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr07: 29837150 .. 29839992 (-)
RNA-Seq Expression	CaUC07G139030
Synteny	CaUC07G139030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCACCCATTGACCACCGTGGTGATTACCACTGCGACAACACTTCAGCAACCAACTCTGATGACCCCCTTCATCCAGCCAACTTTAGGAACCAACTCCAGACTCCAGCAAGCACCTCTGATGACAACTTCGACGAAGACCATGTCTGATGATCAACTCCAATGACAACCACCGATGATGGCCAACGTTGATATTCACCTCAAACGACCAACTTCGACGAATACCACCTCCAATGATCAACTTTGTGGACGACCATTTCTAGTGGGCAACTCCGATGATCACCTCACATCTCCAACAACTAACATATACGCTCTCAACCATTTCTTAGAGTAAAATTTAAATTAAAAAAAAAAAGTAATTTGAGATTAATTAATTGAATGGCTAGATTTTTGTAAACAACATTAAATTTCAAGCATAGAGAGGTTTTTTCTTAGACAAAGAAATAACTCATATTATTTTTGTGTAACCTAGGAAACTACATTTTTTCCAAATTTACTGAGTTATATGTGTTGGTACAAATTGGGGGGTAGGAATGAGTTTATTTGTCAACTAGTCTTCAAGGAATTGTCTTCTGTTCGCTCGAATATTCTGGAAAGACTTTGTCGAAGAATGATGTTTCAGATTCTGGATGACAAAAACATAGGTTGAAGTTGCAATCACATTTGGTTGGATTGGAACAATCATTAGAAGTATTGCAGGGAACGTTTACTACATTTCTTGCTTCTGACACGAACAATGTTCCTGAAACATTTTAATTCATAGTTGTCATTCAAGATAAACATAGTAAAAAGAGAAAACATAGAGGTGAGGAGAAAATTAAAATTAATTCATGTACCAGAGGAAATGAAGAACATCAATAGTATGCAAGCCAACTTAGTCGAGGACTTCTCCATATCTAAATTGTAGTAAGTGAATATTACATATGATTTGAAACCTTTCCTATTGGTTTTTATGTTTTTAGATCCAAAATAGATTCTAATTTATAGTCCAATTGTGTAGCTTAAAATGGTAGGAAATATCTCATGAATTAAAAGATGGATTTTGTTGCCCAATATATCTTGTGTTGGATAGAATTACATAATTTTCCATATTAGCCGATGATTCTAAAAAACTAAGCCAATTTTTAGAACTAAAAAAAAATGTTTAATACTTATTTTTTTCTTGAAATTTGGCTAAGAATTTAATTGTTGTACTTAAAAAGGTTGCAACTAGTTATAAGAAATTTAGAGAAAATAAGTTTAATTTTCAGAAAGCAAAAACCTTGATAAGAGTTAGACAGATAGATGACTATTTGAGAGGAGGTTTGGTGATCCTTTGTTCGAGGGGAGGATTGTTGGGAATGTGACCAAAATCACACATTAGCCAAATAAGTAAATGATCATGAATATATAAGCATGGCAATATCAATACTATTGTCTGATTATTAGTACACACATATGTCAATTGAGTTATACTCGTTTTTTAAATTTAAGGAAGGAGTATCTTTCAGTGAAATTGGGTTGTATGTTGTATCCAAATCTTGGAGTTTTTATTTTCTTTTTTGAAATTAATATCTCAACTGTTGAATTTTAAAACTTTTTTTAAAAAAATATTTTCGTTATGCTTTCTATAATCTATAAGATTTTGATTTTTTTTTTTTTTTAAAAAAAAAAAAGAAAAAGAAACCTATATTTATTATGTTTACGCCGTCCAAAATTGTAAACCGATCAAAGTTTTCTTTTGTCCATATGGTCGGAGAAGAAATCTTCAAATCCTAAAATCTTAAACCAAAGGGAAGAATCTTAGATAAAGAAACAACCTGCATCAAACGACTCTTCACAAAATAAATTAAATTATTATTACTTAAACATTTACAAATTCTAAGTCTTTTATCGACTTAATTCAAAAATTAAATTTTAATTAATTATCTTTTCATTATATCAAGTTTTATTCCCAAAAAATAAAAATAAACGGACACAAACACTGGAACTAGAAATGTTTAAACCTCGTAACTTCACATTACAATTACACTATATATAAAAATAAAGACTAGATAAATGAAGTAGATTAGTTAAATCTCATAGTTTCATATTACTATTATAATGTACGTGTAAATGTATATTAGTTAATTACCAAAATACATTAATATTGGTAGAGAAAAATCAATAAGATAAAATATTTTGTTTTAATAAAAAATTATGAAAAATTATTTTTATTTCCTTTTCTATATTTTAATCGAGTCTATTGAGTTACAATCAGATAATTCACATTGGACCAATTACAATGTATTTATATATCGATTATAAATCAAGCTCTTCATTTTACATTGTATTTAATATTTTTGGCATACGAACAAGTTAAGAGAGAATAAAGTATTATCCAAATATCATCCACGTGTCCTGCATACGATTATTATTATTTCCAATTTTTCCTAACTTCTCAAGGTGAGAAGGATTTTGCTGGGTGTCACGTTTTCAATTAATTAATTGTCTTTTTGAACAATTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATGTCAAGGCTTAGTAATCGAACTATTTGAATGGATTCGGTTCAAGCTATAAATAATATTTGATAACGGGTTGGTTCGGTTTCTTATACTTTTATTTTCATTTATATTTTATATTTTAACTATCCATACTTCTCTTTTCCTAAACCTATTTTCGCGTTCTGACGGTCAGCCACCACGCCCCTCCGACGTCGTCTCCGCTCCTGCTGCCTCACGCTGCACTCTCAGCCTTCCGACCAAATCGCCGCCTCCTCCTCCCCCGCACACTGAGCAATTAGAGTTACTTATCTCTGCCTTCTTCTCAGAAACACAGTGGTTCAGCTCCTAA

mRNA sequence

ATGGTTTCACCCATTGACCACCGTGGTGATTACCACTGCGACAACACTTCAGCAACCAACTCTGATGACCCCCTTCATCCAGCCAACTTTAGGAACCAACTCCAGACTCCAGCAAGCACCTCTGATGACAACTTCGACGAAGACCATCCACCACGCCCCTCCGACGTCGTCTCCGCTCCTGCTGCCTCACGCTGCACTCTCAGCCTTCCGACCAAATCGCCGCCTCCTCCTCCCCCGCACACTGAGCAATTAGAGTTACTTATCTCTGCCTTCTTCTCAGAAACACAGTGGTTCAGCTCCTAA

Coding sequence (CDS)

ATGGTTTCACCCATTGACCACCGTGGTGATTACCACTGCGACAACACTTCAGCAACCAACTCTGATGACCCCCTTCATCCAGCCAACTTTAGGAACCAACTCCAGACTCCAGCAAGCACCTCTGATGACAACTTCGACGAAGACCATCCACCACGCCCCTCCGACGTCGTCTCCGCTCCTGCTGCCTCACGCTGCACTCTCAGCCTTCCGACCAAATCGCCGCCTCCTCCTCCCCCGCACACTGAGCAATTAGAGTTACTTATCTCTGCCTTCTTCTCAGAAACACAGTGGTTCAGCTCCTAA

Protein sequence

MVSPIDHRGDYHCDNTSATNSDDPLHPANFRNQLQTPASTSDDNFDEDHPPRPSDVVSAPAASRCTLSLPTKSPPPPPPHTEQLELLISAFFSETQWFSS

Homology

The following BLAST results are available for this feature:

BLAST of CaUC07G139030 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC07G139030 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC07G139030 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC07G139030 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G139030.1	CaUC07G139030.1	mRNA