CaUC07G138870 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G138870
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Membrane-associated 30 kDa protein
Location	Ciama_Chr07: 29636587 .. 29636817 (-)
RNA-Seq Expression	CaUC07G138870
Synteny	CaUC07G138870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTTCAAAAGATTACTACCATTTTGATTGTTTGTGTGGTATTCAGTATTGTTTTGAGTCAGATAAGTGTAGCTGATGCAGCTCGAGTGCTCCCAAAGACTTCAAGTGATCATGGTGTTGATTATGTCGACCCATATTCGATAGTTTATCACAAAGCGAAGAAAACTGTCTCGTGTTGGCTTGGAAAGTTGTCTTCTGGACCGAGTCCTAGTGGCCCAGGCCACTAG

mRNA sequence

ATGAAGTTTCAAAAGATTACTACCATTTTGATTGTTTGTGTGGTATTCAGTATTGTTTTGAGTCAGATAAGTGTAGCTGATGCAGCTCGAGTGCTCCCAAAGACTTCAAGTGATCATGGTGTTGATTATGTCGACCCATATTCGATAGTTTATCACAAAGCGAAGAAAACTGTCTCGTGTTGGCTTGGAAAGTTGTCTTCTGGACCGAGTCCTAGTGGCCCAGGCCACTAG

Coding sequence (CDS)

ATGAAGTTTCAAAAGATTACTACCATTTTGATTGTTTGTGTGGTATTCAGTATTGTTTTGAGTCAGATAAGTGTAGCTGATGCAGCTCGAGTGCTCCCAAAGACTTCAAGTGATCATGGTGTTGATTATGTCGACCCATATTCGATAGTTTATCACAAAGCGAAGAAAACTGTCTCGTGTTGGCTTGGAAAGTTGTCTTCTGGACCGAGTCCTAGTGGCCCAGGCCACTAG

Protein sequence

MKFQKITTILIVCVVFSIVLSQISVADAARVLPKTSSDHGVDYVDPYSIVYHKAKKTVSCWLGKLSSGPSPSGPGH

Homology

[Close]

BLAST of CaUC07G138870 vs. NCBI nr
Match: KAG7018440.1 (hypothetical protein SDJN02_20308, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 121.7 bits (304), Expect = 2.7e-24
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISVADAARVLPKTSSDHGVDYVDPYSIVYHKAKKTVSC 60
          MKFQKI +  IVCVVF I+LSQIS  DAARVL +T S+HGVDY+DPYSIVY KAK+TVSC
Sbjct: 11 MKFQKIRSFFIVCVVFGIILSQISTIDAARVLSET-SNHGVDYIDPYSIVYQKAKETVSC 70

Query: 61 WLGKLSSGPSPSGPGH 77
          WLGKLSSGPSPSGPGH
Sbjct: 71 WLGKLSSGPSPSGPGH 85

[Close]

BLAST of CaUC07G138870 vs. NCBI nr
Match: KGN53025.1 (hypothetical protein Csa_015299 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 1.3e-23
Identity = 60/81 (74.07%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISVADAARVL----PKTSSDHGVDY-VDPYSIVYHKAK 60
          MKFQKITT+LIVCV+  +VLSQI+VADAAR+L    P+   DHGVDY +DPYSIVY KAK
Sbjct: 2  MKFQKITTLLIVCVLVGVVLSQINVADAARILLSETPRDDHDHGVDYHIDPYSIVYQKAK 61

Query: 61 KTVSCWLGKLSSGPSPSGPGH 77
          +++SCWLGKLSSGPSPSGPGH
Sbjct: 62 ESISCWLGKLSSGPSPSGPGH 82

[Close]

BLAST of CaUC07G138870 vs. NCBI nr
Match: KAA0043548.1 (hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 2.1e-16
Identity = 48/77 (62.34%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISVADAARVLPKT-SSDHGVDYVDPYSIVYHKAKKTVS 60
          MKFQKI  +LI+CVVF IV S I   DAAR+L +T   DH VD +D YSI +HKAK +V 
Sbjct: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60

Query: 61 CWLGKLSSGPSPSGPGH 77
          CWL  L SGPSP GPGH
Sbjct: 61 CWLENLESGPSPKGPGH 77

[Close]

BLAST of CaUC07G138870 vs. NCBI nr
Match: TYK02483.1 (hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 4.6e-16
Identity = 47/77 (61.04%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISVADAARVLPKT-SSDHGVDYVDPYSIVYHKAKKTVS 60
          MKFQKI  +LI+C+VF IV S I   DAAR+L +T   DH VD +D YSI +HKAK +V 
Sbjct: 1  MKFQKIAALLIICLVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60

Query: 61 CWLGKLSSGPSPSGPGH 77
          CWL  L SGPSP GPGH
Sbjct: 61 CWLENLESGPSPKGPGH 77

[Close]

BLAST of CaUC07G138870 vs. NCBI nr
Match: KAA0043550.1 (hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 90.5 bits (223), Expect = 6.7e-15
Identity = 50/79 (63.29%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISV--ADAARVLPKT-SSDHGVDYVDPYSIVYHKAKKT 60
          MKFQKI  +LIVCVVF IV S I +   DAAR+L +T   DH VD VDPYSI +HKAK +
Sbjct: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60

Query: 61 VSCWLGKLSSGPSPSGPGH 77
          V CWL  L SGPS  GPGH
Sbjct: 61 VKCWLENLGSGPSLKGPGH 79

[Close]

BLAST of CaUC07G138870 vs. ExPASy TrEMBL
Match: A0A0A0KTV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011720 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.5e-24
Identity = 60/81 (74.07%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISVADAARVL----PKTSSDHGVDY-VDPYSIVYHKAK 60
          MKFQKITT+LIVCV+  +VLSQI+VADAAR+L    P+   DHGVDY +DPYSIVY KAK
Sbjct: 2  MKFQKITTLLIVCVLVGVVLSQINVADAARILLSETPRDDHDHGVDYHIDPYSIVYQKAK 61

Query: 61 KTVSCWLGKLSSGPSPSGPGH 77
          +++SCWLGKLSSGPSPSGPGH
Sbjct: 62 ESISCWLGKLSSGPSPSGPGH 82

[Close]

BLAST of CaUC07G138870 vs. ExPASy TrEMBL
Match: A0A5A7TL44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00460 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-16
Identity = 48/77 (62.34%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISVADAARVLPKT-SSDHGVDYVDPYSIVYHKAKKTVS 60
          MKFQKI  +LI+CVVF IV S I   DAAR+L +T   DH VD +D YSI +HKAK +V 
Sbjct: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60

Query: 61 CWLGKLSSGPSPSGPGH 77
          CWL  L SGPSP GPGH
Sbjct: 61 CWLENLESGPSPKGPGH 77

[Close]

BLAST of CaUC07G138870 vs. ExPASy TrEMBL
Match: A0A5D3BS33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00050 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.3e-16
Identity = 47/77 (61.04%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISVADAARVLPKT-SSDHGVDYVDPYSIVYHKAKKTVS 60
          MKFQKI  +LI+C+VF IV S I   DAAR+L +T   DH VD +D YSI +HKAK +V 
Sbjct: 1  MKFQKIAALLIICLVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60

Query: 61 CWLGKLSSGPSPSGPGH 77
          CWL  L SGPSP GPGH
Sbjct: 61 CWLENLESGPSPKGPGH 77

[Close]

BLAST of CaUC07G138870 vs. ExPASy TrEMBL
Match: A0A5A7TJV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00490 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.3e-15
Identity = 50/79 (63.29%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISV--ADAARVLPKT-SSDHGVDYVDPYSIVYHKAKKT 60
          MKFQKI  +LIVCVVF IV S I +   DAAR+L +T   DH VD VDPYSI +HKAK +
Sbjct: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60

Query: 61 VSCWLGKLSSGPSPSGPGH 77
          V CWL  L SGPS  GPGH
Sbjct: 61 VKCWLENLGSGPSLKGPGH 79

[Close]

BLAST of CaUC07G138870 vs. ExPASy TrEMBL
Match: A0A2P2J3U6 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.8e-11
Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 1  MKFQKITTILIVCVVFSIVLSQISVADAARVLPKTSSDHGVDYVDPYSIVYHKAKKTVSC 60
          M FQK+ T+ +V V+   +LSQ+ V +AAR LP+  +  G  +++ YS VY KAK T++C
Sbjct: 1  MSFQKVATLFLVFVISLAILSQVKV-EAARALPEDFA--GAAHLETYSSVYEKAKNTMAC 60

Query: 61 WLGKLSSGPSPSGPGH 77
          WLG+L+SGPSP GPGH
Sbjct: 61 WLGRLASGPSPKGPGH 73

The following BLAST results are available for this feature:

BLAST of CaUC07G138870 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018440.1	2.7e-24	80.26	hypothetical protein SDJN02_20308, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KGN53025.1	1.3e-23	74.07	hypothetical protein Csa_015299 [Cucumis sativus]	[more]
KAA0043548.1	2.1e-16	62.34	hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa]	[more]
TYK02483.1	4.6e-16	61.04	hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa]	[more]
KAA0043550.1	6.7e-15	63.29	hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa]	[more]

BLAST of CaUC07G138870 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC07G138870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTV4	6.5e-24	74.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011720 PE=4 SV=1	[more]
A0A5A7TL44	1.0e-16	62.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BS33	2.3e-16	61.04	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TJV8	3.3e-15	63.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A2P2J3U6	2.8e-11	51.32	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]

BLAST of CaUC07G138870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37245:SF4	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 1..76
IPR040273	PAMP-induced secreted peptide 1	PANTHER	PTHR37245	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G138870.1	CaUC07G138870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response