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CaUC07G138560 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAAAAAGCTCATCAAACCAAAGACAATCACAAGACCAACTCTTCTTTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAACTCAATTCTTTCAAACGCCATCTTGACTCTGCCATAGCATCAAGAACTTTCTCCATGCCTCACTTATCCTCCGACGACCACCGAGCTCCGTTCCCGTTCCCGACCCCGACTCCACCACCGCCTCGCCCTTGTGTCCCAATGACAATGCCCATGTCCAAGGCTTCTTCCAAGTTCTCTCGGTCGCTCTCCAAAATTCTCCGCTCTCTTTTTCGACCAAAACCTAATTCCAACGCCTCGATTTTTCGGGCTCAAGATCAACCCAAAGACGGATTTTACGTCTTCTATGAAGTCGGGTCTCTCTCGACCATCCCTGAAGTCCCCGAGGCCGACTTTGGAGCTGGTCTTTCGCCGGAGATTAGCTCTTTGGTGAATAAGACGACTTCTGAGAGGTTCACGCCTAACTCCCTTGGCATCTCATGTGTGCTTTGAATATTTGAATATTGTTTTTATTTAAGTTAATTAAACCCTAGATATTACTATATATATATATATATATATATATATATATATATATATATAGTTAGCTTCATTAGAGATTATATATATATGTGGTTCATATATATGTATGTTCATATGTACACTCCTTTCCCTTTTTGTTTTCTTGTAATTTTTCTTTTTAATGTTTAGGGATGATACTGTTGCAGCTTAAGCTTGCAAACGTTTAAATATCTTATGCCTCTTTCTCTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTGGTAATTTTGTTTCAAAATAATATCTTTTTGTATGCATGCTTTGTCTCTGTTTGTATATGGCAATAGAAATAAGCTTCATCAGAGAGGCTTAATTTTTTCTTCTCCCAGTTTGTGAATTATATTTGGAAGTTAATTTCCCATTTTTCTTATTTAATATATGATCTAGTCTACAAGATTACTTGA ATGGAAAAAAAAGCTCATCAAACCAAAGACAATCACAAGACCAACTCTTCTTTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAACTCAATTCTTTCAAACGCCATCTTGACTCTGCCATAGCATCAAGAACTTTCTCCATGCCTCACTTATCCTCCGACGACCACCGAGCTCCGTTCCCGTTCCCGACCCCGACTCCACCACCGCCTCGCCCTTGTGTCCCAATGACAATGCCCATGTCCAAGGCTTCTTCCAAGTTCTCTCGGTCGCTCTCCAAAATTCTCCGCTCTCTTTTTCGACCAAAACCTAATTCCAACGCCTCGATTTTTCGGGCTCAAGATCAACCCAAAGACGGATTTTACGTCTTCTATGAAGTCGGGTCTCTCTCGACCATCCCTGAAGTCCCCGAGGCCGACTTTGGAGCTGGTCTTTCGCCGGAGATTAGCTCTTTGGTGAATAAGACGACTTCTGAGAGGTTCACGCCTAACTCCCTTGGCATCTCATTCTACAAGATTACTTGA ATGGAAAAAAAAGCTCATCAAACCAAAGACAATCACAAGACCAACTCTTCTTTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAACTCAATTCTTTCAAACGCCATCTTGACTCTGCCATAGCATCAAGAACTTTCTCCATGCCTCACTTATCCTCCGACGACCACCGAGCTCCGTTCCCGTTCCCGACCCCGACTCCACCACCGCCTCGCCCTTGTGTCCCAATGACAATGCCCATGTCCAAGGCTTCTTCCAAGTTCTCTCGGTCGCTCTCCAAAATTCTCCGCTCTCTTTTTCGACCAAAACCTAATTCCAACGCCTCGATTTTTCGGGCTCAAGATCAACCCAAAGACGGATTTTACGTCTTCTATGAAGTCGGGTCTCTCTCGACCATCCCTGAAGTCCCCGAGGCCGACTTTGGAGCTGGTCTTTCGCCGGAGATTAGCTCTTTGGTGAATAAGACGACTTCTGAGAGGTTCACGCCTAACTCCCTTGGCATCTCATTCTACAAGATTACTTGA MEKKAHQTKDNHKTNSSLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHLSSDDHRAPFPFPTPTPPPPRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPNSNASIFRAQDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVNKTTSERFTPNSLGISFYKIT Homology
BLAST of CaUC07G138560 vs. NCBI nr
Match: XP_011654341.1 (uncharacterized protein LOC105435347 [Cucumis sativus] >KGN53393.1 hypothetical protein Csa_014478 [Cucumis sativus]) HSP 1 Score: 267.3 bits (682), Expect = 9.2e-68 Identity = 142/173 (82.08%), Postives = 148/173 (85.55%), Query Frame = 0
BLAST of CaUC07G138560 vs. NCBI nr
Match: XP_008451959.1 (PREDICTED: uncharacterized protein LOC103493107 [Cucumis melo] >KAA0044891.1 putative inactive serine/threonine-protein kinase slob1 isoform X1 [Cucumis melo var. makuwa] >TYK16580.1 putative inactive serine/threonine-protein kinase slob1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 258.5 bits (659), Expect = 4.3e-65 Identity = 140/173 (80.92%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of CaUC07G138560 vs. NCBI nr
Match: XP_022942039.1 (uncharacterized protein LOC111447227 [Cucurbita moschata]) HSP 1 Score: 231.5 bits (589), Expect = 5.6e-57 Identity = 130/170 (76.47%), Postives = 134/170 (78.82%), Query Frame = 0
BLAST of CaUC07G138560 vs. NCBI nr
Match: KAG7031166.1 (hypothetical protein SDJN02_05206, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 231.5 bits (589), Expect = 5.6e-57 Identity = 130/170 (76.47%), Postives = 134/170 (78.82%), Query Frame = 0
BLAST of CaUC07G138560 vs. NCBI nr
Match: KAG6600527.1 (hypothetical protein SDJN03_05760, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 230.7 bits (587), Expect = 9.5e-57 Identity = 129/170 (75.88%), Postives = 134/170 (78.82%), Query Frame = 0
BLAST of CaUC07G138560 vs. ExPASy TrEMBL
Match: A0A0A0KV10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051450 PE=4 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 4.4e-68 Identity = 142/173 (82.08%), Postives = 148/173 (85.55%), Query Frame = 0
BLAST of CaUC07G138560 vs. ExPASy TrEMBL
Match: A0A5D3CYZ1 (Putative inactive serine/threonine-protein kinase slob1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004020 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 2.1e-65 Identity = 140/173 (80.92%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of CaUC07G138560 vs. ExPASy TrEMBL
Match: A0A1S3BTI3 (uncharacterized protein LOC103493107 OS=Cucumis melo OX=3656 GN=LOC103493107 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 2.1e-65 Identity = 140/173 (80.92%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of CaUC07G138560 vs. ExPASy TrEMBL
Match: A0A6J1FQ62 (uncharacterized protein LOC111447227 OS=Cucurbita moschata OX=3662 GN=LOC111447227 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 2.7e-57 Identity = 130/170 (76.47%), Postives = 134/170 (78.82%), Query Frame = 0
BLAST of CaUC07G138560 vs. ExPASy TrEMBL
Match: A0A6J1JF52 (uncharacterized protein LOC111486340 OS=Cucurbita maxima OX=3661 GN=LOC111486340 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 4.3e-55 Identity = 127/170 (74.71%), Postives = 131/170 (77.06%), Query Frame = 0
BLAST of CaUC07G138560 vs. TAIR 10
Match: AT5G41810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits to 690 proteins in 132 species: Archae - 0; Bacteria - 38; Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink). ) HSP 1 Score: 114.8 bits (286), Expect = 7.1e-26 Identity = 85/194 (43.81%), Postives = 115/194 (59.28%), Query Frame = 0
BLAST of CaUC07G138560 vs. TAIR 10
Match: AT5G41810.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). ) HSP 1 Score: 114.8 bits (286), Expect = 7.1e-26 Identity = 85/194 (43.81%), Postives = 115/194 (59.28%), Query Frame = 0
BLAST of CaUC07G138560 vs. TAIR 10
Match: AT1G64340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20 Identity = 71/160 (44.38%), Postives = 91/160 (56.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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