CaUC07G134540 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCCCGCTTATAATTTCAGTATGTAAGCTGCTTCACGCCATTTCTTGTCGATATTTTTGGAATCCCATAACTCTTTCTTTCTCTCCTTGTTTTCTGCTCTTTTATCTCCCGTTTTTGTGTCGTTCTGAACGGAATTTTCAGAACCCATTTTCATCTGCCTGTTCGTCTTCTTCTTCTTCAATTTCTTCCTCGAAGACCCTTTAATTTTGCTGCTCCTGGTTGGTTGTCTTGAGTACCATTTTAGATTTTGTCGATTTTCTGCTTGTTTTATGTTCTCTTTCAGCGGATTGCGTCTTCTTATTTGCTTGTTTGATGCTTACATGGGGTTAAATGCTTCTAATTCTGCTTAACTTTCTGGTAGTTGTAGTTTTGCTCTCTCTTTTTGTTTACTTCTGCTGTAATCTTGCTAGCGACCTACTAATCTCTGGCATATGGCTTCATCTTTCTGTGTACGGACTCTGTGTTTTGAAGATTCTATTTCTTTTTATCTTGTATTACTGCGGGTGAGTTTTTGGTTAAATCTGAAGTTTATAATGCTTGAATGAGGTCGGCTTGCTTTTGATTTTGACTATGTATCCTCCTCCTAAGTGGGCTGAAATATTGGACGACTTCTGCTTTTGAGTTGAAAGTTTTGATAAAAGTTCGCGTTCCTTTCTATTTTATGACATTTCATTGTTGTTCTGCCTTTTGGTTTCCTTATGTTTCCTGGTCAATATTGATCACCATTTTGTTTTGTTTTTAAGTTGTATCGTGCTTTTGAACTTCTGGTGTTTATTCATCAGAAGTCTTTATTAAGCTTTAGTTTGGATGCCTTTCTTTTAGGCAGGCGTTGTTTTCTGTGAGCTTTTTTTATCTTTTATTTTATTTATTTTTCTTATGTATGTTCTTTCATATATATATATACACACTTTTTTCTCAATGAAAGTTTGGTTATTCATTAAAAGAAAAGAGAAAAAAGAAACCTCTTCACCCTCTTGTTTTCATATCTTTCACACAATGTTTCTGTCAATCTCTGGTTACCTCAAACAAATCTCTATCTTCTGATACCCTTTGTCACAAGCAAGGTTTGGTGAATTATACTAAAATTTAAAATCTCTGCGGATTTTCATTTTAAGTGTGGATCTATTCAGCCTTTCGACTCTTTTTGTGATTTTCTACCGTATATGACTTGTTGGAGTGCCTTTCACCAAAAAAAAAAAGATAAAAAGCTTTGTAATCACAATACTCTGATAATTAACTTGGACTGTAAAAGTTAAATGTAATAGTTTTCTCCCATGGGGACTTTATCCACCCCTGATTGTCAGAGTTTATAACCCTTTTGTTTTGCTCGAAATACCCCGTTTTTCGTACAAAAATTTAACTTTAGAGCTAACTAGACTGGACCCTCCTCTTTGATCAACTTGCTTGCTTACTCACACTCTTCACATCTTATGCCCTTGTGATTAATTGTGAAAAATTTAGTTTATGTTAAAACTCAGATTCAGTACATAGTTTTTGTTTATCTTGTATTCTAAATAGATTTTCCTTCTTTAGCATGCCTGCTTATACACCATAGCTTCCTTCTTGTTTTATTTTTCCTTGATGTATCTTTTCGTATACCTTTGAGTATCCGGCCCAACTTGTGCCTTCAACTTTTTCCCTTCTCTATATACTTGTCGTGGGCAAGGTTGCTCGGTATTCTGACAGTTTATTTCGAGTCCAATTATAATTTTGTTTACGTTGTTACCCGACGTTACCACTACATGCTGTATTTTCTGAAAACTTATTCCATTTGGTAGAAGAGATTTATATGTGCCAGAATTTATAATTCCTCTTGGATGATTATTGCTGAAAGATCTCCTATCATAGTTGGTATTGAGAGATCTTAATTGGCAAATGAAATGTATAACCTGTTGGATTCTTGCCTTGCTCTATTGTTGAAGGTGATGTGTCTTTTATGTTCTCTGTCACTTGGGTTCCTTCATAAACAAGATTCTGAGTCTGAGAAAGCAAATGGAAAATGAAAACCTCAGCGATATTTGGTGTTGCTATGGTTTGGACATGACATGTAATGTAACTAAGGAAATGCATTACCCGAAGGTGGATCTCCAGCCTAAACATCCTCCTAAAATCTGATCCTGGAGCTTAGACCTAGATTTATCCACATGAGATTCCTCTCATATATCTTATTGACTATTATTTAAATTTGTTATGTGTTAAAATTTTACTCTCTTACATAACTATAGTTATTACTTCGTGCTCGTTTATGTTATCACAAGTCTACCTTCTTGTTTTGGTGTAGAACAGCCTAGTCCTTAACCTTGGCTCCCTTTTCCTGGTTATTTCTTTTCTTGAAGCATGAGAACGATGTCTGAGAAGATAACTGCTGAGGATCTTCTTAATAATATTTCTGAAGCTCTTGCTGAACATGGTCAAAAGGCAAAATCAGTATCGTTTTTTGGGGAAGATAATAAATCAAGTTCAGTGGCTGGTCAGATCAAGCGGATATTTGGACGCCAAAAGCCTGTTTACCATCTTCTTGGGGGTGGAAGATGTATATCCTTATTTTTGTATTCTTAAGTCTTTTTTCACCTTCTATAATCTTTTTCATGTCACAGATCATATTACTTCATTTTGATTTCTCTGCTGACCAAATATTTGTAGCTGCTGATGTGCTCCTATGGAGGAACAAGAAAATCTCAGCTAGTGTTTTGACCGGTGCAACTATTATATGGGTGCTTTTTGAATGGCTTAATTACCACTTCTTGACTCTTGTTTGCTTCGCTTTGGTTCTTGGTATGTTGGCTCAGTTTATATGGACAAATGCGTCAGGATTTCTGAACAGGTGATTGGAAATTGAATGTTTACGCCTTTGTTTTTCATTGACTTCTATGCACTTTCTGGTTTAATGTGCCGATGCATTCTGTAATATAATTTCATGGACTTGCAGATCATCGTCCAATGTTCCTCGCCTCGTTCTTCCTGAGGAACTATTTGTTAATATTGCTGTCTCGTTTGGTGCCGAGGTTAACCGAGCTCTCTGTTTTCTCCAAGATATTGCTTGTGAAGGAAATTTGAAACACTTCCTATTGGTATGCTAACATATTTCATATAATTTCTTTGCAATTCTGCTTTATTTCTAAATATCCTCAGCACTCTCTGCACTAGACATTCATATATGAGTATTTCAATACAAGATCTTGAAATTTGATAAAAAACAAGCATCGATTTTCGTCTCCTAGCTCGAAAATACTGATGTTAACATTATCATGGAGATCAATCTGAAAATGTCATTTGTGTAATAACAATTTTAAGTTAAATAAACTGCTTAAAACCATGAATTGTCTGTATCAATGAATGCCATTACTCAGCAATGAACATGAATGAATAAAGAAGAAATCTTAAATAGCCTCTCCATTTTTGAACTTGCTGCTGCTTCAGGAAGTGATATATGCTACTAATATTTTAGATCAGTAAATGTAATCTTTACTGACATGAATTTGAGAACAAATGTGAACACCAAAACATAGGACATATGAGAAATATGCTGGCTCAGTCTTGCAAGGATCCATACTATATTGAATGGAGTTTCTTTGATTATATCTCCTAGGAAACCTGTTAGATTGCTGCTTTGCCTTTCTGGTAGATGCTTCTTTAATGTAAATGTATTTCCAGGCTGTTGTAAGCTTGTGGGCTGGTGCTGTGATTAGTAGCTGGTGCAATTTCATAACTGTCTTGTATATTGGTAAGCGGTTACAGATTTTGCATCTCAAAACATTAACATGTTTAATTTCTTTGATGATTTCATTTACCTATAACCAATAAAGGGATTTATTGTGGGTTGATCTAATGTCAAAATATTAATCTACAGTCCTAGATGACCTTGAGGTATTTGATTCAAACTGTGATGGTTACTTATAACGACTTGAAAACTTTTAAAAATTAAACGTTGTAGGATTATATGATCGTGCAAAACTAGTTGAGAAGAGTGTAACTTGTCCCAAACAGTTGCAATTAACTAGTGGTAGTGTTTGAATTATCTTGCTTCTTTGTGGAAGCGATTTTGGCTATTTCATTTCGTTGATCTAATATAGGATGAGCTGTTTTCAGTGCTACACCCCTTGGAAAGTTAGATACACATTCACTGCTGATGCATATTTATTTTGAAATATAAAATATTGTAGGATGAGATTGTTGTTCAAAGAAATTAGTCAAGATGAGCAAAAATTGTTCCAAAACGAACAATAAAAGCATGATTAGTGAAAGTGTGAATTATCTTAGCTTCTTTGTGGGAGGGAGTTGGTTGTTTCATAAACAAAGGTAGGATAGGAACTTTTTGGTCATGGGAGATCCTATATTCCTTAGAAAATCTAAAACCATCCATCTTCACAACTACTAACACATTTCAAACATGTTCAGGTTTCGTTGCGGCCCATACACTTCCAATTCTGTATGAGAAATATGAAGATGAAGTCGACACCTTTGCATCCAAGGTCTTCGACCAGCTTTGCGGTCACTACCAGAAGTTCGATTCCAGCGTCCTTAGCAAGATCCCCAAGGGAGCTTTCAAGGGAAAGAAGTATGAATAGAGCATTTTCAACTCAGCAATGCCTAAACCAGCTCTAGATTTTGCAAGGAATTGGTTATGTATCATAAGAATGTGTTTTTATTCTCTCCTTTTATGGTAAAATGATAGAGACCAAGTGGTAGAAATGAATCCTTAGTTTTTAAGTTTGTATTTGCCAATTTGCTGAAATATGAACCTTCTTGGATTGATTTTTGAAGCCATTGGGTTCATTATTATAACTATTTCACATTCGTCGGAGGT GGCCCGCTTATAATTTCAGTATGTAAGCTGCTTCACGCCATTTCTTGTCGATATTTTTGGAATCCCATAACTCTTTCTTTCTCTCCTTGTTTTCTGCTCTTTTATCTCCCGTTTTTGTGTCGTTCTGAACGGAATTTTCAGAACCCATTTTCATCTGCCTGTTCGTCTTCTTCTTCTTCAATTTCTTCCTCGAAGACCCTTTAATTTTGCTGCTCCTGAACAGCCTAGTCCTTAACCTTGGCTCCCTTTTCCTGGTTATTTCTTTTCTTGAAGCATGAGAACGATGTCTGAGAAGATAACTGCTGAGGATCTTCTTAATAATATTTCTGAAGCTCTTGCTGAACATGGTCAAAAGGCAAAATCAGTATCGTTTTTTGGGGAAGATAATAAATCAAGTTCAGTGGCTGGTCAGATCAAGCGGATATTTGGACGCCAAAAGCCTGTTTACCATCTTCTTGGGGGTGGAAGATCTGCTGATGTGCTCCTATGGAGGAACAAGAAAATCTCAGCTAGTGTTTTGACCGGTGCAACTATTATATGGGTGCTTTTTGAATGGCTTAATTACCACTTCTTGACTCTTGTTTGCTTCGCTTTGGTTCTTGGTATGTTGGCTCAGTTTATATGGACAAATGCGTCAGGATTTCTGAACAGATCATCGTCCAATGTTCCTCGCCTCGTTCTTCCTGAGGAACTATTTGTTAATATTGCTGTCTCGTTTGGTGCCGAGGTTAACCGAGCTCTCTGTTTTCTCCAAGATATTGCTTGTGAAGGAAATTTGAAACACTTCCTATTGGCTGTTGTAAGCTTGTGGGCTGGTGCTGTGATTAGTAGCTGGTGCAATTTCATAACTGTCTTGTATATTGGTTTCGTTGCGGCCCATACACTTCCAATTCTGTATGAGAAATATGAAGATGAAGTCGACACCTTTGCATCCAAGGTCTTCGACCAGCTTTGCGGTCACTACCAGAAGTTCGATTCCAGCGTCCTTAGCAAGATCCCCAAGGGAGCTTTCAAGGGAAAGAAGTATGAATAGAGCATTTTCAACTCAGCAATGCCTAAACCAGCTCTAGATTTTGCAAGGAATTGGTTATGTATCATAAGAATGTGTTTTTATTCTCTCCTTTTATGGTAAAATGATAGAGACCAAGTGGTAGAAATGAATCCTTAGTTTTTAAGTTTGTATTTGCCAATTTGCTGAAATATGAACCTTCTTGGATTGATTTTTGAAGCCATTGGGTTCATTATTATAACTATTTCACATTCGTCGGAGGT ATGAGAACGATGTCTGAGAAGATAACTGCTGAGGATCTTCTTAATAATATTTCTGAAGCTCTTGCTGAACATGGTCAAAAGGCAAAATCAGTATCGTTTTTTGGGGAAGATAATAAATCAAGTTCAGTGGCTGGTCAGATCAAGCGGATATTTGGACGCCAAAAGCCTGTTTACCATCTTCTTGGGGGTGGAAGATCTGCTGATGTGCTCCTATGGAGGAACAAGAAAATCTCAGCTAGTGTTTTGACCGGTGCAACTATTATATGGGTGCTTTTTGAATGGCTTAATTACCACTTCTTGACTCTTGTTTGCTTCGCTTTGGTTCTTGGTATGTTGGCTCAGTTTATATGGACAAATGCGTCAGGATTTCTGAACAGATCATCGTCCAATGTTCCTCGCCTCGTTCTTCCTGAGGAACTATTTGTTAATATTGCTGTCTCGTTTGGTGCCGAGGTTAACCGAGCTCTCTGTTTTCTCCAAGATATTGCTTGTGAAGGAAATTTGAAACACTTCCTATTGGCTGTTGTAAGCTTGTGGGCTGGTGCTGTGATTAGTAGCTGGTGCAATTTCATAACTGTCTTGTATATTGGTTTCGTTGCGGCCCATACACTTCCAATTCTGTATGAGAAATATGAAGATGAAGTCGACACCTTTGCATCCAAGGTCTTCGACCAGCTTTGCGGTCACTACCAGAAGTTCGATTCCAGCGTCCTTAGCAAGATCCCCAAGGGAGCTTTCAAGGGAAAGAAGTATGAATAG MRTMSEKITAEDLLNNISEALAEHGQKAKSVSFFGEDNKSSSVAGQIKRIFGRQKPVYHLLGGGRSADVLLWRNKKISASVLTGATIIWVLFEWLNYHFLTLVCFALVLGMLAQFIWTNASGFLNRSSSNVPRLVLPEELFVNIAVSFGAEVNRALCFLQDIACEGNLKHFLLAVVSLWAGAVISSWCNFITVLYIGFVAAHTLPILYEKYEDEVDTFASKVFDQLCGHYQKFDSSVLSKIPKGAFKGKKYE Homology
BLAST of CaUC07G134540 vs. NCBI nr
Match: XP_038899522.1 (reticulon-like protein B8 isoform X1 [Benincasa hispida]) HSP 1 Score: 487.6 bits (1254), Expect = 6.3e-134 Identity = 243/250 (97.20%), Postives = 246/250 (98.40%), Query Frame = 0
BLAST of CaUC07G134540 vs. NCBI nr
Match: XP_038899528.1 (reticulon-like protein B8 isoform X2 [Benincasa hispida] >XP_038899535.1 reticulon-like protein B8 isoform X2 [Benincasa hispida] >XP_038899545.1 reticulon-like protein B8 isoform X2 [Benincasa hispida]) HSP 1 Score: 485.7 bits (1249), Expect = 2.4e-133 Identity = 242/249 (97.19%), Postives = 245/249 (98.39%), Query Frame = 0
BLAST of CaUC07G134540 vs. NCBI nr
Match: XP_016901194.1 (PREDICTED: reticulon-like protein B8 isoform X2 [Cucumis melo]) HSP 1 Score: 474.6 bits (1220), Expect = 5.5e-130 Identity = 234/252 (92.86%), Postives = 245/252 (97.22%), Query Frame = 0
BLAST of CaUC07G134540 vs. NCBI nr
Match: XP_008451843.1 (PREDICTED: reticulon-like protein B8 isoform X4 [Cucumis melo] >XP_008451844.1 PREDICTED: reticulon-like protein B8 isoform X4 [Cucumis melo] >XP_016901197.1 PREDICTED: reticulon-like protein B8 isoform X4 [Cucumis melo]) HSP 1 Score: 474.6 bits (1220), Expect = 5.5e-130 Identity = 234/252 (92.86%), Postives = 245/252 (97.22%), Query Frame = 0
BLAST of CaUC07G134540 vs. NCBI nr
Match: XP_016901193.1 (PREDICTED: reticulon-like protein B8 isoform X1 [Cucumis melo]) HSP 1 Score: 474.6 bits (1220), Expect = 5.5e-130 Identity = 234/252 (92.86%), Postives = 245/252 (97.22%), Query Frame = 0
BLAST of CaUC07G134540 vs. ExPASy Swiss-Prot
Match: Q9SS37 (Reticulon-like protein B8 OS=Arabidopsis thaliana OX=3702 GN=RTNLB8 PE=2 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.5e-82 Identity = 148/249 (59.44%), Postives = 189/249 (75.90%), Query Frame = 0
BLAST of CaUC07G134540 vs. ExPASy Swiss-Prot
Match: O82352 (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.6e-55 Identity = 109/241 (45.23%), Postives = 157/241 (65.15%), Query Frame = 0
BLAST of CaUC07G134540 vs. ExPASy Swiss-Prot
Match: Q6DBN4 (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 8.7e-54 Identity = 106/239 (44.35%), Postives = 154/239 (64.44%), Query Frame = 0
BLAST of CaUC07G134540 vs. ExPASy Swiss-Prot
Match: Q9SH59 (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 6.2e-52 Identity = 101/240 (42.08%), Postives = 152/240 (63.33%), Query Frame = 0
BLAST of CaUC07G134540 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.3e-49 Identity = 98/255 (38.43%), Postives = 153/255 (60.00%), Query Frame = 0
BLAST of CaUC07G134540 vs. ExPASy TrEMBL
Match: A0A1S3BT84 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 2.7e-130 Identity = 234/252 (92.86%), Postives = 245/252 (97.22%), Query Frame = 0
BLAST of CaUC07G134540 vs. ExPASy TrEMBL
Match: A0A1S4DYY0 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 2.7e-130 Identity = 234/252 (92.86%), Postives = 245/252 (97.22%), Query Frame = 0
BLAST of CaUC07G134540 vs. ExPASy TrEMBL
Match: A0A1S4DYZ3 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 2.7e-130 Identity = 234/252 (92.86%), Postives = 245/252 (97.22%), Query Frame = 0
BLAST of CaUC07G134540 vs. ExPASy TrEMBL
Match: A0A1S4DYY9 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103493007 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 2.7e-130 Identity = 234/252 (92.86%), Postives = 245/252 (97.22%), Query Frame = 0
BLAST of CaUC07G134540 vs. ExPASy TrEMBL
Match: A0A0A0KXG6 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G063430 PE=4 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 1.9e-128 Identity = 230/249 (92.37%), Postives = 242/249 (97.19%), Query Frame = 0
BLAST of CaUC07G134540 vs. TAIR 10
Match: AT3G10260.3 (Reticulon family protein ) HSP 1 Score: 308.9 bits (790), Expect = 3.7e-84 Identity = 149/251 (59.36%), Postives = 190/251 (75.70%), Query Frame = 0
BLAST of CaUC07G134540 vs. TAIR 10
Match: AT3G10260.1 (Reticulon family protein ) HSP 1 Score: 307.4 bits (786), Expect = 1.1e-83 Identity = 148/249 (59.44%), Postives = 189/249 (75.90%), Query Frame = 0
BLAST of CaUC07G134540 vs. TAIR 10
Match: AT3G10260.2 (Reticulon family protein ) HSP 1 Score: 307.4 bits (786), Expect = 1.1e-83 Identity = 148/249 (59.44%), Postives = 189/249 (75.90%), Query Frame = 0
BLAST of CaUC07G134540 vs. TAIR 10
Match: AT2G46170.1 (Reticulon family protein ) HSP 1 Score: 217.6 bits (553), Expect = 1.1e-56 Identity = 109/241 (45.23%), Postives = 157/241 (65.15%), Query Frame = 0
BLAST of CaUC07G134540 vs. TAIR 10
Match: AT3G61560.1 (Reticulon family protein ) HSP 1 Score: 211.8 bits (538), Expect = 6.2e-55 Identity = 106/239 (44.35%), Postives = 154/239 (64.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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